TCONS_00064674 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064674
Unique NameTCONS_00064674
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1211

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064674 ID=TCONS_00064674|Name=TCONS_00064674|organism=Clytia hemisphaerica|type=transcript|length=1211bp
AAATCACTTGTTACAGTTCTGAGACTTCTAATTTTTTGTTCAGTTCAAGT
GCTAGGAACTTTTGtggaaaatatttaaaaagtaaaCATGTCATTTCGTG
AAACCTCAACCATGATTTCAGACTTTGTGCTGAGTGCCACATGCTTTTTA
GCAGGCACAGGGCGTATCAGCAAACTAAGGAATTTCTCTTGGCGAGAATT
TGGTATCTCCTGGTTTGGTATGATTGGGTTTTCTGTCATTGGCTTTGCTG
CTTTTCTTGGTGTGTTGAGGTTTGGTTACATTTTCCCAAGAAGACATTAC
AGTTTGAAAGATTGGCATCGTTATTTCTCTGACCTTGGTTCAATGTTTGG
TTTACCAATGTTGGCAGCAGCTTTCACTCAACGAACAGAATGGCAAAATC
TATGCTGGCTCTTCCTCTTTGTCTCTCTCATTTCCATTCTCCTACATTGT
GTTGAAGCTTTACATCTAGCTGTCCGTGATTTCTGTGCCGCTATGTCCGT
ATTATTTATCCTCTTTTCCGGTATTTTTATGGATTACCGTGGTGTTACTA
ACCGGTACAGTGTTGCTGGGTCTGTCAGCTTCATTTTGGCGACTCTAGTG
TCCACTCAAGGACGTGGCATCTTTGGTGTTAAAAATGTTGATTGGTTCCA
TTATCTACTGGCTATCGGTGTTTATTGTTGGGCTGAAGCTCTCATGTTGT
AGATTCTTCACTGAGAAATCTCTGATgcgttttataaaaattgaacacAG
TGGCtttaatcgattttatcttTGGATTGAATGAACATGCATGGTGAAAT
TCACTGGAAAAGATTATTTGTGATACACACTTCCTTCAAATTACACGACA
TTGACTCAAATGTTATCGATATTGAAACACTCAAAACGAGGACCATATGG
CTTTTTCAATGCTCTTGTGACCGAATAAAACATTTTACACGATAATTTAA
TACTGATTAAAGAATTCAGCTGGGTGATATCTAACGTacattgatttgaa
aatattgacaacgattttagttttagatttttttttttttttttttttac
aaaataatcataATTTTAAGTAGGGTAATTCTTTATGCATTTAGTAGTTG
ATTAGATAATGAAAACTTTTAGTATATAATGTAAACTTTTAAACATTTTG
ATCAGTTTTGTCTACACTTTCAGTTCAATTCTTCTCTCACCCACACTTTG
GGCAAAtcttg
Run BLAST on NCBI

protein sequence of TCONS_00064674-protein

>TCONS_00064674-protein ID=TCONS_00064674-protein|Name=TCONS_00064674-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
MSFRETSTMISDFVLSATCFLAGTGRISKLRNFSWREFGISWFGMIGFSV
IGFAAFLGVLRFGYIFPRRHYSLKDWHRYFSDLGSMFGLPMLAAAFTQRT
EWQNLCWLFLFVSLISILLHCVEALHLAVRDFCAAMSVLFILFSGIFMDY
RGVTNRYSVAGSVSFILATLVSTQGRGIFGVKNVDWFHYLLAIGVYCWAE
ALML
Run BLAST on NCBI

transcript from alignment at scaffold_420:273525..287386-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064674 ID=TCONS_00064674|Name=TCONS_00064674|organism=Clytia hemisphaerica|type=transcript|length=13862bp|location=Sequence derived from alignment at scaffold_420:273525..287386- (Clytia hemisphaerica)
AAATCACTTGTTACAGTTCTGAGACTTCTAATTTTTTGTTCAGTTCAAGT GCTAGGAACTTTTGGTAAGTCTTCAATATTTTTAGCCAGAAATGCATTTA CTATCAACCTTCTTCTGTGATGTTTGAATAATCATGCTTGGCCCAGTTTC TGACTGTCTGAATGTTCTTGGGATATAATCCCTTATAGAGGGGGGTACCC AGTGCACGAACGGCAAACTTATTTTTCTCTTTTCTGACTTACTTTTGGTT TTTACATAAATCCTTTTTGACCATCTCGTAAACAAGCTTGAAGTCCTTCT TTCAGTTTGTTTTCACTTTATTTGAAGGCTTCTTCTTGGAGTATTAAGTC GTTAAAGTGCGCACTATTCGGACCCAGTCCGCGAACGAGGAACCAGTGCG CGAACGATCTTTTGAAAGAAAAAATTAGAGCTCCGCTCGCAGGTAATACT TTAACTCTCTTCCGAGATGATACAGGGGTATTTTAACTTTTCAAAACCAC GTGCTTTTTCACCAAAATAGTGTCTTTTTTATAAGAACTTTAGCGTTTCA CTATACTAACCTGTTTATTTTTGTAAATATTTTCTTGTCGTCCATTTTTT TGTTTTCTTTTTCAAGTTTTGCTCATCGAAAAGCGCAGCAATGCTGTGTC TTCTTTTTTAATTGAGATCGCCAGCGCTTTCGAATGTTTTGACGTTGCAA TGTCTTCATTTTGAATATGGTGTTCGGATCGTTCGCGGACTGGAACCTTT TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAACTACTGGTGA TATGTTTCTATTGATTTTGAATTAATGAGCTAACATGTTTCAATGAAATT TTGTGTGATGGAAGATAACAGGTTTTTAAAAGAGGAAAGTCATAGTCAGA ACTCTTCTTGCGCAAATTTTCTTATAAAGAACATTTTCTCTCGCGATCAG CCATATTTACAAAAATCCTGAATTTCGTGATTTTTTTACTTGGCCTCGTT NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTGGTTGTTTTT TTCAAGTTCAAAGACGCTCGTTCGTGCACTGGGGCCGTTCGTGCACTGGT GATATGACTCTATATGGCACGAATGGCAGTCTAAGCTTGAAAACTCCCTG AACTAGGTATCAGATTAGAAACTAGGCTAGTCTTACAATACAATACAACA ATACAATACAATGCTGACAAATTGACACAACACATTGACAAGTAATCCTT GAGAGAAGTTTATATATCTGTATATCGAAATCTGCAACACAAAAACAAAA GTTGACTCTCCTACTAATTGGGTTCTCTCTCTCTGTCAGTCAGTTTTAGT GGAGGAAGTGCCTCGATTTTATACCAGACTGTACTAATCGAACGTTCAAT GGAGATCGAAGTAATCAATAATAATCGATAATAATTGAAGGTGATCAGGG ACCACTTATCTGGTTATTATCGATTCTATCGGTGATCAAATACTCACTCA ACTCCAAATTATGGCATTTTCTTTGACCATTTTCAATTCACAATTGGTTT GATCGTTTCGATTACTGTTCGATTACTTTCAATCACTTTCGATCATGTTG AATACCTTCAATTGTGTCGGATATGTTTCCTGTAGCAAAGCGACGAACAG TCAGTCAGGACCTCATTTCACTTTATCGATATTACGCAAACGGTAGTGTG CGCTAAATAATCTTGGTTTCGCTTTCGATTTCAAGCAAAGGTCTTAGCAA CAGGGCGCGCGTACATAGGAAACGGGGCTGGGTAGAAAAATCTAAACATA GAATTCAAAAAAAATACCGATCATTGTATAGAGCACTTAAAAATACCCCC TTTCTATTCTTAGATAATGAATAAAAGAGGTGCGCTTAGCTAAGCCGTGC TCGATTCGATTACTTTCAATCACTTTCGATCATGTTGAATACCTTCAATT GTGTCGGATATGTTTCCTGTAGCAAAGCGACGAACAGTCAGTCAGGACCT CATTTCACTTTATCGATATTACGCAAACGGTAGTGTGCGCTAAATAATCT TGGTTTCGCTTTCGATTTCAAGCAAAGGTCTTAGCAACAGGGCGCGCGTA CATAGAAACGGGGCTGGGTAGAAAAATCTAAACATAGAATTCAAAAAAAA TACCGATCATCGTATAGAGCACTAAAAAATACCCCCTTTCTATTCTTAGA TAATGAATAAGAGAGGTGCGCTTAGCTAAGCCGTGCTCGCGGGCGATAAA TTTATGTTTACTTATCTTGTATATTTTAGTGTTATTTATCCAATGAAAAG GATGTTGACAAAATATGCACAGGGCTGACAAAATATGCACGGCATTGATT ATGACATCATTAAATATGTCAAAGTCGATTCAACGCCCGTTAAAGAAAAT AATTTGTAGATAGTTCCTTTTCTCTTGAAATTTAGAAATACGAACAAAAA AAGATCAAATTTAATATTTGTTTCCTATCTAGATTATATTAGCGTTAGAG AATACGGTAAATTTTCACGAAAAATATTTTGCGATGGCGGTACGCCCAAT TGCGCCCACGGGAAAGTTCCAATTTTTAATTATCGGGAAATCGGAGAAAC CGGTTCACCACGTGGATAAAAAACGTACGGAATGAAACCTGACAGAAGGT TTCAACCAGATTTATTCAGATAAAGCTATAAGAGGTTCATTACTTGTGGA TTTTAAAACCTATATAAGCAAAAACGAAAGTTGTTGGGAAGGAAAGAGTA AACGCAAGACAGAAGGTTTGGTTGTGTTGATCAGGTATGTTTTTATTCTA TCCGAACTAATGTTAAAAAAGACCAAAGAGGTCCTGACTGGCGACGGAGG AATCTGAAACCGAGTTTATCTCGCCCAATGAAATATGAGACTGAGTTTAT TTTGTTCAATAAAAACACGCAATTTACGCGCGAAAACCACTTTCGCTTTC TTCGACCAATCAGAATGCGCAATATGGGTTATTTGAGAAAACCCAGGGTG AACATACTCAAATGGCGGGGAAGTACTGAAGGTGATTCTTATGGCTTCTT TTTGTGGTTTGATTTTAGGTCAATGTTTTTGGTTTTTACAAGGTATCTAC TACACTTTTTTTTTTTATAAGAACCAGTAAATTTTTGTTGAGGCTCGGCT GTTCTTATTTTTTTGGCACTTCGAGCCTCAAATTGTTCTTATCCTGTTCT TATTTTTAGGGCAAATTTGGGGGTATTTTTGGGTTTGAACCCTAATTTCA TTAATTTGGCCCTTATTTTACCTAAAACTCAGCAACTCCAGGCTCAGGAT TGTTCTTAAATTGTTCTTATTTTTTGGCACTTCGAGCCTCAAATTGTTCT TATCCTGTTCTTATTTTTAGGACAAATTTGGGGGGATTTTTGGGTTTGAA CCCTAATTTCATTAATTTGGCCCTTATTTTACCTAAAACTCAGCAACTCC AGGCTCAGGATTGTTCTTAAATTGTTCTTATTTTTTGGCATTTTTGAGCC TCATTGTTCTTATAAAATTGTTGTTATAAAAAAAAAAAGTTATCGAAGAA ATCACTGGTTATCGAAGTAATCAATTAGTTATTGAAGTTATCGAAAGTGA TCATTGACAATCAAAGTACTCAAACGGTTATTGAGCCATTGAAGGGTTGT TAAGAAAGTGATTGAAGACTCACAATTTTTCAAAATTTTGGTATACTCGA AATTTTGGTACTCAAAATTCGATTGTTAATCGGTAAATGGTCATTTGATT ACTTTGACCATTATCGATTACTTCGTCTGGTTTATAAGCATGTTCAAAGT TCACAATAACGACTTTCTTTTTATTACGGAAACCAAACAAGTGAGAACAA GTCATAAACTAAAAGTCAGCGCTCCGTGTTGTGACGTAGTTTACTAAATT GTTAAGATAAAATATTTTTAACAACTTTTTTCTGCATCATTTTTTTGAAG CCTCTTTGTAGGAGAATGTGTCTTTCTATAAGGAATTTTTATAACACTTC ATGACAGATTAAAAAGACAATCAGAAGACCTTCTTCGTTTTTCATTTTCG CATTTATGTGGAAGAATGAAATTTTCAGAAGATGCTTTATATATTCAATG TGAGGATTCAAATTTTCGTAAAATTTCGATTCTCCAAAATGATAGCTATG GGTAATTCCTTTGTCCTTTTGCTATTTTCTTTTAATCTGTGTGACGTAAA GACGCTTAATGAATTGAAGTACTTCCACTAACTGTCTGTGTTCCTTTGCA GTTGTTTATCAAATTTCCACCAGTACTAAGGTTGCAGAATTTTTTGAACG GCCCTTCTTTTTGGCACCCGTTTCCTCTTAGTCCTCCCACCCTTCATATA TTTGTTTCAATCCGTGATTCTAAGGCTTANNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGTT ATCGAAGTAATCAATTAGTTATTGAAGTTATCGAAAGTGATCATTGACAA TCAAAGTACTCGAACGGTTATTGAGCCATTGAAGGGTTGTTAAGAAAGTG ATTGAAGACTCACAATTTTTCGAAATTTTGGTATACTCGAAATTTTGGTA CTCGAAATTCGATTGTTAATCGGTAAATGGTCATTCGATTACTTTGACCA TTATCGATTACTTCGATAATCGAATTTATCGATTAGTACCGTCTGGTTTA TAAGCATGTTCAAAGTTCACAATAACGACTTTCTTTTTATTACGGAAACC AAACGAGTGAGAACAAGTCATAAACTAAAAGTCAGCGCTCCGTGTTGTGA CGTAGTTTACTAAATTGTTAAGATAAAATATTTTTAACAACTTTTTTCTG CATCATTTTTTTGAAGCCTCTTTGTAGGAGAATGTGTCTTTCTATAAGGA ATTTTTATAACACTTCATGACAGATTAAAAAGACAATCAGAAGACCTTCT TCGTTTTTCATTTTCGCATTTATGTGGAAGAATGAAATTTTCAGAAGATG CTTTATATATTCAATGTGAGGATTCAAATTTTCGTAAAATTTCGATTCTC CAAAATGATAGCTATGGGTAATTCCTTTGTCCTTTTGCTATTTTCTTTTA ATCTGTGTGACGTAAAGACGCTTAATGAATTGAAGTACTTCCACTAACTG TCTGTGTTCCTTTGCAGTTGTTTATCAAATTTCCACCAGTAAGGTTGCAG AATTTTTTGAACGGCCCTTCTTTTTGGCACCCGTTTCCTCTTAGTCCTCC CACCCTTCATATATTTGTTTCAATCCGTGATTCTAAGGCTTAAGTTTTTT CTCATCTTTAGTGTACTGAAGAAAGCGGTAATTTGATGCGAGAGTTAGAT TGTCAACAAAGTGCTGTAAAAAATCATTGAATAAAAGAAGAACTTAAAAT CTTAAATAATTTCATTTTGAAGAATACACCTTTCCCGTTATTCAAACTTC CCGGAAAAAATGTGCGCTCCACCGTTGTGTATAAAATTGTTTGGGAGGTA AACGAACACGCTTTTGCCTGCAAGAGTTTAGGGAAAGTGGGTTTTCAGCT TCTAACTAACTTTTGATAGCGATCTTTTTTTTGCAAAAAGTTTTCAAGGG CTGGTATAATAACATGTATAGAAAGAACATACTAAAATTTGAGGGGGTTT TGATCAATCCAGAACTTAAGAAAAGCTCAAAAAACCAATTTCCCCTAAGA AGACAATAGGCAAAAACACGAGGAGAGCATCAAAATAATGCGCGCGCATT TGTTTTGCGAATTACGGGAAAGGTGTAATTGGTGCAAAAAAGTGAAACAT AGAAAAGTTTCATTTTTCATTGCCTTAATCAAAATGGGGGATTTCAAATA TTTTTCATGTTTTTTTTTGCCCAAACTCCTTTAACTATGGGCAAGCACCC CCTTGGAATAGTATTGAAATATCAAAGATCCAGACCTAAAACCTATAACA ATCTTCTCATAGTAGGATCTGAATATTGGCTTAGATTGCNTAAAGTCCCT GAAAATTTGCTATATCAACAACAGACCCCCATAATTCCCAAAGATCCAGT CACTTTACAAGGGATTTACAGAGGGGCTACTGACAATTCCAGGCTTACAC AATGATTAGAAATTTGGATATTTTTCATTCCTGGGGTGGAAAATAATACT TTTCAATGATTTTCAAAACCTTAAAACGTTTTCTGGTGTAACCAGGGCCT TAATTATGTCTCACCAGCCTAGAAAAATCACACTTAAAAATTTTTTTGGC TTATTTTTCTCAAATCTGCTTATAGATCACATGGGTATTATTTTTGTTCC TGAAACTAGGCAACTTTCTCTACCAGGAACAATTAACAGTTTTTCCCAAC ATTAGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGGCTTAAATTTGTTAAAAAGTGAGTTTTTTTCCAT ATCTAGGCCGCCATTATGAAAAATGCGATTAAGGTCACATGGGTTTTTTT GGACTTTTTGACACTTTACTGGAATACTTTCAGAAAATCAAAAGAAACCC ATGTGACCTTAGTTGCAACTTGAAATATCTCCTCTCAAAGCCAGACTTTT ACACTTGGCAAAAATAGTCCAAAATTTCAACTTGCCCTCAAGCCGCCATT ATGGATTTTTGGGACCCAAAATTTTGGGATTCTGAGTTTTTCACTATTGT CTACCAAATATCCAAAAATGAAGGCAAACAAAATTTCATACTAACACCAC CCACCTGGTTCTTAGAGAATGTGGCTCTTAAGATGTTAGCTTGAAATAAA AATGAAACCACTGAAAACGAAAGTAAAATCAGCCTGTATTCGAAATCCCG TAATCTTGATATGCAAGTTTAAGTCTAAACTGTATGGCAGTCAGTCAGGA GTTTTTGACTAAATTAAGAAAGTATATATTTTACAATTTTCCCAAATTTC CTAATTAGGAAAGCAATGGGCCTTCAGGCCTGATGTTACTTAATTAATAT TAGATGGATATAGATAGGAAAGAAAAGAAAGAAAACTTTCCAAAATAGGA AAGTGAAACTATTTTCATAAATTTTTCAAAAAATACAAAAAGTCGCATGT TCCTGTAATTAGATAGATTCCAACCTCCTCTAGCAGTCTAGAGAAATTAA AAGTTTCAAGTTGTATTTCAAGCAGGGCCCTGGGATATTGCTTTTAGAAA AACATTAACCGAATAAAACCCTTTCTAAATGATGATACAGAAACAAAATT TCAAAATGTGTCCACGGGGCTTTAATGTAAAATTTCCTAACTAGGAAAGT TATTCCTTTTTAGATTTCATATTTTTTGCACATAGATCAATTTTGATTTA CTAAAAGTAAAACTAATGGTCATGGTTAGAATATAAGCGATTATGAAGTG ATTAGAAGAAGAGGTAACTTTTTTAAGCAATTTAATTAGAAAAGTTGGCA AATTCATAAAATACTTTCCTAATTAGGCAAAAACACCTGACTGATCGACT AACAGTTGGTCACACTAGCGTCCTGGTGAAATGGGTATCAAATATTAATG CTGCAAAAGTGCTTAAGATAACTTGATTTGCAAGCAAAAAAATGCGCCAC AAAAGCGATTCGAATGAGAAATAAACTGGCGCTTTTCTATGAAATTAACA TTTTCGAAAGCGATGAGAAATCATCTAAATTTGGACCATAGATGAAAAAA TTTGAACCAAGCCAACCTTGAAAACTGATTTGAAGAAACTTTTCAAGAAG AAGACTTAAGGGGAGTAAGACAACCACCTAGACCACCACTGGATAGGTTA TTTCCCAGAAATTTTACCGGACCTCAAACATTGACTAATTTACATGTGCG GAATTATTTGTACTTTAATGTATAATCAAGGCCCAAAAAATCCAAAGCGC TGTCTTGAGAATTGAATTACAAAATTTAGTTGATTAACTCTGCTGCATGT TTAGAAATCAGTCATTTTCATTTATTTATGCAAGTTCGCTAATTAATTGT CTTGTCTTAGATAGTGACTAACTTTATGGAAGTTTTCTAAAACATTGAAG CCATTCGGATTTTTTAACATTTTGGTATACTGTGTGAGCATATGATGGTA TAGATGTTTTTATTAATTCTCATTGTCACTCATACTCTTGTGGAGGCTGA CATGCATACAGCCCTCAAATGAATGACCTGGCTGGTCATTAAAATACAAA GTCAAAAATCAAAACAAACCTGATTTACAAAATTTACTGATTGTAAAATG TATATCTCCTTATCACAAAAGTGATGTCACCTTTCAGAAAATCAACAGGG GATAAGGACTCAAGCTTACCAAAGAAAATTTAATATATTATGTGGCAGAT TGTATACTTTCCTCACAGGATTATGTTATTGCCAAAAAAATGCTCTTTTG AGATTTCAAAAAGATCTGGCTGCTCCTAGATACAGTCAGAGATATCCTTG CAATTAGACAGGATTCAAATTGTGGCCAGTTTCAAATACAAATGGTACAT TGGTAGTGGCTAACAATGGGTAAAGATGAAAGCTACTGTAATACCCAGTG TAATTACATTATGTAAATGGATGAAATTGTGTTTCCAGAACATTGGATAG ATGAAATTTTTTTCCAATGTATCATTTTTTTTCTTACATATTTTAAGATT ATTTTAAAGAAGAAATGAAGTTGCGGTTACAATTTAGTATTGAAGGTCAA ATTAGCATGTTTTGCCCAAGACATCCCATCACATTTAAACTGGATATAGG AAACTGTTGAAAATGCACACCTCATGCAATTGCAAGAATGTGCTGGACTG AGATATCTTTATCTACAATCGGTGACAAAATACTTGGCACAAAAGGGAAA TCCACTGGGAAGTTTTGAAGCCACAATCGATTTGTAAGTGCTCTAAAGTA GGTTCGAAAGGTAGAGTTTTAACTCTGAGTTTTAACACTAGACTTAAGAC TTAAGACCTTAGGATCTGAGGATCTAAAAGCTCAAAAATGGTCCAGTAGG GCTTGAAATATAGCCTAGAAACCAATAAATCCCTCCCAGATCGAAATAAT CCATGAAATCAAGTTGAAGGCCTGAAATTGACATTCTCGCTCGAACTTCA ATTTTCGAAAAATGGTNGAAATCAAGTTGAAGGCCTGAAATTGACATTCT CGCTCGAACTTCAATTTTCGAAAAATGGTTAATTAGCCAAAAATGCCAAT GTGTTATGGCACTGATTGTAGTACAGTTCGAAAGGCTCCATTATGGATGT CATTGACAAAGGAAAGTTATTTTGTCTGAAGCTGTATGCAATTAAAAAAG TCCTCCTAAAGTATGATTTCAGCTCTGAAACACGACTTCTTAGCAGTTTC TGAGCTGAATACTGCTTGAGCTGAAATAATTTCTAATTCTCATTAACACC CATAGTAGATCCTAAAAGCCAAATACATTTACATTTAACTTTAAATATCT CGAAGTGAGTGGCTGAAATTAAAATAAAGACAAAACAAATAATTGGTTTC CAGTGAAAAGTAAGTGATGTAAGCCACATTTTTACTTGTTTAGCTCAATG TAGACCACTGAAAATGTTAATTTATATGAAAATTAAAGGTAATTCAAATG GAAAAAAAATTGTTCACCAGGCTTGATTCTACGACCAAATTGGTTGATTT CTAAAGCCCCTGATGCTGTCTCTTTTTAAAAGTTTTATTTGACAGTCACA AAAATGCTCATTAAAGGTTTCGTTTTTAAATAAGAATGATATTATTTGTT TACTCATCAATGTTAATTTACAAGCTTTTTGATATTGAATTAACACGAAT ATGGAGCAAGATTGGTCAGAAAGAAGAAAAGAAAAATGTTTTTTGCTTAT ATCAGCACAATATAGCAATGTTCAGACACTGTCCTGATATGAAGCATGTG TCTGATATGAAACAGGAACCTTTATGTAAAAATAAAACATATGTCTTTTT TGAAAAGTATGTCTTTTTAGCCCAATGATCCTTATTTTGAGGCCATCGTT TAATAAAGTTAAAAATTGCAGAAACTCGATCTTGGATAGAGTATTTTGGC CGGTATATATAGGACAGAAAAATCTCTGTTTACATAATATCAAGTTTTGG GGGTAACGGCAATCAAAATCAATTTTTAAAAAACAATGTTTCCAAGAGTT TGTTGTTTTTAAAGAAATGACCAATCGTTAAGAGTGTGTCTAGAAAGGTA TCCACATATTTTAAGCAACTGAAAAAATGACAACCCCTAAAAAGAAGAGG ATACAAGTGAGATACATTGTTGTTATCTTTGCCTGAAAATCTTTTCATTG TTTCAGAACTCTTTTGAACTCCTTAAAACTATGCTAATGCAATCTGCCGT AAAATGTAGGTAGAATGTCAACACCAACTATAGCAAGAAGGAAAAACCTT ACTTCGACCACTGAATAGATAGAATGTGATACACCAAGCAAGTTTGACAG CTAATCATACCCACATCTCAGGAATATCCACCACGGCAATTTCTTTGAAG CCACCACTGTAAAATACCAAAGACTGAAAATAGTTGTTTTAAATTCATTT AATTTTGGGATCCTTTGGAAAATTTTAATACTAATTTTTTCTTCTTTTAG TGGAAAATATTTAAAAAGTAAACATGTCATTTCGTGAAACCTCAACCATG ATTTCAGACTTTGTGCTGAGTGCCACATGCTTTTTAGCAGGCACAGGGCG TATCAGCAAACTAAGGAATTTCTCTTGGCGAGAATTTGGTATCTCCTGGT TTGGTATGATTGGGTTTTCTGTCATTGGCTTTGCTGCTTTTCTTGGTGTG TTGAGGTTTGGTTACATTTTCCCAAGAAGACATTACAGTTTGAAAGATTG GCATCGTTATTTCTCTGACCTTGGTTCAATGTTTGGTAAGTTAAAGGCCT TTCCTGAAAAGTTTCATTTTAAGTTTAAAACTCGGGAATTTATTCAAATT CATGATTCTGCCCTCCAATTTACCTCAACATCTCTTTCTGTTTCTCATCG ATGGTCTGGAGAATACATTTATTATAGTGTACAAGAAAAAACAAAATTTG AATTATAGTACTTCAAGTTTCATCTTTATCGAATCGTCAGCTATCAAATA AAAAATGACAAATGCTAATGATTTTATGTTGAAAATTTGATCGTAAAAAA ACATGTATAATTGGAATGAATCCCTAGGGTCATAAATACAAATGACGATA TTCTCTATAGACGTTTTATATGCTTGAAGATCAATCTTTAGACTTATAAT TTGCTAATAAAAATTTATTTTGATGGCTGTGTTTAGACCAGCCTGGCATT TGTAATTGCTTGCAGTAATCTTTTGAATTCTATTGGTCCGCGCAATTGTT CGGTTTGTCAAATGCCTAATGATGCCAGCGTGTTGGCATTTCGTTGGCAT TTTAAATGCCATTTTGAGCAAAGGAATCCCCTTTTCTGGCATTTCAAATC AAACAAAGGAACCAAAACAAAGAGAAAAAATGACATTTTTNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTTTTTCAAGGCTAAT TTCAGTTAGTACTAACTGTACTAAGTGTACCAAGGTGGTGGTGTTACTAA CTTCTTCCGAGAAAGCAGTTAGTAGGCATGATGTCTTTTACTAACTGCTT CACCCCCCCCCCTGGGTAATTCAAAATTTCGTATTTTTCATAAAGGCATA AATTGCAAGATTTGGACACATTTATTATATCACATAATTTTAGGCTTTTG ACCATCACGTCGAGTTTCATTGTCTTTGTAAACGCGAAGAAACTAAATGA TATAACATTTTTCATGTTTTATAATATCCTTCTTACTGTTCTTTTTGCAG GTTTACCAATGTTGGCAGCAGCTTTCACTCAACGAACAGAATGGCAAAAT CTATGCTGGCTCTTCCTCTTTGTCTCTCTCATTTCCATTCTCCTACATTG TGTTGAAGCTTTACATCTAGCTGTCCGTGATTTCTGTGCCGCTATGTCCG TATTATTTATCCTCTTTTCCGGTATTTTTATGGATTACCGTGGTGTTACT AACCGGTACAGTGTTGCTGGGTCTGTCAGCTTCATTTTGGCGACTCTAGT GTCCACTCAAGGACGTGGCATCTTTGGTGTTAAAAATGTTGATTGGTTCC ATTATCTACTGGCTATCGGTGTTTATTGTTGGGCTGAAGCTCTCATGTTG TAGATTCTTCACTGAGAAATCTCTGATGCGTTTTATAAAAATTGAACACA GTGGCTTTAATCGATTTTATCTTTGGATTGAATGAACATGCATGGTGAAA TTCACTGGAAAAGATTATTTGTGATACACACTTCCTTCAAATTACACGAC ATTGACTCAAATGTTATCGATATTGAAACACTCAAAACGAGGACCATATG GCTTTTTCAATGCTCTTGTGACCGAATAAAACATTTTACACGATAATTTA ATACTGATTAAAGAATTCAGCTGGGTGATATCTAACGTACATTGATTTGA AAATATTGACAACGATTTTAGTTTTAGATTTTTTTTTTTTTTTTTTTTTA CAAAATAATCATAATTTTAAGTAGGGTAATTCTTTATGCATTTAGTAGTT GATTAGATAATGAAAACTTTTAGTATATAATGTAAACTTTTAAACATTTT GATCAGTTTTGTCTACACTTTCAGTTCAATTCTTCTCTCACCCACACTTT GGGCAAATCTTG

Coding sequence (CDS) from alignment at scaffold_420:273525..287386-

>TCONS_00064674 ID=TCONS_00064674|Name=TCONS_00064674|organism=Clytia hemisphaerica|type=CDS|length=1230bp|location=Sequence derived from alignment at scaffold_420:273525..287386- (Clytia hemisphaerica)
GTTTACCAATGTTGGCAGCAGCTTTCACTCAACGAACAGAATGGCAAAAT
CTATGCTGGCTCTTCCTCTTTGTCTCTCTCATTTCCATTCTCCTACATTG
TGTTGAAGCTTTACATCTAGCTGTCCGTGATTTCTGTGCCGCTATGTCCG
TATTATTTATCCTCTTTTCCGGTATTTTTATGGATTACCGTGGTGTTACT
AACCGGTACAGTGTTGCTGGGTCTGTCAGCTTCATTTTGGCGACTCTAGT
GTCCACTCAAGGACGTGGCATCTTTGGTGTTAAAAATGTTGATTGGTTCC
ATTATCTACTGGCTATCGGTGTTTATTGTTGGGCTGAAGCTCTCATGTTG
TAGATGTCATTTCGTGAAACCTCAACCATGATTTCAGACTTTGTGCTGAG
TGCCACATGCTTTTTAGCAGGCACAGGGCGTATCAGCAAACTAAGGAATT
TCTCTTGGCGAGAATTTGGTATCTCCTGGTTTGGTATGATTGGGTTTTCT
GTCATTGGCTTTGCTGCTTTTCTTGGTGTGTTGAGGTTTGGTTACATTTT
CCCAAGAAGACATTACAGTTTGAAAGATTGGCATCGTTATTTCTCTGACC
TTGGTTCAATGTTTGGTTTACCAATGTTGGCAGCAGCTTTCACTCAACGA
ACAGAATGGCAAAATCTATGCTGGCTCTTCCTCTTTGTCTCTCTCATTTC
CATTCTCCTACATTGTGTTGAAGCTTTACATCTAGCTGTCCGTGATTTCT
GTGCCGCTATGTCCGTATTATTTATCCTCTTTTCCGGTATTTTTATGGAT
TACCGTGGTGTTACTAACCGGTACAGTGTTGCTGGGTCTGTCAGCTTCAT
TTTGGCGACTCTAGTGTCCACTCAAGGACGTGGCATCTTTGGTGTTAAAA
ATGTTGATTGGTTCCATTATCTACTGGCTATCGGTGTTTATTGTTGGGCT
GAAGCTCTCATGTTGTAGATGTCATTTCGTGAAACCTCAACCATGATTTC
AGACTTTGTGCTGAGTGCCACATGCTTTTTAGCAGGCACAGGGCGTATCA
GCAAACTAAGGAATTTCTCTTGGCGAGAATTTGGTATCTCCTGGTTTGGT
ATGATTGGGTTTTCTGTCATTGGCTTTGCTGCTTTTCTTGGTGTGTTGAG
GTTTGGTTACATTTTCCCAAGAAGACATTACAGTTTGAAAGATTGGCATC
GTTATTTCTCTGACCTTGGTTCAATGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040562XLOC_040562Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064674-proteinTCONS_00064674-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064674-exon-scaffold_420-1575043694:287323..287386TCONS_00064674-exon-scaffold_420-1575043694:287323..287386Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1575043694:275752..276036TCONS_00064674-exon-scaffold_420-1575043694:275752..276036Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1575043694:273525..274386TCONS_00064674-exon-scaffold_420-1575043694:273525..274386Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1510915933:287323..287386TCONS_00064674-exon-scaffold_420-1510915933:287323..287386Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1510915933:275752..276036TCONS_00064674-exon-scaffold_420-1510915933:275752..276036Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1510915933:273525..274386TCONS_00064674-exon-scaffold_420-1510915933:273525..274386Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1491911889:287323..287386TCONS_00064674-exon-scaffold_420-1491911889:287323..287386Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1491911889:275752..276036TCONS_00064674-exon-scaffold_420-1491911889:275752..276036Clytia hemisphaericaexon
TCONS_00064674-exon-scaffold_420-1491911889:273525..274386TCONS_00064674-exon-scaffold_420-1491911889:273525..274386Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:273525..287386 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
37.0711 36.5299 101.787 111.467 53.7168 39.4292 41.6064 46.4092 37.5346 31.5618 31.1727 22.8262 21.6406 20.1264 30.0372 28.9334 37.5839 31.3573 20.4753 21.2683 28.0029 25.6479 31.5844 31.4091 16.3844 18.8636 14.3708 11.6581 22.7934 20.8605
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064674 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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