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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064676 ID=TCONS_00064676|Name=TCONS_00064676|organism=Clytia hemisphaerica|type=transcript|length=3803bp
AATTCACTtataataatttctttaaaaatcctTACTAAAAATCTGTAGTT
TGGTATAAAAATGGTAACACAAAATGTAAAGATCCCCAACTAAACTTTTT
AATATTCCTCACCAtggattcaaaatttccaatttcttAGCCACCAAGAG
AGGTAGAGATGTATGCTAgagatttttcttcaaatttataCAGGAAAAAA
AGACATAATAAAGGAGGTAAACAATGGTTTCATAAATGAGATGCAGCTCT
GGCACGGTACCAATGAAAAAGCCGCGTCTCTTATATGCCATCAATCATTT
GACCCACGCCTTGTGAAGAATTGTCTTTTTGGAGAGGGAGCTTACTTTTC
ATATTTACCCAATTATTCAATGAATTTGATCTATTCAAAGCCTGGTACAG
GAGAACTTTGTAATCTATTTTTGGCTGACGTTCTGGTTGGTTACTCCGCT
TTGGTAATTATGTTAATTACATACACTATTATATTACGCTTAAATCAGAA
CTATTCAATTTTCACATGAAGCTTTTTCGCTTGCGATTTCTTAGCACACG
GCAATTCTTGTTGCACCTATTTTACATTGACCtttcaattggtcaatttt
caactttaaaatgaaaaccgtgaaaacatgaaatttctttttctttcttt
ttataatttttccttttggtaagaattttaaaagcattttgaAATGGAAC
ACTAttttcctttttggacctacctcgtaggtcctttaaattaacctatG
TTTGTTTGTTCGTTTGTCTGTTATCTACTTTTCTCGGCATTAACTCATTA
GTTAAATAATTCTAGTATAAtcattaccttatcggccctttttacaccgg
cccttattccgTCACAGCctaattagggccgtaaataacgtCAAAACTTG
TGAAAATCGCTattcaggctttaaaacagtGAATATTatataaatttaca
ttaaaatgtcatctttctgcatcctttaatcatgcctaaaaccctttaaa
ttgagaaaaatggtcaaaatttaacACCACTTTTacataaaaattgcaaa
atgttggtatacaccggcccttattacgccacgagcccaaaaataacgcc
aatcgaaaagggccggcgtaagaagggtagtctgattcgcagacctatac
ttcctataGGAATACTATactttctataagaaactttttcgctagaggat
gagcagaagcctataaaaattaaaaagggccaatatatcattctttttaa
attttaattaattgatTAATTTCTACATTTTACAatgctttttacttttt
ttacgtTAATTCTCCAAATTAGTTCTCGTCAATATTAAAACGATTAAAAT
AAATTCACTTATCATTACAATTTCCTCAAAAACTCTTGCTAAAAATCTGT
AGTTTGGCATTAAAATGGTAgcaaaaaatgtagaaaaagatCCTCaacta
aacttttcaatattccTTACCATGgattcaaaatttcgaaatcaaCCTTT
TATTATGAATACTTCCATTCGTTATCACTCGAAGCTACGAAAAACCTGGT
ACCGTCATTGACATGGACCATTTAATGGCGGCAATTCCCGTCATTGGACG
TGCAAAGAAttagttttgtatttttatctTATATTTATCACTATTTTAAT
TAATtgattaaatttttacattcgaCAATGTATTTTACCTTTTTACGTTA
ATTTTCCAAATTAGTTCTCGTCAATATTAAAACGATTAAAATAAATTCAC
TTATCATTACAATTTCCTCAAAAACTCTTGCTAAAAATCTGTAGTTTGGC
ATTAAAATGGTAgcaaaaaatgtagaaaaagatCCTCaactaaacttttc
aatattccTTACCATGgattcaaaatttcgaaatcaaCCTTTTATCATGA
ATACTTCCATTCGTTATCACTCGAAGCTACGAAAAACCTGGTACCGTCAT
TGACATGGACCATTTAATGGCGGCAATTCCCGTCATTGGACGTGCAAAGA
AttagttttgtatttttatctTATATTTATCACTATTTTAATTAATtgat
taaatttttacattcgaCAATGTATTTTACCTTTTTACGTTAATTTTCCA
AATTAGTTCATCGTCAATGAAaaccagaaaattattttcttcaaaCAGCA
ATTGCTGGCAATGGTTAACATATtgcattaaatatttttttattttttca
acttgTCTGAAAAACCTTTGCCTAAAGAGTACATTAGCTTCCTTTACAAC
CAATCCAAgcaattttcaatgaattttGCTTTGGAAAAGACTTTAAAGCC
AAATTTAGTTTAATAGCTTTAAGACCATTGAGTATCGataattttcgcaa
atttaactGTGTATTTTTTTAGCTTTATCAACGAAGCAAAAAAGCTTTCG
ATTATATGTATTCGGTATGTAATATAGAGCTGTTTCGATTTTATTCTGTT
GTTTAATTTATTTTAGAACGTAATCGGTGAACTTCAACTCATCAACAACA
TGAGGGGAGAAATTGTAAGATTAACAAGGGAAAGAGATGTGAGATAATTT
TATTCCATTAACCCCGTTACTAAAGTCAATGGTCAAAAATTTAGAGAGCT
ATTTAAATAACTTTAATGCAGTTgttgttatatattttttgagaCCCCCC
ATCTCGTTGAGACCAGTGTTGTTGTAAGAGTGCCATTACTGCCAGTGTTG
GATTCAGCTCACCTCAGGCCAGTGGAGACTGTTTTCCAAACAAATATGCT
CATATAAAACATGTAATCaaagttttcaatgattttcttTCAGGTGTACC
CGTACACCAAATTCAATATACCGTGCGCTGCAAGAGGGCCAGACAACCCT
CACAGGTTGATCTTTATAGAGGTAAGtgcaattattatttttatctaaTC
CTTTAGCAACCAGGTTAACAGGCTTCTTTTAACTCCAGCCCCACCCTAAC
TAGGAGAGGTGGGTTGAGAAGCTTGTAAGATGAACATTATCTAGGATCTA
TcaaatttcttcccttttcTACTTTGGGCTTCGACAACGAAAGGAGACTT
ATATCTAATGAACCATAAACAAAATACAATTCCGGGACAATTTCTTTCAG
GCGGATTAAAATGTGGCTATTTTAAATTCATACCGAGTGATGACTTTTTC
TTCCTATGACATATGACCATTTCACACATGATAGATTTAATTCAAATTAT
CTGGAAatatactttcttttcaaatattttagtaTTTTACAGTACTTACT
GGTCTACATAATACACTTTTTTCTGAGGCTCAAATTCGGTAAAAAATAGG
CgtaatgctaagcatacctccaaACTCAAATGCAAATTCGTACAACTaaa
cgctgacctttttaggttacttttaaagctgtttgcaATTTCTTAGACCA
Atgattttcgcctgcggcgccaaatttagcctatctctatcccaacacgc
gattttttgatcactaacggtgtcgaggaaaaagccgtggtcgtctggta
caggctacgccaaattgcaaaaaaaggtttttctttaaGCTGAATCAATG
TTCCGACctcaaaattttcatgaaccCAAAGAAAATAGATAAATCTAAGT
CTAAGaatataaataagcataaattaaggctgaaaatcttGTTGCGTCAA
TTTCTTCAACGACGAACGCCTCCCTCAGTTCTGAAAATGTGTCTCAAAAG
TAGTTTGGCAGTTCAGCATTTAAAGCTATACTAAAATGCAATAcactgtt
gaaaagatatttccgagaaaaataatctaaagtaaaaagcccgggggggg
ggg Run BLAST on NCBI protein sequence of TCONS_00064676-protein >TCONS_00064676-protein ID=TCONS_00064676-protein|Name=TCONS_00064676-protein|organism=Clytia hemisphaerica|type=polypeptide|length=118bp
MLEIFLQIYTGKKDIIKEVNNGFINEMQLWHGTNEKAASLICHQSFDPRL
VKNCLFGEGAYFSYLPNYSMNLIYSKPGTGELCNLFLADVLVGYSALVIM
LITYTIILRLNQNYSIFT Run BLAST on NCBI transcript from alignment at scaffold_420:55158..58960 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064676 ID=TCONS_00064676|Name=TCONS_00064676|organism=Clytia hemisphaerica|type=transcript|length=3803bp|location=Sequence derived from alignment at scaffold_420:55158..58960 (Clytia hemisphaerica)
cccccccccccgggctttttactttagattatttttctcggaaatatctt
ttcaacagtgTATTGCATTTTAGTATAGCTTTAAATGCTGAACTGCCAAA
CTACTTTTGAGACACATTTTCAGAACTGAGGGAGGCGTTCGTCGTTGAAG
AAATTGACGCAACaagattttcagccttaatttatgcttatttatattCT
TAGACTTAGATTTATCTATTTTCTTTGggttcatgaaaattttgagGTCG
GAACATTGATTCAGCttaaagaaaaacctttttttgcaatttggcgtagc
ctgtaccagacgaccacggctttttcctcgacaccgttagtgatcaaaaa
atcgcgtgttgggatagagataggctaaatttggcgccgcaggcgaaaat
caTTGGTCTAAGAAATtgcaaacagctttaaaagtaacctaaaaaggtca
gcgtttAGTTGTACGAATTTGCATTTGAGTttggaggtatgcttagcatt
acGCCTATTTTTTACCGAATTTGAGCCTCAGAAAAAAGTGTATTATGTAG
ACCAGTAAGTACTGTAAAAtactaaaatatttgaaaagaaagtatatTTC
CAGATAATTTGAATTAAATCTATCATGTGTGAAATGGTCATATGTCATAG
GAAGAAAAAGTCATCACTCGGTATGAATTTAAAATAGCCACATTTTAATC
CGCCTGAAAGAAATTGTCCCGGAATTGTATTTTGTTTATGGTTCATTAGA
TATAAGTCTCCTTTCGTTGTCGAAGCCCAAAGTAgaaaagggaagaaatt
tgATAGATCCTAGATAATGTTCATCTTACAAGCTTCTCAACCCACCTCTC
CTAGTTAGGGTGGGGCTGGAGTTAAAAGAAGCCTGTTAACCTGGTTGCTA
AAGGAttagataaaaataataattgcaCTTACCTCTATAAAGATCAACCT
GTGAGGGTTGTCTGGCCCTCTTGCAGCGCACGGTATATTGAATTTGGTGT
ACGGGTACACCTGAaagaaaatcattgaaaactttGATTACATGTTTTAT
ATGAGCATATTTGTTTGGAAAACAGTCTCCACTGGCCTGAGGTGAGCTGA
ATCCAACACTGGCAGTAATGGCACTCTTACAACAACACTGGTCTCAACGA
GATGGGGGGtctcaaaaaatatataacaacAACTGCATTAAAGTTATTTA
AATAGCTCTCTAAATTTTTGACCATTGACTTTAGTAACGGGGTTAATGGA
ATAAAATTATCTCACATCTCTTTCCCTTGTTAATCTTACAATTTCTCCCC
TCATGTTGTTGATGAGTTGAAGTTCACCGATTACGTTCTAAAATAAATTA
AACAACAGAATAAAATCGAAACAGCTCTATATTACATACCGAATACATAT
AATCGAAAGCTTTTTTGCTTCGTTGATAAAGCTAAAAAAATACACagtta
aatttgcgaaaattatCGATACTCAATGGTCTTAAAGCTATTAAACTAAA
TTTGGCTTTAAAGTCTTTTCCAAAGCaaaattcattgaaaattgcTTGGA
TTGGTTGTAAAGGAAGCTAATGTACTCTTTAGGCAAAGGTTTTTCAGAca
agttgaaaaaataaaaaaatatttaatgcaATATGTTAACCATTGCCAGC
AATTGCTGtttgaagaaaataattttctggttTTCATTGACGATGAACTA
ATTTGGAAAATTAACGTAAAAAGGTAAAATACATTGtcgaatgtaaaaat
ttaatcaATTAATTAAAATAGTGATAAATATAagataaaaatacaaaact
aaTTCTTTGCACGTCCAATGACGGGAATTGCCGCCATTAAATGGTCCATG
TCAATGACGGTACCAGGTTTTTCGTAGCTTCGAGTGATAACGAATGGAAG
TATTCATGATAAAAGGttgatttcgaaattttgaatcCATGGTAAggaat
attgaaaagtttagttGAGGatctttttctacattttttgcTACCATTTT
AATGCCAAACTACAGATTTTTAGCAAGAGTTTTTGAGGAAATTGTAATGA
TAAGTGAATTTATTTTAATCGTTTTAATATTGACGAGAACTAATTTGGAA
AATTAACGTAAAAAGGTAAAATACATTGtcgaatgtaaaaatttaatcaA
TTAATTAAAATAGTGATAAATATAagataaaaatacaaaactaaTTCTTT
GCACGTCCAATGACGGGAATTGCCGCCATTAAATGGTCCATGTCAATGAC
GGTACCAGGTTTTTCGTAGCTTCGAGTGATAACGAATGGAAGTATTCATA
ATAAAAGGttgatttcgaaattttgaatcCATGGTAAggaatattgaaaa
gtttagttGAGGatctttttctacattttttgcTACCATTTTAATGCCAA
ACTACAGATTTTTAGCAAGAGTTTTTGAGGAAATTGTAATGATAAGTGAA
TTTATTTTAATCGTTTTAATATTGACGAGAACTAATTTGGAGAATTAacg
taaaaaaagtaaaaagcatTGTAAAATGTAGAAATTAatcaattaattaa
aatttaaaaagaatgatatattggccctttttaatttttataggcttctg
ctcatcctctagcgaaaaagtttcttatagaaagtATAGTATTCCtatag
gaagtataggtctgcgaatcagactacccttcttacgccggcccttttcg
attggcgttatttttgggctcgtggcgtaataagggccggtgtataccaa
cattttgcaatttttatgtAAAAGTGGTgttaaattttgaccatttttct
caatttaaagggttttaggcatgattaaaggatgcagaaagatgacattt
taatgtaaatttatatAATATTCactgttttaaagcctgaatAGCGATTT
TCACAAGTTTTGacgttatttacggccctaattagGCTGTGAcggaataa
gggccggtgtaaaaagggccgataaggtaatgaTTATACTAGAATTATTT
AACTAATGAGTTAATGCCGAGAAAAGTAGATAACAGACAAACGAACAAAC
AAACataggttaatttaaaggacctacgaggtaggtccaaaaaggaaaaT
AGTGTTCCATTtcaaaatgcttttaaaattcttaccaaaaggaaaaatta
taaaaagaaagaaaaagaaatttcatgttttcacggttttcattttaaag
ttgaaaattgaccaattgaaaGGTCAATGTAAAATAGGTGCAACAAGAAT
TGCCGTGTGCTAAGAAATCGCAAGCGAAAAAGCTTCATGTGAAAATTGAA
TAGTTCTGATTTAAGCGTAATATAATAGTGTATGTAATTAACATAATTAC
CAAAGCGGAGTAACCAACCAGAACGTCAGCCAAAAATAGATTACAAAGTT
CTCCTGTACCAGGCTTTGAATAGATCAAATTCATTGAATAATTGGGTAAA
TATGAAAAGTAAGCTCCCTCTCCAAAAAGACAATTCTTCACAAGGCGTGG
GTCAAATGATTGATGGCATATAAGAGACGCGGCTTTTTCATTGGTACCGT
GCCAGAGCTGCATCTCATTTATGAAACCATTGTTTACCTCCTTTATTATG
TCTTTTTTTCCTGtataaatttgaagaaaaatctcTAGCATACATCTCTA
CCTCTCTTGGTGGCTaagaaattggaaattttgaatccaTGGTGAGGAAT
ATTAAAAAGTTTAGTTGGGGATCTTTACATTTTGTGTTACCATTTTTATA
CCAAACTACAGATTTTTAGTAaggatttttaaagaaattattataAGTGA
ATT Coding sequence (CDS) from alignment at scaffold_420:55158..58960 >TCONS_00064676 ID=TCONS_00064676|Name=TCONS_00064676|organism=Clytia hemisphaerica|type=CDS|length=357bp|location=Sequence derived from alignment at scaffold_420:55158..58960 (Clytia hemisphaerica)
TCATGTGAAAATTGAATAGTTCTGATTTAAGCGTAATATAATAGTGTATG
TAATTAACATAATTACCAAAGCGGAGTAACCAACCAGAACGTCAGCCAAA
AATAGATTACAAAGTTCTCCTGTACCAGGCTTTGAATAGATCAAATTCAT
TGAATAATTGGGTAAATATGAAAAGTAAGCTCCCTCTCCAAAAAGACAAT
TCTTCACAAGGCGTGGGTCAAATGATTGATGGCATATAAGAGACGCGGCT
TTTTCATTGGTACCGTGCCAGAGCTGCATCTCATTTATGAAACCATTGTT
TACCTCCTTTATTATGTCTTTTTTTCCTGtataaatttgaagaaaaatct
cTAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064676-exon-scaffold_420-1491911889:55158..58960 | TCONS_00064676-exon-scaffold_420-1491911889:55158..58960 | Clytia hemisphaerica | exon |
| TCONS_00064676-exon-scaffold_420-1510915933:55158..58960 | TCONS_00064676-exon-scaffold_420-1510915933:55158..58960 | Clytia hemisphaerica | exon |
| TCONS_00064676-exon-scaffold_420-1575043694:55158..58960 | TCONS_00064676-exon-scaffold_420-1575043694:55158..58960 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:55158..58960 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012317 | Poly(ADP-ribose)pol_cat_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003950 | NAD+ ADP-ribosyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003950 |
NAD+ ADP-ribosyltransferase activity |
Blast
The following BLAST results are available for this feature:
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