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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064665 ID=TCONS_00064665|Name=TCONS_00064665|organism=Clytia hemisphaerica|type=transcript|length=870bp
GAAATTGATAGAAGTTCAACTTGGAGGGAACTCGAAGCGATCAGATTCGG
ATTGGATTCATTTTGCCATAAGTTAAGTAACTCTTCCATATCTTGGATGG
CAGATAATAGAGCAGCCATGTATGTTTCTTCAGGTGGTAGCAATAAGCCC
CATTTACAAGAATTAGCACTAAGAATCTACGAATTGTCTCGTAACTTTAA
TATAAATTTGGAAGTGAATTGGGTTCCTAGGGACGAGAACCGAGTAGCGG
ACAGAGTTTCTAAAATAATAGATCCAGACGACTGGGAAATCACAGAGGAA
ATTTTGCACTTTCTCGAACATCGTTGGGGTAACTTTACAGTCGACAAATT
CGCTAATTTTGACAATGCAAAATGCGAGAGGTTTAATTCCAAGTATGTTG
TGCCCGGTACAGAGGCTGTTGACGCCTTCACTCAAGACTGGCGCTTAGAG
CGAAATTTATTAGTTCCTCCTGTCAGTCAGATTCCTCAAGTCTTACGCCT
TTTAAAAAGCCAACCAGGAATTAAAGGGGTGCTCGTCATACCTTTTTGGA
CAGCGTCTTCTTTTTGGCCCCTTCTAAGAGAAGGGGatgaattttcatat
tttgtcaAGGATTACGTTATTTTCGAAGACACGTCGAACTTGTTACGCCT
TGGGAGGTACAAATACTCTTTACTCGGTTCTCCACGATATAGAGGACGTA
TCATAGCCTTAGAGGTTATTAGTTGATTCAGAAGGATAGTCCTTATCACC
TTATAGAAAGAAGCTGAATTAATTTTAACATGTATTTCTACACCCAAGGA
AAAGGGTGAGGCAGGGGTTGATTAGTGGTATCAACTGAGGCtatattaat
tttgaaatatattttctaCA Run BLAST on NCBI transcript from alignment at scaffold_420:45579..46524- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064665 ID=TCONS_00064665|Name=TCONS_00064665|organism=Clytia hemisphaerica|type=transcript|length=946bp|location=Sequence derived from alignment at scaffold_420:45579..46524- (Clytia hemisphaerica)
GAAATTGATAGAAGTTCAACTTGGAGGGAACTCGAAGCGATCAGATTCGG
ATTGGATTCATTTTGCCATAAGTTAAGTAACTCTTCCATATCTTGGATGG
CAGATAATAGAGCAGCCATGTATGTTTCTTCAGGTGGTAGCAATAAGCCC
CATTTACAAGAATTAGCACTAAGAATCTACGAATTGTCTCGTAACTTTAA
TATAAATTTGGAAGTGAATTGGGTTCCTAGGGACGAGAACCGAGTAGCGG
ACAGAGTTTCTAAAATAATAGATCCAGACGACTGGGAAATCACAGAGGAA
ATTTTGCACTTTCTCGAACATCGTTGGGGTAACTTTACAGTCGACAAATT
CGCTAATTTTGACAATGCAAAATGCGAGAGGTTTAATTCCAAGTATGTTG
TGCCCGGTACAGAGGCTGTTGACGCCTTCACTCAAGACTGGCGCTTAGAG
CGAAATTTATTAGTTCCTCCTGTCAGTCAGATTCCTCAAGTCTTACGCCT
TTTAAAAAGCCAACCAGGAATTAAAGGGGTGCTCGTCATACCTTTTTGGA
CAGCGTCTTCTTTTTGGCCCCTTCTAAGAGAAGGGGATGAATTTTCATAT
TTTGTCAAGGATTACGTTATTTTCGAAGACACGTCGAACTTGTTACGCCT
TGGGAGGTACAAATACTCTTTACTCGGTTCTCCACGATATAGAGGACGTA
TCATAGCCTTAGAGGTTATTAGTTGATTCAGAAGGATAGTCCTTATCACC
TTATAGAAAGAAGCTGAATTAATTTTAACATGTATTTCTACACCCAAGGA
AAAGGGTGAGGCAGGGGTTGATTAGTGGTATCAACTGAGGCTGTTTTAAT
TTTAACATGTATTTCTGCACCCAGAAGAAGGGTGAGGCAGAGGTTGATTA
GTGGTATCAACCAAGGCTATATTAATTTTGAAATATATTTTCTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064665-exon-scaffold_420-1575043694:45686..46524 | TCONS_00064665-exon-scaffold_420-1575043694:45686..46524 | Clytia hemisphaerica | exon |
| TCONS_00064665-exon-scaffold_420-1575043694:45579..45609 | TCONS_00064665-exon-scaffold_420-1575043694:45579..45609 | Clytia hemisphaerica | exon |
| TCONS_00064665-exon-scaffold_420-1510915933:45686..46524 | TCONS_00064665-exon-scaffold_420-1510915933:45686..46524 | Clytia hemisphaerica | exon |
| TCONS_00064665-exon-scaffold_420-1510915933:45579..45609 | TCONS_00064665-exon-scaffold_420-1510915933:45579..45609 | Clytia hemisphaerica | exon |
| TCONS_00064665-exon-scaffold_420-1491911889:45686..46524 | TCONS_00064665-exon-scaffold_420-1491911889:45686..46524 | Clytia hemisphaerica | exon |
| TCONS_00064665-exon-scaffold_420-1491911889:45579..45609 | TCONS_00064665-exon-scaffold_420-1491911889:45579..45609 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:45579..46524 - |
Blast
The following BLAST results are available for this feature:
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