TCONS_00064661 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064661
Unique NameTCONS_00064661
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1820

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064661 ID=TCONS_00064661|Name=TCONS_00064661|organism=Clytia hemisphaerica|type=transcript|length=1820bp
TATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACCATGACAAAT
AACGATATAATCGTTGTTGAAGAAGAACCAGAACAACAGCATTCGGTAAC
AGATGttgtagaagaagaagaagcagaaGAAGAAGAACATCAGCCTTTGG
CAACAGAAGTGACAAATGATGATGGTGGTAATGCTAACATAGCAAATAAT
GCAGATATAATcgtaatcaaagatgaagacgaagaagaagaatTACAGCA
GCCTTCGGCAACATATGATGATCACGAATACGATACATATTCAACTTTTG
CAACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAACAAGAGAAT
GAAATTCAAGGTTACGGTCAGGTGGAAAGTCGGTATGACCCATGGAATAA
CCACCACGCAAGACGATTCTTGGTGGTTAAACTttctgaaaaacgaaaaa
tgtaCGTGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATATCATAAT
CCTGCTGGCATTGACtttgacgTTTCTTTGGATTCTTTCTTTGGACCGAA
CAACGCAATTAATAAGAGGGTATCCCTTTACACCGGGGACATACGGTGTC
TTGAAATCGACGCGATAGTCAATGCAGCGAATGAAAGTCTTTTGGGAGGT
GGAGGAGTTGATGACGCCATACATAAAGCTGCTGGGGAAAGTCTGAAAAA
GGAGTGCGAGTTGTTGGGTGGTTGTAGACCAGGATACGCAAAGATTTCGG
GCGGTAGGTCACCGTTTACCTGCTAAATATGTAATTCACACAGTTGGCCC
TAGAAACAAGGACGGCGAAATTTTGAAATCGTGTTATACTAATGTCTTTT
CTCTTGttagagaaaaaaatataaaaactattGCCTTTCCGTGTATTGTG
ACAGGCGACTTTGGATTTTCTATCGAAGAAGCATGTAACATTGCTTTAAA
AACAACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTGGAGAGGATAA
TTTTTTGCGTTTTCGATGAagacacaaaaaaaatttacgcAAAATTAATG
AAACTTTATTTTCCGGCCCCAACGAATCTTACTTTGGATGGATACTTGCC
TGGTCAGTATATTTTGTATTGTTTGTGTTTTTGTTTGATGTATCTAAAGA
TACAGAATATACCAGCTTTTCAAAAACGGGTGAAGGCTTGACACTCAAAT
GATTTGCTCTTAAGGGGTGCGGCAAGTATGAATGAGGATCTGAAAACTTT
GTTCAGTCAAACATTCAAAACCACATTGTCTTTTGCTTGAAAGCGAAAGC
GATTGGGTTTTATTGTAATGTTCTGATGCAATTATTTTACTCAAAATCAC
AAAACCACATTTTGATATTGATCCAAACTTTGGATGAAACCACTAACCTG
GGACTATCCTATTTACTAATAAGCCATTGTATCGTGAGTAAATTATCAAA
CAGGCGTGATATCACCTCGATAAAAACTGTGAGAGTCACAGTATACGAAC
AACAAATATTCTATTCAGCACAcattaaatgaatataaaagtAACCATGG
CAATCGTCCAGGATCTTGATAAACTTAGGAAACCCAGTGGTCTCTGAACA
CAACACGAAGATCATTCTATAATAAGGAATCATTTAAATTAATGttaaag
aattgaaaatttattaatGAATGGGTAACTAATTTTAGGGAACTAATTTT
ACCGATATTTGTTTAAGCTGAACATGAAAACAAGTACTCTCCATCTTCGA
ATAGTCCGTCGCCACAGGTTAACTTTTAAAACTGTGGTGCTCACGGTAGT
ATCATGGCCTTCAGAGGAGA
Run BLAST on NCBI

transcript from alignment at scaffold_420:12153..24506-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064661 ID=TCONS_00064661|Name=TCONS_00064661|organism=Clytia hemisphaerica|type=transcript|length=12354bp|location=Sequence derived from alignment at scaffold_420:12153..24506- (Clytia hemisphaerica)
TATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACCATGACAAAT
AACGGTATGGTTTATACTACTAAACAAAAGGAAAAGTCAAAATGATCTCT
TTAAAAAGGAGCTCTTAATTTCAAAACTTCTTCAAAGGGTACGACCGCAC
GAACAAAGAACCCTGAGATTGATCATATTAATTTTGGCATAAAAATTCCG
TGCTCTTCTTCTTGATATACCTAAGCAAAAATTACGTTTTTCCTCCTATC
GAAGCATCCGAAATTCTCATTAAAATAGAAAAAAATATAATGGTCCAAAT
TCAGGGTTTTTAAGAATTTTAACAAGGATTTATCTCCCGTTTTCCCATTT
GTTTGTTCAGCAGATATAATCGTTGTTGAAGAAGAACCAGAACAACAGCA
TTCGGTAACAGGTAAAATCAGAAAGTCCTTCATATAGAAACCTCTTCGCT
TTATTACACGAACACATATCTCAAGGGTTTTTACCTAAACAAATCAATAG
AATGAAAATTTTGATTTCATTACATTAGCATTCCGTAAGGACAGTTTTGT
GGAAAATATTCGAAATCTTCTTTAGATCCCTAGAAAAAGTATTTAAGGGG
ATGATTCTTTTTAAGGATTTTAGAATAAGAATTTGATCTTCTGCTTTTTT
TCTCGTTCATTTGTTCAGCAGATGTTGTAGAAGAAGAAGAAGCAGAAGAA
GAAGAACATCAGCCTTTGGCAACAGGTACATAAAAAACTCTTTTTTTTGA
AAAATTTCATTGAAAAGTTCGGCACCATTAAGATGCGTCTTTGGTCCAAA
TTTGACAAAGATTTGACATGTACTTATAGAGTTAGAGCTAATTTACGATT
TATGACGTCATAATTTGACGACGTCACAATTGACACTTTCTTTAAATGAT
TAATTTTTAGGTTAATATTTAATTACGTAACACCGGGTCCTGAAACTTTA
AGGTATAGGTCATCTTTTTGAAGCCGGAACTCTTTGAAAATCGCCGTAAC
AACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCGAGCTGTAC
TTAATATTTTTTATGAAATATTGCATACTGATGCAAAATGACAATACCTA
AAATGTCACGGAGCCCGATCTAAAAAAAAAAAAAATTTTCCGGCCGAAAA
TGCCGGAAATATGCTGGAAAACTGGTTTTTTGACATTTTCTCGAATTTTC
ATCCTGTCTGATTTTTTTTCAGAAAGATGCGTATTCGCAATGCTCAAAAC
ATGACAGAATTCGATTTTTGAGAAAAAAATTTTTCCGGCCAAAAATGCCG
GAAATTTCCGTTTTTGCAGATTTTCATTGGATTTTTTCGTTTTATGTCCT
TTTTTTCAAACATTATTTATAAGAATGTCCACGATTAAGCATGTTTCAAT
TTTCAATGAAACTGATTTTGGTAAAGGAACTTTCTAAAAATCGCCAGAAC
AGCCGAGAAGCCGGATTTCTTGAATTTCTCTATTGTTGTCATTTTTCAAT
TGTCTTATTACATCAATCTTCAGGTAGGTCCATTCAGCATGTAGCTTGTT
ACATTAGTATTCTAAGATACTTTTGAAGATTGCTTTTAAATTGTTTATCA
CGCATAAAATGGCAATGAAACTCATCCAATATAACGCTAATTGAAGTTTT
TCTTAAAGAAAGATTATTTTTGTTGAATCATTTTAGAAGTGACAAATGAT
GATGGTGGTAATGCTAACATAGCAAATAATGGTAAAATTTTCATGTTTGT
ACTTTTTATTCTTCCTTAGAATAAGACAATTTTCTCCTCAGATTTATATT
CAATTTAGGGAAATCTTGATCCTGGTGGGAATAATCCAAAAAACGCGAAA
GTTTCTGCCCGCGGTTTTTAAGAATTTTAACAAGGATTTATCTCCCGTTT
TCTATTCTCATTCATTTGTTCAGCAGATATAATCGTAATCAAAGATGAAG
ACGAAGAAGAAGAATTACAGCAGCCTTCGGCAACATGTAAAATCCTTGAG
TTCTTTATATGAAAACCTCTTCGCTTTATTATTATACAAGCGCTTATCTT
TCTTATTAGTATTAGCATACTTATCTAAACGAATCAAGATTGAAAATTCT
AACCTTTCTTCTGGATAATTATAAACAGAAGAATATTTTTCTGACATTGT
TGATGATACGCGTACGAACATCTTCCAATGTCTATAGCAATATCTTTCTT
CTTTCTCTTGTAGATGATGATCACGAATACGATACATATTCAACTTTTGC
AACAGGTACAGATCAATATTCAAAAAATGATTTTGATTTGAAGGTGCCAT
ACTTGGCTTAATGATTAGCTCGTAGATCTATTGCTTGCTTCTATCTCCCA
GCTTTATGTCATGTCAGTAACGTGACTTAAGTCAAGTATCTAAAGAGTTT
TATAGACAATGAGTAAAATGTTTCAAACAATTAAAAACTAATGACAGACT
AAATTTTGTGGAATTCATTATGTATCTGACATGGGAAAGTGTCTATTTAG
AACGCTTATGACGAGGTATCCAGCGCAGCTAACAAAAGACAAATAGAATT
TCTAATATACAATTCCCGTCGTCGCAAATGTCGGTTTGGATTATGCATCG
GTAGTCGATATCCGAAATTCTATCTTTACTTAACTGAAATTCGAATTAGC
TTCTTCGTGAAGTTTGACGGTGATTTCAATTTAATTGAAAACGCGAACTT
ATTAAGCAGTAAAACGCCAATAAGTTAGAGAACGTAAACTGTATTATCAG
TGTAAATTTTAATGGAAGAGAACAGTAAAAAATAATGCTCATTTAAGTGT
TAATTTTCTCGCTCAAGCATGAATGAAAAATAAAATCTTAAACTTACAAA
TAAAACCAGGACGTACATACACAGCTTTCTCGAAAGAAAATATTTGTCCA
CATCTCCATTAAACACTTGGTGATCGATGTCAATCCTCCAGCGACTTTCA
ATGAAGTTTGCATGATTGAAGTACAACTATCAGGAAAAGATTTACTCGCT
GTTACATGCATTTATCGAAGCCCAACCAGATCTACGTCCTCTAACGAAAA
TAACAACAACCTAAACTTATTAAACAAGTCCATTGCATTAAACAAGAAAT
ATTCGCACAAATGTTTGTTAGGTGATTTCAACTTTCCAACAATCAATTGG
GAAAACTGGACCACCCTACATCTGGAGGATAGCAAAGAAGAGAGATTCTT
AAATGCTTTGAGAGACGCATATCTACATCAACATGTTAATGAACCAACTC
GATGTAGAGGAACTGATGACCCATCCCTCATCGACTTGATCTTAACAGGC
GAAGAAAACCAAATTAGGAATCTCGACTACCTAAGACCACTAGGAAAAAG
TGACCATAGTTCGTTGGCTTTCAATTTCGTTTGCTACGTTTACTCCAAAC
CTACGCAAACAAGGTTTGCAACATCTATGGCCAATTTCAAATTAATGAAG
AATTACCCGACGTTGAGGGAATGGAAAGAAGGTTTAAAAAATGCATCCGT
GAATAAATCAGTGGAAGATCTTTGGGAATCGTTCAAGAAAGTTGTCATTG
ATCTCTTTGAAAGAAGTTGGAAATGATTTTTGGAGGAAAAAAGGTAAAGT
TCCAATTAAGAAGAATCTTCAAGATGAAATCAAGTTAAATAAAACGCTCT
ATAGAAGGTGGTTAAGATCTGCACCTCTCGACAGAGATCGTCATCGTGTC
AATTACACTATTGTAAGAAACAGAGTTAATCGTTTGATGTCAAAGGCCCA
CAGGAAAAAAGCATTTGTGATAAATCCAAGGAAAAGCCAAAGATATTTTG
GTCTCAGGTAAGATCTAAACTTAAGTCATAAGCGCAGTCTCACCACTACT
TGAAAACCCTGATGACAAATCATCGATTAAACACGACGATCTCGACAAGG
CTAACATCCTACAAAAACAGTTTTGCAGCGTCTTTACCAATGAGCCTCCA
GGAACGATCCCCGACCTTCCTACACGAACTNAGCATCTTTACCAATGAGC
CTCCAGGAACGATTCCCGACCTTCCTACACGAACTGAGAATCAAGTTGAG
AACATCATCATAACAGAAGATATGATGAGAAAACAGATAAAATTGCTGGA
CGTGAGTAAATCCTTCGGTCCGGATGATATACGTGCCATTTATCGCCCAA
AACCTTGCGATAAATTATAGACCTGTTAGATTGACTTCAGTAGTCTGTAA
TGTACAAGAAAGTACATTATGAAGCATCTAACTGACGAAAAGCTTCGAAC
CAACCATCAATACGGTTTCATTAGTCGCCGCTACAACGTCACACAACTCC
TAAATTATTTGGACAAGTGCTGTGAAAGTATAGCTAACGGAACTGTTGTG
GACACTGTATATTTCGGTTTTGCGAAAGCCTTTGATACTGTTCCCTATCG
CCGTCTACTTAAAAAGCTTAAAGGATATGGAGTATCTGGAAACATCTTGA
GATGGGTAGAGTCTTTTCTGACTGACAGAAAACAATTGGTTAAGGTTAAC
CAAACTCGATCTAAGACGGATGATGTTATCAGTGGTATTCCCCAACAAAG
TGTTTTGGGACCACTTCTCTTTGTTATCTACATGAACGACCTCCCTGACA
ATGTGCTGTCTTCGATTCTCCTACTTTAAGGCCAGAAACTTTCGCAGGCA
GAAACTTTCGCGTTTTTCGCGTTTTTGGCCTTCTTTCGCGAAAGTTTCTG
CCAGGTAAGAAATTAAAGTTAATTTCGCGAAAAATGAAATTTTTCTAAAA
ATCGCGAAAGTTTTTTCCAAGTTTTAAAAGCCAAGGATTATCGACTAGGA
TTCGGAATGGGAGGNATCGCGAAAGTTTTTTCCAAGTTTTAAAAGCCAAG
GAGAGTCGATATTATCGACTAGGATTCGGAATGGGAGAAAGAAGTGCAAA
TAATATATTTTTCATTTATTAGCATATCATTCTTTCGATTGAAGAAAGAA
ATGAGATTTGAAATAGTTTTTTATTCACTTTCCCTAGCTATTCGCGAAAG
TTATTGCAACTAAAATTAAACATTCACAAAAAACCGCGAAAGTTTCTTCC
GTAAATTTTCTTCAAAAAGTAAAAATCGCGAAACTTAAATCCGCGAAATT
TCGCGACTTTTCGGTCTCGCGAAACTTTCTGCCCGCGAAAGTTTCTGCCC
TTTGCTGACGACACGAAGATTTTCAAAGAAGTCAACTCGATTGAGGACTC
ATTGGCTATCCAAAAAGACATACACAAACTTGAAAAGTGGTCAAATTATT
GGCTATTAAGATTTCACCCAGATAAGTGCCACGTTCTCACTCTCGGTAAA
TATTGGAATATTGTCCACGCGCACCCTTATTCACTTAGAAGTGAACAACT
TGAGCATGTTTTTGTTGAAAAAGATCTCGGTGTTCTGATAGACTCTGACT
TATCCTTTGAAGAACATATATCAAAACAAGTGAAAAAATCAAATTCCATT
CTAGGAGTCATCAGAAGAGGTTTCGAAGACCTAAAAACTTAAAACTTTCT
TCGCTCTGTACACAACCGGCCTCATCTCGAGTATGCCCAATCTGTATGGT
CACCAAAACTACGTAAGGACATCAACTTAATTGAGGGCGTTCAACGACGT
GCCACTAGGATGGTCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAGTCAGTCACGAA
AAACGTCGAATAAAGTTCTGAATACCACGCGCATAAGCATATATTTTTCA
AAATGTCCAGAGTACAAGGTTTTCTTTACATATCTCAGCCAATTAGAGCT
TTACCCGACGTTTTTTATATAAATCTGCTATTAGGAAATTTGTTTATTAA
CCGCTCTTATTAATTGAGAACGAAAACATTTGATTAGGAACTGATATTTT
TTTTTACATCCTACATCTTATGTTTCAATAGATGAATAACGCATTTCTTA
TCCTCCTTTCCTTAATCTCTGTTTTAACAACTGACTTTTTGCTTTTTTAT
ATACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAACAAGAGAAT
GAAATTCAAGGTATTGCCTTTTTCTAAAGGAGTTATTTATTTGAATTCTT
ATAACTTTCTTATAACACTTTAAAGGGCCTCTTTATAGGCTGTGCGCTTA
CATTTCGGAAGAAGATGGTGGAGTCTTGCAAAAATCTAAAAAAAAGTTTT
CTACTATTTAATTCTTTAATGTTATTNGCGTAGAGAGCGGGGGGGGGGGG
GGGGCTGTGCGCTTACATTTCGGAAGAAGATGGTGGAGTCTTGCAAAAAT
CTAAAAAAAAGTTTTCTACTATTTAATTCTTTAATGTTACTTTAATCGAT
TCCTGGTTATTGAAAAATCTATATTCTATGTTTTGAGATGTCTCTCTTTC
ATTGAACCTTTTCTACGTTTTTCTTTTTTCGTTGAATCATTTCTACGTTT
TATTGTCCCTGATTTGATGGGTAAAGCCTTTCATCCAAGATCCTGGATGA
TTGCAATAGATTACTCAGTGCGCGTTGAATAGAATCGGGATTTGCCCTCA
CTCACATCGTAATGTTTGTACGCTGTGATACTCGCGGTATAAGTGTGTAT
ATTCTTATTATGTGCTACACAACCGATTCTCCTTTACAAGACAAAAAAGT
GCATCTTGAAATCCGAATCATTTTAACACTGTAATATCCTAATATGGTGC
TTCATGTTCTTCGACATTTTCAGGTTACGGTCAGGTGGAAAGTCGGTGTA
AGTGTACCTTTATATTGTTCACTACCATCCTACCATGATTACAATGAAAG
GAATTTCGTTTATCTCTTTCATCTGAAATCCCAAAACAATGCCGATTCTA
AGGACCGACTTAAGACTTCAAAATTTACACTAAATAAAATTCTCAATTAT
CATCATTCATTTTGGGAAANCCGATTCTAAGGGCCGACTTAAGACACTAA
ATAAAATTCTCAACTATCATCATTCATTTTGGGAAAAATCTTCTTGTTTG
ATTATTTGACTTCTGCTTAATTTTTAAGATGACCCATGGAATAACCACCA
CGCAAGACGATTCTTGGTGGTTAAACTTTCTGAAAAACGAAAAATGTACG
TGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATATCATAATCCTGCT
GGCATTGACTTTGGTAAATTTTTATTTTATAGTGAATCTTTAGATCAGAA
AACCTTGTTTAAATTACCACACAGACTATCAAATGACTGTTATGTTTTAT
TTTTCAGACGTTTCTTTGGATTCTTTCTTTGGACCGAACAACGCAATTAA
TAAGAGGGTATCCCTTTACACCGGGGACATACGGTGTCTTGAAATCGACG
CGATAGTCAATGCAGGTACTTGAATTCAACTACTTAGTGCACGCCATTCT
TGACGAATGAATGCCAATAGGAAAAAGATTACGAAACACTGAATGGACAT
TTCTTAACTGACCTACTGTTTATTTTCAGTGGCTAAGAGTTGTAAGGATA
TATTCCCAGGGATACTAGGTTATAGGGTGGCGCGTACTCTGAGTATCACA
AATCGAGCTTAAATAATTAAAAGACAAGCTTTGATCGAAAACGCAATCAG
GATCGCGCTGACTGTCATATAACAACAATAAACAATTCATGACGTAGTTT
TGATAAAATACATCGAAGCAGATTATTTGAGATGAAGAGCTGCATTTTCA
TATCAATAATTTGTGTGGATTATAAAATATAATTTTTGGAATAAGATAAA
TCTTTGCAAGGTTCTTTTGTAAAAGGCAAACGCATATTTGCCTCTACGCA
GACTTGAGTGATCCTTGGAGCTTAAATTGTCTCTACTTCAAAGAAATTTT
ATTCCGAACTCTTAAGAGACAAAAACATAATTGTTACAGTTTCATTTGAA
AAAAATAAGTTAACGACAATATTGTTGCGAATGAGATTAAGGCGATGGGG
TTTATCTAGACCTTTATTCGTTCTCGCGCGTCACATTTCCAAAATTCGGC
AGTAAATATTGCTTTCTATCTGGCGTTTGCGTAAAAACACGCGGGTCACG
TCTTATGGATGTTGAAGGACTCGGTATTTTTAGCCTTTTGGAAAGTAGAT
GATAATTTTGATAACCCTTAGAAACCCTTGATTTTCGCACATATCTAGTA
CCAAATTTGCCTTACGGTGTCGGTGTTATTGATAATCCTAGACTGGAGTC
GTTTATAATGCGTGTAATACTAATAATACCAATACTAATAACAATAATAC
GGTATTTAGTTTGTATAAACGACTGGAAGGATCCGGTGTTCCAGCCTTAT
AGATACAGGGGCTAGCTACGCAGAAACTTGCGTAGCGAGAAAACAATTTA
TCAAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNAGTTAGTGCACAAAGGTTTCTAGACGACTAA
AATTGTTCCATTCATTACTTTTTGCTTTATTTCTACTATGTATAAATTAG
TCGTCTAGCTTGCTAGACTATGATAATCCATACTCTATACTCTTTTTTTC
CAGCGAATGAAAGTCTTTTGGGAGGTGGAGGAGGTAAGATGTTTGCCGTT
TTAAAGGTTTATATTCTTTGATCTTCCTTTTTTAAGGAACTAATCTGAAC
ATAGGTTTATATTTTCTTTTAATTCTCAACTTCAGTTGAGCTAGAATCTG
ACAATGTCTGTATGTATGTCTGTATGTCCGTCCGAAAATTTGGGCAGCCT
GGAGACTAAAAAATATTGTTCGATTTGGCTGAAATTTTGCACACTTGCTC
CTTGGGTGAATATCTGGGGGTGTTTTTTCACTTTTTAAACATTTATATCT
GGGGCCTGGGGACTAGTTTTTTGCCAAAACGAGGCTAAAACTTGGGGCAT
CCTGGAAACTTCAAAAATTGTTCGATTTGGCTGAAATTGTTCCTTAGGTG
AATTCTTTTTCGGGTGAGTTTTCTCAGAAGTAAGTTATTTTGAAAGGCTC
TGAGGACGAGGACAATATTCTAAAGACACTATTTTAACGTATATAAAAAA
TGTAAAATGAAGATAAAAACAACCCTAGGTATTCACTCAAGGAACAGGTG
TACCAAATTTCAGCCAAAACGGACAAAATTATAATATTTGCTACCTAATA
CTAAATATTTGAAATGTTACAATTGGGCTTTCGAATAACAAAATATCTGA
AGTTGAGCCTCGACTATTTCTATTAACCTAAAAGACTTACCAAGCAAAAT
GTTTTTTTAAAATGTTTTTTTCTTTTAAGTCATTGATGTATTACTTTTAT
TTGTGATAATTTTGATCTATAATCTTTTGTCTCTTTAGTTGATGACGCCA
TACATAAAGCTGCTGGGGAAAGTCTGAAAAAGGAGTGCGAGTTGTTGGGT
GGTTGTAGACCAGGATACGCAAAGATTTCGGGCGGTATCGATTTTTATTT
TAGTTTTTGAATCATTGTTCTAAAAAAGAAGTATTTTTTAAATCCTGAAA
ATGATCCTTTGATAGATTTATTTATTTACTCACAAACACAACTGTGATCT
TCAGATGTAATAGTATATTAGTGAAGACATTAGCCTGATATTTTATTACC
ACTTTTCTTCTTTTCATAGGTAGGTCACCGTTTACCTGCTAAATGTAAGA
TAATTTTTCATTTGAATTTAGCCATTTTATAAAGATTTTGACAAAGCAAA
CATAAAACGCCTATTTTTATCGACTAGACGACAATTCTTACACAGTAATG
GTATTTTCTTGGACAAATCGAAATATCATAAAAAGGCAAGAGAGGTTGTC
ATAATTTTCGAATTTAATTTGGTAATTTGGTCTGCAGCCAACTTTTTAAG
TTGCTAAATTTAAGTAAATTCGACGTGATTTATGAAAAGCTTCTTCGATG
TTGAATATAAGGCAATATCAGTATTAAATTGATTTATAACAATTGCGTTC
GGTTTGACATCGTTGTTCAATTGCATCGTTGTCAATTTTGTGTTCGCGTA
TGCTTCCATTAATATGAAAATTACCAATTACCATTGCTCTTTTAGATGTA
ATTCACACAGTTGGCCCTAGAAACAAGGACGGCGAAATTTTGAAATCGTG
TTATACTAATGTCTTTTCTCTTGTTAGAGAAAAAAATATAAAAACTATTG
TAAGTCTATAATTTTCCCTTTTCGAGAATGATTTGCCTTTGTACAGCTTT
TCCGGCCTTTTCCTCGGATAGGATCTGGAATACTAGGTGCACCAAGCTCT
AAATTTACTTTGTATGATGGTCGAGGCAATTTTGCTTTTCCAAGCTTTTG
AGCTAGGCTAGAAATAGTCTTTGTCTTTTGATCTTCAATTATTTCAAAAT
CCGTAAGTAGAAACAGTTGATCAATTTCATGTTTCAGGCCTTTCCGTGTA
TTGTGACAGGCGACTTTGGTAAGAAATCTAATTTGTTTCTTTGTACCTTA
CTTTAAGTGACCTTTTTTTGCTCTAAAAACTTTCAAAAAAGATTGGGCTA
TTCCAGAAATAGTTTGTACACTCTATGTTGAAGAGGTGGTCCAGGATGGC
CAGGAAAATGAAAATGGTTCAGGGCAGTCTTGCTTTTCGAGTGTAAAAAT
CCAGAGTGCTCAGTAGATTGAGGTGGAAATTCTGGAGTGGTCAAAAAATG
AACTCGAAAATCTAGAGTATGGTCAATACAATGAGCTCAAAAATCCAGGA
TGGTCCAAAAAATGAGAAATAAAAAACCAAGGGGGTTCACGTTTCCAAGA
CCATCTCAACATTGGGAGTACAAAATCTTTCTGGAATAGCCCAATCTTTA
CATACTTATGTACTTTTTCTTTCGAAAATTAAAACAAATGTCTTATTTTT
ATGTTTCTAGGATTTTCTATCGAAGAAGCATGTAACATTGCTTTAAAAAC
AACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTAAGCTATCAAAACT
GAAAAATGTTTCTTGTTTTTCTGAAGAAAAATGAGATATATTTTACTGAG
AATCGAATGATGAAGAAGTTTTGGCAATATAATTTAATGTTTGTTTTATT
TGACGAGAATTGCCACGAAAAGCATCTTCTCCTCTTGATTGAAATGTGCT
ATTTTAATTTACTTTTTTCAGGTGGAGAGGATAATTTTTTGCGTTTTCGA
TGAAGACACAAAAAAAATTTACGCAAAATTAATGAAACTTTATTTTCCGG
CCCCAACGAATCTTACTTTGGATGGATACTTGCCTGGTCAGTATATTTTG
TATTGTTTGTGTTTTTGTTTGATGTATCTAAAGATACAGAATATACCAGC
TTTTCAAAAACGGGTGAAGGCTTGACACTCAAATGATTTGCTCTTAAGGG
GTGCGGCAAGTATGAATGAGGATCTGAAAACTTTGTTCAGTCAAACATTC
AAAACCACATTGTCTTTTGCTTGAAAGCGAAAGCGATTGGGTTTTATTGT
AATGTTCTGATGCAATTATTTTACTCAAAATCACAAAACCACATTTTGAT
ATTGATCCAAACTTTGGATGAAACCACTAACCTGGGACTATCCTATTTAC
TAATAAGCCATTGTATCGTGAGTAAATTATCAAACAGGCGTGATATCACC
TCGATAAAAACTGTGAGAGTCACAGTATACGAACAACAAATATTCTATTC
AGCACACATTAAATGAATATAAAAGTAACCATGGCAATCGTCCAGGATCT
TGATAAACTTAGGAAACCCAGTGGTCTCTGAACACAACACGAAGATCATT
CTATAATAAGGAATCATTTAAATTAATGTTAAAGAATTGAAAATTTATTA
ATGAATGGGTAACTAATTTTAGGGAACTAATTTTACCGATATTTGTTTAA
GCTGAACATGAAAACAAGTACTCTCCATCTTCGAATAGTCCGTCGCCACA
GGTTAACTTTTAAAACTGTGGTGCTCACGGTAGTATCATGGCCTTCAGAG
GAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040556XLOC_040556Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064661-exon-scaffold_420-1575043694:24453..24506TCONS_00064661-exon-scaffold_420-1575043694:24453..24506Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:24096..24143TCONS_00064661-exon-scaffold_420-1575043694:24096..24143Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:23782..23835TCONS_00064661-exon-scaffold_420-1575043694:23782..23835Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:22776..22820TCONS_00064661-exon-scaffold_420-1575043694:22776..22820Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:22521..22583TCONS_00064661-exon-scaffold_420-1575043694:22521..22583Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:22252..22293TCONS_00064661-exon-scaffold_420-1575043694:22252..22293Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:18247..18300TCONS_00064661-exon-scaffold_420-1575043694:18247..18300Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:17560..17583TCONS_00064661-exon-scaffold_420-1575043694:17560..17583Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:17144..17278TCONS_00064661-exon-scaffold_420-1575043694:17144..17278Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:16942..17049TCONS_00064661-exon-scaffold_420-1575043694:16942..17049Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:15524..15553TCONS_00064661-exon-scaffold_420-1575043694:15524..15553Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:14673..14768TCONS_00064661-exon-scaffold_420-1575043694:14673..14768Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:14463..14487TCONS_00064661-exon-scaffold_420-1575043694:14463..14487Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:13958..14061TCONS_00064661-exon-scaffold_420-1575043694:13958..14061Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:13689..13719TCONS_00064661-exon-scaffold_420-1575043694:13689..13719Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:13173..13246TCONS_00064661-exon-scaffold_420-1575043694:13173..13246Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1575043694:12153..12985TCONS_00064661-exon-scaffold_420-1575043694:12153..12985Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:24453..24506TCONS_00064661-exon-scaffold_420-1510915933:24453..24506Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:24096..24143TCONS_00064661-exon-scaffold_420-1510915933:24096..24143Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:23782..23835TCONS_00064661-exon-scaffold_420-1510915933:23782..23835Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:22776..22820TCONS_00064661-exon-scaffold_420-1510915933:22776..22820Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:22521..22583TCONS_00064661-exon-scaffold_420-1510915933:22521..22583Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:22252..22293TCONS_00064661-exon-scaffold_420-1510915933:22252..22293Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:18247..18300TCONS_00064661-exon-scaffold_420-1510915933:18247..18300Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:17560..17583TCONS_00064661-exon-scaffold_420-1510915933:17560..17583Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:17144..17278TCONS_00064661-exon-scaffold_420-1510915933:17144..17278Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:16942..17049TCONS_00064661-exon-scaffold_420-1510915933:16942..17049Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:15524..15553TCONS_00064661-exon-scaffold_420-1510915933:15524..15553Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:14673..14768TCONS_00064661-exon-scaffold_420-1510915933:14673..14768Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:14463..14487TCONS_00064661-exon-scaffold_420-1510915933:14463..14487Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:13958..14061TCONS_00064661-exon-scaffold_420-1510915933:13958..14061Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:13689..13719TCONS_00064661-exon-scaffold_420-1510915933:13689..13719Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:13173..13246TCONS_00064661-exon-scaffold_420-1510915933:13173..13246Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1510915933:12153..12985TCONS_00064661-exon-scaffold_420-1510915933:12153..12985Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:24453..24506TCONS_00064661-exon-scaffold_420-1491911889:24453..24506Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:24096..24143TCONS_00064661-exon-scaffold_420-1491911889:24096..24143Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:23782..23835TCONS_00064661-exon-scaffold_420-1491911889:23782..23835Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:22776..22820TCONS_00064661-exon-scaffold_420-1491911889:22776..22820Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:22521..22583TCONS_00064661-exon-scaffold_420-1491911889:22521..22583Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:22252..22293TCONS_00064661-exon-scaffold_420-1491911889:22252..22293Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:18247..18300TCONS_00064661-exon-scaffold_420-1491911889:18247..18300Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:17560..17583TCONS_00064661-exon-scaffold_420-1491911889:17560..17583Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:17144..17278TCONS_00064661-exon-scaffold_420-1491911889:17144..17278Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:16942..17049TCONS_00064661-exon-scaffold_420-1491911889:16942..17049Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:15524..15553TCONS_00064661-exon-scaffold_420-1491911889:15524..15553Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:14673..14768TCONS_00064661-exon-scaffold_420-1491911889:14673..14768Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:14463..14487TCONS_00064661-exon-scaffold_420-1491911889:14463..14487Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:13958..14061TCONS_00064661-exon-scaffold_420-1491911889:13958..14061Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:13689..13719TCONS_00064661-exon-scaffold_420-1491911889:13689..13719Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:13173..13246TCONS_00064661-exon-scaffold_420-1491911889:13173..13246Clytia hemisphaericaexon
TCONS_00064661-exon-scaffold_420-1491911889:12153..12985TCONS_00064661-exon-scaffold_420-1491911889:12153..12985Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:12153..24506 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.88605e-08	0.00257509	0.000491529	5.68862e-05	0.124183	0	1.02978	0	3.51984e-10	0	0.0956716	0.543535	0.448085	0	0.557387	0	6.29143e-09	0.295238	0	0	0.855623	0.521925	0.812926	0.489594	0	0	3.88062e-05	0.154338	0.628928	1.05772e-09
Blast
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BLAST of TCONS_00064661 vs. Swiss-Prot (Human)
Match: MACD2 (O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sapiens GN=MACROD2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.607e-46
Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 1 
Query:  757 GHRLPAKYVIHTVGP------RNKDGEILKSCYTNVFSLVREKNIKTIAFPCIVTGDFGFSIEEACNIALKTTRDWLEGHHEEVERIIFCVFDEDTKKIYAKLMKLYF 1062
            G+ LPAKYVIHTVGP           E L +CY +   LV+E NI+++AFPCI TG +GF  E A  IAL T ++WL  +H EV+RIIFCVF E   KIY K M  +F
Sbjct:  133 GYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFF 240

HSP 2 Score: 96.6709 bits (239), Expect = 9.607e-46
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 3 
Query:  414 RFLVVKLSEKRKMYVVNHVKMESIEVYHNP---AGIDFDVSLDSFFGPNNAINKRVSLYTGDIRCLEIDAIVNAANESLLGGGGVDDAIHKAAGESLKKECELLGGCRPGYAKISGG 755
            R L + L E+RK Y+ +++ + SI  +       G + + +         ++ ++VSLY GDI  LE+DAIVNAAN SLLGGGGVD  IH+AAG  L  EC  L GC  G+AKI+ G
Sbjct:   17 RLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAKITCG 133
The following BLAST results are available for this feature:
BLAST of TCONS_00064661 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MACD29.607e-4651.85O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sa... [more]
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