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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064663 ID=TCONS_00064663|Name=TCONS_00064663|organism=Clytia hemisphaerica|type=transcript|length=2555bp
TTTTACTTTTAGTTTAGTGTGTTACAATGGCTGGCAATGGAGAACATATT
TGGtgaatatttttagaatttttttcaacttgtCTGAAAAAGCTTATGCC
TTACAGGGTACATTAGCTTCTTTTATAACCTATCCAAGCTATTTTCAATG
GATTTTGcttttgaaaagatttgaaagccaaatttagttttataGCTTTA
AAACCATGGAGTATCGATAATTTTAGCAAACTTAACTGTGTATTCGTTTA
GCTTTATCAGGCTTTCGAGTATATGTATTCGGTATGTAATATAGAACTGT
TTCcattttattcttttgtttgatttatTATAGAACGTAATCGGAGAACT
TCAATTAATAAATGACATGAGGGGAGAGATATTCAGATTGCGAAGAAAAA
GAGATGTGAGATAATTTTATTCCATTACCCCGTTACTAAAGTACATGGTC
AAAAATTCTATTATATGGAAAATCCGTTCACTTATGGTGCtcgcaaaatt
ttattttgcttGCTACTTGCATCACCTAGGTTTCCAGTTTGTAACAActg
aaattatttaaaaagatCATTTGGTACACAATAATTTCAAGTCTGTACAT
ACCTTATCAATTGGGGAGCTTCGGCTAGAGACTAAAAAGTTATTTCATTA
TTCTTTTCCTGTAGGACGCACAGAGGATAGCGGCAGAGCAAGCAGCCAAT
AATTTCAATCACGCGAAATTGGTAAGAACATGGTCCGTATAAGAAACAAG
ACCCTTCAAGACCCtcttgtttctttctattgttgcgAACTTGGACTTAC
GTTGAGGAGTATTTGATAATGTGATCAAAATCTgagcaaattgattttta
tatcgttattaacaaagaaaaaagtaaacaaagattacAAAAGGCTTCCG
GACCAGGATTTTTTATACGAGTATGGAAAGAATAANaaaaagtaaacaaa
aagttacaaaaggCTTCCGGACCAGGATTTTTTATACGAAGTATGGTAAG
TGTAAGTATTTTTTCTTATGACACGGGCAAGACACGCTACAAAAGCACAA
TGAACTTTATACAGTTTTTGTTTTATACCTAGAACCTAGTAATATACTCT
TTtggtgcttaattgtaggggggtcatttcgcaatttttggagaaaaaag
tTACCGCAATATCACATTATAATAATCCCCCTTTTTATGACCTATATGCT
ACGAAGTGCATACACTGCAACTGGACAGGCTGAATCAACTTCGACACCCT
GGTAAACATGGCAACGGCAACAAGGGTTCCATCTTGATTTTATCGTGTAA
AAAGTCgcaattcatttaaaaaaccTTAACAGCCTTTTTGGCCATTTCTT
ATTAAACTTTCCGCTACAAAATCCAGCCATCCGGAGCTTTATAAAGCTCT
TTCACGATAATAGGGCAGTAGTTGGAACTTTTCCTAACCGGAAATAACCT
TAATATCAGTTTATCTTTCTCTAAACCCCCCCTCAATTTTAAGACTATGT
AATTGAAAATCGCTCCGCCACTAACCactttttttcatcttaaaGTTAGC
TATGTCAATTTACCAGGAGAACTTGCAACTGCAGCTGGAGCTGCAGAATT
GGCAGGATCAGAGCTATATATAACTTTACTTCTATCAGTTAATTCTATTT
CatccaaatttgaaaaaaatcctaaatcTTACAGTTTACTTTATTATGTC
TATTTACCAGGAGATCATGCAGCTGCAGCAGGAGCTGCAGAATTGGCAGG
ATCAGTGCTATATAAAACTTCACCTCTATCAGGTAATTCTAtttcattca
aatttgaaaaaaaattccagatcTTACAGTTTACTTAATTATGTCTATTT
ACCAGGAGATCATGCAGCTGCAGCAGGAGCTGCAGAATTGGCAGGATCAG
TGCTATATAAAACTTCACCTCTATCAGGTAATTCTATTTCatccaaattt
gaaaaaaaattccaaatcataCAGTTTACTTAATTATGTGTATTTACCAG
GAGATCATGCAGTTGCAGCAGGAGCTGCAGAATTGGCAGGATCAGTGCTA
TATAAAACTTCACCTCTATCAGGTAATTCTATTTCatccaaatttgaaaa
aaaattccaaatcttACAGTTCACTTAATTATGTCTATTTACCAGGAGAT
CATGCAGCTGCAGCAGGAGCTGCAGAATTGGCAGGATCAGTGCTATATAA
AACTTCACCTCTATCAGgtaattctattttatttaaagttgaaaaaaaga
ATCCAAAATCTTACAGTTTACTTAATTATGTCTATTTACCAGGGAGAACT
TGCAACTGCATAAAGAGCTGCAGCATTGGCAGGATCAATGCCACATAAAT
CTACATTTATATCAGGAGAACTTGCAACTGCATAAAGAGCTGCAGCATTG
GCAGGATCAATGCCACATAAATCTACATTTATACCAGGTAATAAACccat
tttatttaaatttgaaaaaaagaatccAATATCTTACATGCTTTTTTTGT
CTCCAAGAACTACACACAGTCTAAgttcgaaaaaatataatttccactCT
TAATC Run BLAST on NCBI transcript from alignment at scaffold_420:40674..43306- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064663 ID=TCONS_00064663|Name=TCONS_00064663|organism=Clytia hemisphaerica|type=transcript|length=2633bp|location=Sequence derived from alignment at scaffold_420:40674..43306- (Clytia hemisphaerica)
TTTTACTTTTAGTTTAGTGTGTTACAATGGCTGGCAATGGAGAACATATT
TGGTGAATATTTTTAGAATTTTTTTCAACTTGTCTGAAAAAGCTTATGCC
TTACAGGGTACATTAGCTTCTTTTATAACCTATCCAAGCTATTTTCAATG
GATTTTGCTTTTGAAAAGATTTGAAAGCCAAATTTAGTTTTATAGCTTTA
AAACCATGGAGTATCGATAATTTTAGCAAACTTAACTGTGTATTCGTTTA
GCTTTATCAGGCTTTCGAGTATATGTATTCGGTATGTAATATAGAACTGT
TTCCATTTTATTCTTTTGTTTGATTTATTATAGAACGTAATCGGAGAACT
TCAATTAATAAATGACATGAGGGGAGAGATATTCAGATTGCGAAGAAAAA
GAGATGTGAGATAATTTTATTCCATTACCCCGTTACTAAAGTACATGGTC
AAAAATTCTATTATATGGAAAATCCGTTCACTTATGGTGCTCGCAAAATT
TTATTTTGCTTGCTACTTGCATCACCTAGGTTTCCAGTTTGTAACAACTG
AAATTATTTAAAAAGATCATTTGGTACACAATAATTTCAAGTCTGTACAT
ACCTTATCAATTGGGGAGCTTCGGCTAGAGACTAAAAAGTTATTTCATTA
TTCTTTTCCTGTAGGACGCACAGAGGATAGCGGCAGAGCAAGCAGCCAAT
AATTTCAATCACGCGAAATTGGTAAGAACATGGTCCGTATAAGAAACAAG
ACCCTTCAAGACCCTCTTGTTTCTTTCTATTGTTGCGAACTTGGACTTAC
GTTGAGGAGTATTTGATAATGTGATCAAAATCTGAGCAAATTGATTTTTA
TATCGTTATTAACAAAGAAAAAAGTAAACAAAGATTACAAAAGGCTTCCG
GACCAGGATTTTTTATACGAGTATGGAAAGAATAANAAAAAGTAAACAAA
AAGTTACAAAAGGCTTCCGGACCAGGATTTTTTATACGAAGTATGGTAAG
TGTAAGTATTTTTTCTTATGACACGGGCAAGACACGCTACAAAAGCACAA
TGAACTTTATACAGTTTTTGTTTTATACCTAGAACCTAGTAATATACTCT
TTTGGTGCTTAATTGTAGGGGGGTCATTTCGCAATTTTTGGAGAAAAAAG
TTACCGCAATATCACATTATAATAATCCCCCTTTTTATGACCTATATGCT
ACGAAGTGCATACACTGCAACTGGACAGGCTGAATCAACTTCGACACCCT
GGTAAACATGGCAACGGCAACAAGGGTTCCATCTTGATTTTATCGTGTAA
AAAGTCGCAATTCATTTAAAAAACCTTAACAGCCTTTTTGGCCATTTCTT
ATTAAACTTTCCGCTACAAAATCCAGCCATCCGGAGCTTTATAAAGCTCT
TTCACGATAATAGGGCAGTAGTTGGAACTTTTCCTAACCGGAAATAACCT
TAATATCAGTTTATCTTTCTCTAAACCCCCCCTCAATTTTAAGACTATGT
AATTGAAAATCGCTCCGCCACTAACCACTTTTTTTCATCTTAAAGTTAGC
TATGTCAATTTACCAGGAGAACTTGCAACTGCAGCTGGAGCTGCAGAATT
GGCAGGATCAGAGCTATATATAACTTTACTTCTATCAGTTAATTCTATTT
CATCCAAATTTGAAAAAAATCCTAAATCTTACAGTTTACTTTATTATGTC
TATTTACCAGGAGATCATGCAGCTGCAGCAGGAGCTGCAGAATTGGCAGG
ATCAGTGCTATATAAAACTTCACCTCTATCAGGTAATTCTATTTCATTCA
AATTTGAAAAAAAATTCCAGATCTTACAGTTTACTTAATTATGTCTATTT
ACCAGGAGATCATGCAGCTGCAGCAGGAGCTGCAGAATTGGCAGGATCAG
TGCTATATAAAACTTCACCTCTATCAGGTAATTCTATTTCATCCAAATTT
GAAAAAAAATTCCAAATCATACAGTTTACTTAATTATGTGTATTTACCAG
GAGATCATGCAGTTGCAGCAGGAGCTGCAGAATTGGCAGGATCAGTGCTA
TATAAAACTTCACCTCTATCAGGTAATTCTATTTCATCCAAATTTGAAAA
AAAATTCCAAATCTTACAGTTCACTTAATTATGTCTATTTACCAGGAGAT
CATGCAGCTGCAGCAGGAGCTGCAGAATTGGCAGGATCAGTGCTATATAA
AACTTCACCTCTATCAGGTAATTCTATTTTATTTAAAGTTGAAAAAAAGA
ATCCAAAATCTTACAGTTTACTTAATTATGTCTATTTACCAGGGAGAACT
TGCAACTGCATAAAGAGCTGCAGCATTGGCAGGATCAATGCCACATAAAT
CTACATTTATATCAGGTAATAATCCCATTTTATTTAAATTTGAAAAAAAG
AATCCAATATCTTACAGTTTACTTAATTATGTCTATTTACCAGGAGAACT
TGCAACTGCATAAAGAGCTGCAGCATTGGCAGGATCAATGCCACATAAAT
CTACATTTATACCAGGTAATAAACCCATTTTATTTAAATTTGAAAAAAAG
AATCCAATATCTTACATGCTTTTTTTGTCTCCAAGAACTACACACAGTCT
AAGTTCGAAAAAATATAATTTCCACTCTTAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064663-exon-scaffold_420-1575043694:40942..43306 | TCONS_00064663-exon-scaffold_420-1575043694:40942..43306 | Clytia hemisphaerica | exon |
| TCONS_00064663-exon-scaffold_420-1575043694:40674..40863 | TCONS_00064663-exon-scaffold_420-1575043694:40674..40863 | Clytia hemisphaerica | exon |
| TCONS_00064663-exon-scaffold_420-1510915933:40942..43306 | TCONS_00064663-exon-scaffold_420-1510915933:40942..43306 | Clytia hemisphaerica | exon |
| TCONS_00064663-exon-scaffold_420-1510915933:40674..40863 | TCONS_00064663-exon-scaffold_420-1510915933:40674..40863 | Clytia hemisphaerica | exon |
| TCONS_00064663-exon-scaffold_420-1491911889:40942..43306 | TCONS_00064663-exon-scaffold_420-1491911889:40942..43306 | Clytia hemisphaerica | exon |
| TCONS_00064663-exon-scaffold_420-1491911889:40674..40863 | TCONS_00064663-exon-scaffold_420-1491911889:40674..40863 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:40674..43306 - |
Blast
The following BLAST results are available for this feature:
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