TCONS_00064658 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064658
Unique NameTCONS_00064658
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1226

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064658 ID=TCONS_00064658|Name=TCONS_00064658|organism=Clytia hemisphaerica|type=transcript|length=1226bp
agGAGCGGTATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACCA
TGACAAATAACGCAGATATAATCGTTGTTGAAGAAGAACCAGAACAACAG
CATTCGGTAACAGCAGATGttgtagaagaagaagaagcagaaGAAGAAGA
ACATCAGCCTTTGGCAACAGAAGTGACAAATGATGATGGTGGTAATGCTA
ACATAGCAAATAATGCAGATATAATcgtaatcaaagatgaagacgaagaa
gaagaatTACAGCAGCCTTCGGCAACATATGATGATCACGAATACGATAC
ATATTCAACTTTTGCAACAGCAGCCGCGAATGTACTGGATGAGCCAATCG
TAGAACAAGAGAATGAAATTCAAGGTTACGGTCAGGTGGAAAGTCGGTAT
GACCCATGGAATAACCACCACGCAAGACGATTCTTGGTGGTTAAACTttc
tgaaaaacgaaaaatgtaCGTGGTGAATCATGTTAAAATGGAAAGCATAG
AAGTATATCATAATCCTGCTGGCATTGACtttgacgTTTCTTTGGATTCT
TTCTTTGGACCGAACAACGCAATTAATAAGAGGGTATCCCTTTACACCGG
GGACATACGGTGTCTTGAAATCGACGCGATAGTCAATGCAGCGAATGAAA
GTCTTTTGGGAGGTGGAGGAGTTGATGACGCCATACATAAAGCTGCTGGG
GAAAGTCTGAAAAAGGAGTGCGAGTTGTTGGGTGGTTGTAGACCAGGATA
CGCAAAGATTTCGGGCGGTAGGTCACCGTTTACCTGCTAAATATGTAATT
CACACAGTTGGCCCTAGAAACAAGGACGGCGAAATTTTGAAATCGTGTTA
TACTAATGTCTTTTCTCTTGttagagaaaaaaatataaaaactattGCCT
TTCCGTGTATTGTGACAGGCGACTTTGGATTTTCTATCGAAGAAGCATGT
AACATTGCTTTAAAAACAACTCGGGATTGGCTGGAAGGTCACCACGAGGA
AGTGGAGAGGATAATTTTTTGCGTTTTCGATGAagacacaaaaaaaattt
acgcAAAATTAATGAAACTTTATTTTCCGGCCCCAACGAATCTTACTTTG
GATGGATACTTGCCTGAATGTTGGAATCAACGAAAAAGGACGAGAGTAAT
GAGTGGAGATTGGGactgatatttttttattttatttatttaattcgTTT
ACACAAACATTGTTAGAAATTTTTCC
Run BLAST on NCBI

transcript from alignment at scaffold_420:11861..24514-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064658 ID=TCONS_00064658|Name=TCONS_00064658|organism=Clytia hemisphaerica|type=transcript|length=12654bp|location=Sequence derived from alignment at scaffold_420:11861..24514- (Clytia hemisphaerica)
AGGAGCGGTATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACCA
TGACAAATAACGGTATGGTTTATACTACTAAACAAAAGGAAAAGTCAAAA
TGATCTCTTTAAAAAGGAGCTCTTAATTTCAAAACTTCTTCAAAGGGTAC
GACCGCACGAACAAAGAACCCTGAGATTGATCATATTAATTTTGGCATAA
AAATTCCGTGCTCTTCTTCTTGATATACCTAAGCAAAAATTACGTTTTTC
CTCCTATCGAAGCATCCGAAATTCTCATTAAAATAGAAAAAAATATAATG
GTCCAAATTCAGGGTTTTTAAGAATTTTAACAAGGATTTATCTCCCGTTT
TCCCATTTGTTTGTTCAGCAGATATAATCGTTGTTGAAGAAGAACCAGAA
CAACAGCATTCGGTAACAGGTAAAATCAGAAAGTCCTTCATATAGAAACC
TCTTCGCTTTATTACACGAACACATATCTCAAGGGTTTTTACCTAAACAA
ATCAATAGAATGAAAATTTTGATTTCATTACATTAGCATTCCGTAAGGAC
AGTTTTGTGGAAAATATTCGAAATCTTCTTTAGATCCCTAGAAAAAGTAT
TTAAGGGGATGATTCTTTTTAAGGATTTTAGAATAAGAATTTGATCTTCT
GCTTTTTTTCTCGTTCATTTGTTCAGCAGATGTTGTAGAAGAAGAAGAAG
CAGAAGAAGAAGAACATCAGCCTTTGGCAACAGGTACATAAAAAACTCTT
TTTTTTGAAAAATTTCATTGAAAAGTTCGGCACCATTAAGATGCGTCTTT
GGTCCAAATTTGACAAAGATTTGACATGTACTTATAGAGTTAGAGCTAAT
TTACGATTTATGACGTCATAATTTGACGACGTCACAATTGACACTTTCTT
TAAATGATTAATTTTTAGGTTAATATTTAATTACGTAACACCGGGTCCTG
AAACTTTAAGGTATAGGTCATCTTTTTGAAGCCGGAACTCTTTGAAAATC
GCCGTAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCG
AGCTGTACTTAATATTTTTTATGAAATATTGCATACTGATGCAAAATGAC
AATACCTAAAATGTCACGGAGCCCGATCTAAAAAAAAAAAAAATTTTCCG
GCCGAAAATGCCGGAAATATGCTGGAAAACTGGTTTTTTGACATTTTCTC
GAATTTTCATCCTGTCTGATTTTTTTTCAGAAAGATGCGTATTCGCAATG
CTCAAAACATGACAGAATTCGATTTTTGAGAAAAAAATTTTTCCGGCCAA
AAATGCCGGAAATTTCCGTTTTTGCAGATTTTCATTGGATTTTTTCGTTT
TATGTCCTTTTTTTCAAACATTATTTATAAGAATGTCCACGATTAAGCAT
GTTTCAATTTTCAATGAAACTGATTTTGGTAAAGGAACTTTCTAAAAATC
GCCAGAACAGCCGAGAAGCCGGATTTCTTGAATTTCTCTATTGTTGTCAT
TTTTCAATTGTCTTATTACATCAATCTTCAGGTAGGTCCATTCAGCATGT
AGCTTGTTACATTAGTATTCTAAGATACTTTTGAAGATTGCTTTTAAATT
GTTTATCACGCATAAAATGGCAATGAAACTCATCCAATATAACGCTAATT
GAAGTTTTTCTTAAAGAAAGATTATTTTTGTTGAATCATTTTAGAAGTGA
CAAATGATGATGGTGGTAATGCTAACATAGCAAATAATGGTAAAATTTTC
ATGTTTGTACTTTTTATTCTTCCTTAGAATAAGACAATTTTCTCCTCAGA
TTTATATTCAATTTAGGGAAATCTTGATCCTGGTGGGAATAATCCAAAAA
ACGCGAAAGTTTCTGCCCGCGGTTTTTAAGAATTTTAACAAGGATTTATC
TCCCGTTTTCTATTCTCATTCATTTGTTCAGCAGATATAATCGTAATCAA
AGATGAAGACGAAGAAGAAGAATTACAGCAGCCTTCGGCAACATGTAAAA
TCCTTGAGTTCTTTATATGAAAACCTCTTCGCTTTATTATTATACAAGCG
CTTATCTTTCTTATTAGTATTAGCATACTTATCTAAACGAATCAAGATTG
AAAATTCTAACCTTTCTTCTGGATAATTATAAACAGAAGAATATTTTTCT
GACATTGTTGATGATACGCGTACGAACATCTTCCAATGTCTATAGCAATA
TCTTTCTTCTTTCTCTTGTAGATGATGATCACGAATACGATACATATTCA
ACTTTTGCAACAGGTACAGATCAATATTCAAAAAATGATTTTGATTTGAA
GGTGCCATACTTGGCTTAATGATTAGCTCGTAGATCTATTGCTTGCTTCT
ATCTCCCAGCTTTATGTCATGTCAGTAACGTGACTTAAGTCAAGTATCTA
AAGAGTTTTATAGACAATGAGTAAAATGTTTCAAACAATTAAAAACTAAT
GACAGACTAAATTTTGTGGAATTCATTATGTATCTGACATGGGAAAGTGT
CTATTTAGAACGCTTATGACGAGGTATCCAGCGCAGCTAACAAAAGACAA
ATAGAATTTCTAATATACAATTCCCGTCGTCGCAAATGTCGGTTTGGATT
ATGCATCGGTAGTCGATATCCGAAATTCTATCTTTACTTAACTGAAATTC
GAATTAGCTTCTTCGTGAAGTTTGACGGTGATTTCAATTTAATTGAAAAC
GCGAACTTATTAAGCAGTAAAACGCCAATAAGTTAGAGAACGTAAACTGT
ATTATCAGTGTAAATTTTAATGGAAGAGAACAGTAAAAAATAATGCTCAT
TTAAGTGTTAATTTTCTCGCTCAAGCATGAATGAAAAATAAAATCTTAAA
CTTACAAATAAAACCAGGACGTACATACACAGCTTTCTCGAAAGAAAATA
TTTGTCCACATCTCCATTAAACACTTGGTGATCGATGTCAATCCTCCAGC
GACTTTCAATGAAGTTTGCATGATTGAAGTACAACTATCAGGAAAAGATT
TACTCGCTGTTACATGCATTTATCGAAGCCCAACCAGATCTACGTCCTCT
AACGAAAATAACAACAACCTAAACTTATTAAACAAGTCCATTGCATTAAA
CAAGAAATATTCGCACAAATGTTTGTTAGGTGATTTCAACTTTCCAACAA
TCAATTGGGAAAACTGGACCACCCTACATCTGGAGGATAGCAAAGAAGAG
AGATTCTTAAATGCTTTGAGAGACGCATATCTACATCAACATGTTAATGA
ACCAACTCGATGTAGAGGAACTGATGACCCATCCCTCATCGACTTGATCT
TAACAGGCGAAGAAAACCAAATTAGGAATCTCGACTACCTAAGACCACTA
GGAAAAAGTGACCATAGTTCGTTGGCTTTCAATTTCGTTTGCTACGTTTA
CTCCAAACCTACGCAAACAAGGTTTGCAACATCTATGGCCAATTTCAAAT
TAATGAAGAATTACCCGACGTTGAGGGAATGGAAAGAAGGTTTAAAAAAT
GCATCCGTGAATAAATCAGTGGAAGATCTTTGGGAATCGTTCAAGAAAGT
TGTCATTGATCTCTTTGAAAGAAGTTGGAAATGATTTTTGGAGGAAAAAA
GGTAAAGTTCCAATTAAGAAGAATCTTCAAGATGAAATCAAGTTAAATAA
AACGCTCTATAGAAGGTGGTTAAGATCTGCACCTCTCGACAGAGATCGTC
ATCGTGTCAATTACACTATTGTAAGAAACAGAGTTAATCGTTTGATGTCA
AAGGCCCACAGGAAAAAAGCATTTGTGATAAATCCAAGGAAAAGCCAAAG
ATATTTTGGTCTCAGGTAAGATCTAAACTTAAGTCATAAGCGCAGTCTCA
CCACTACTTGAAAACCCTGATGACAAATCATCGATTAAACACGACGATCT
CGACAAGGCTAACATCCTACAAAAACAGTTTTGCAGCGTCTTTACCAATG
AGCCTCCAGGAACGATCCCCGACCTTCCTACACGAACTNAGCATCTTTAC
CAATGAGCCTCCAGGAACGATTCCCGACCTTCCTACACGAACTGAGAATC
AAGTTGAGAACATCATCATAACAGAAGATATGATGAGAAAACAGATAAAA
TTGCTGGACGTGAGTAAATCCTTCGGTCCGGATGATATACGTGCCATTTA
TCGCCCAAAACCTTGCGATAAATTATAGACCTGTTAGATTGACTTCAGTA
GTCTGTAATGTACAAGAAAGTACATTATGAAGCATCTAACTGACGAAAAG
CTTCGAACCAACCATCAATACGGTTTCATTAGTCGCCGCTACAACGTCAC
ACAACTCCTAAATTATTTGGACAAGTGCTGTGAAAGTATAGCTAACGGAA
CTGTTGTGGACACTGTATATTTCGGTTTTGCGAAAGCCTTTGATACTGTT
CCCTATCGCCGTCTACTTAAAAAGCTTAAAGGATATGGAGTATCTGGAAA
CATCTTGAGATGGGTAGAGTCTTTTCTGACTGACAGAAAACAATTGGTTA
AGGTTAACCAAACTCGATCTAAGACGGATGATGTTATCAGTGGTATTCCC
CAACAAAGTGTTTTGGGACCACTTCTCTTTGTTATCTACATGAACGACCT
CCCTGACAATGTGCTGTCTTCGATTCTCCTACTTTAAGGCCAGAAACTTT
CGCAGGCAGAAACTTTCGCGTTTTTCGCGTTTTTGGCCTTCTTTCGCGAA
AGTTTCTGCCAGGTAAGAAATTAAAGTTAATTTCGCGAAAAATGAAATTT
TTCTAAAAATCGCGAAAGTTTTTTCCAAGTTTTAAAAGCCAAGGATTATC
GACTAGGATTCGGAATGGGAGGNATCGCGAAAGTTTTTTCCAAGTTTTAA
AAGCCAAGGAGAGTCGATATTATCGACTAGGATTCGGAATGGGAGAAAGA
AGTGCAAATAATATATTTTTCATTTATTAGCATATCATTCTTTCGATTGA
AGAAAGAAATGAGATTTGAAATAGTTTTTTATTCACTTTCCCTAGCTATT
CGCGAAAGTTATTGCAACTAAAATTAAACATTCACAAAAAACCGCGAAAG
TTTCTTCCGTAAATTTTCTTCAAAAAGTAAAAATCGCGAAACTTAAATCC
GCGAAATTTCGCGACTTTTCGGTCTCGCGAAACTTTCTGCCCGCGAAAGT
TTCTGCCCTTTGCTGACGACACGAAGATTTTCAAAGAAGTCAACTCGATT
GAGGACTCATTGGCTATCCAAAAAGACATACACAAACTTGAAAAGTGGTC
AAATTATTGGCTATTAAGATTTCACCCAGATAAGTGCCACGTTCTCACTC
TCGGTAAATATTGGAATATTGTCCACGCGCACCCTTATTCACTTAGAAGT
GAACAACTTGAGCATGTTTTTGTTGAAAAAGATCTCGGTGTTCTGATAGA
CTCTGACTTATCCTTTGAAGAACATATATCAAAACAAGTGAAAAAATCAA
ATTCCATTCTAGGAGTCATCAGAAGAGGTTTCGAAGACCTAAAAACTTAA
AACTTTCTTCGCTCTGTACACAACCGGCCTCATCTCGAGTATGCCCAATC
TGTATGGTCACCAAAACTACGTAAGGACATCAACTTAATTGAGGGCGTTC
AACGACGTGCCACTAGGATGGTCAGANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAGTCA
GTCACGAAAAACGTCGAATAAAGTTCTGAATACCACGCGCATAAGCATAT
ATTTTTCAAAATGTCCAGAGTACAAGGTTTTCTTTACATATCTCAGCCAA
TTAGAGCTTTACCCGACGTTTTTTATATAAATCTGCTATTAGGAAATTTG
TTTATTAACCGCTCTTATTAATTGAGAACGAAAACATTTGATTAGGAACT
GATATTTTTTTTTACATCCTACATCTTATGTTTCAATAGATGAATAACGC
ATTTCTTATCCTCCTTTCCTTAATCTCTGTTTTAACAACTGACTTTTTGC
TTTTTTATATACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAAC
AAGAGAATGAAATTCAAGGTATTGCCTTTTTCTAAAGGAGTTATTTATTT
GAATTCTTATAACTTTCTTATAACACTTTAAAGGGCCTCTTTATAGGCTG
TGCGCTTACATTTCGGAAGAAGATGGTGGAGTCTTGCAAAAATCTAAAAA
AAAGTTTTCTACTATTTAATTCTTTAATGTTATTNGCGTAGAGAGCGGGG
GGGGGGGGGGGGCTGTGCGCTTACATTTCGGAAGAAGATGGTGGAGTCTT
GCAAAAATCTAAAAAAAAGTTTTCTACTATTTAATTCTTTAATGTTACTT
TAATCGATTCCTGGTTATTGAAAAATCTATATTCTATGTTTTGAGATGTC
TCTCTTTCATTGAACCTTTTCTACGTTTTTCTTTTTTCGTTGAATCATTT
CTACGTTTTATTGTCCCTGATTTGATGGGTAAAGCCTTTCATCCAAGATC
CTGGATGATTGCAATAGATTACTCAGTGCGCGTTGAATAGAATCGGGATT
TGCCCTCACTCACATCGTAATGTTTGTACGCTGTGATACTCGCGGTATAA
GTGTGTATATTCTTATTATGTGCTACACAACCGATTCTCCTTTACAAGAC
AAAAAAGTGCATCTTGAAATCCGAATCATTTTAACACTGTAATATCCTAA
TATGGTGCTTCATGTTCTTCGACATTTTCAGGTTACGGTCAGGTGGAAAG
TCGGTGTAAGTGTACCTTTATATTGTTCACTACCATCCTACCATGATTAC
AATGAAAGGAATTTCGTTTATCTCTTTCATCTGAAATCCCAAAACAATGC
CGATTCTAAGGACCGACTTAAGACTTCAAAATTTACACTAAATAAAATTC
TCAATTATCATCATTCATTTTGGGAAANCCGATTCTAAGGGCCGACTTAA
GACACTAAATAAAATTCTCAACTATCATCATTCATTTTGGGAAAAATCTT
CTTGTTTGATTATTTGACTTCTGCTTAATTTTTAAGATGACCCATGGAAT
AACCACCACGCAAGACGATTCTTGGTGGTTAAACTTTCTGAAAAACGAAA
AATGTACGTGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATATCATA
ATCCTGCTGGCATTGACTTTGGTAAATTTTTATTTTATAGTGAATCTTTA
GATCAGAAAACCTTGTTTAAATTACCACACAGACTATCAAATGACTGTTA
TGTTTTATTTTTCAGACGTTTCTTTGGATTCTTTCTTTGGACCGAACAAC
GCAATTAATAAGAGGGTATCCCTTTACACCGGGGACATACGGTGTCTTGA
AATCGACGCGATAGTCAATGCAGGTACTTGAATTCAACTACTTAGTGCAC
GCCATTCTTGACGAATGAATGCCAATAGGAAAAAGATTACGAAACACTGA
ATGGACATTTCTTAACTGACCTACTGTTTATTTTCAGTGGCTAAGAGTTG
TAAGGATATATTCCCAGGGATACTAGGTTATAGGGTGGCGCGTACTCTGA
GTATCACAAATCGAGCTTAAATAATTAAAAGACAAGCTTTGATCGAAAAC
GCAATCAGGATCGCGCTGACTGTCATATAACAACAATAAACAATTCATGA
CGTAGTTTTGATAAAATACATCGAAGCAGATTATTTGAGATGAAGAGCTG
CATTTTCATATCAATAATTTGTGTGGATTATAAAATATAATTTTTGGAAT
AAGATAAATCTTTGCAAGGTTCTTTTGTAAAAGGCAAACGCATATTTGCC
TCTACGCAGACTTGAGTGATCCTTGGAGCTTAAATTGTCTCTACTTCAAA
GAAATTTTATTCCGAACTCTTAAGAGACAAAAACATAATTGTTACAGTTT
CATTTGAAAAAAATAAGTTAACGACAATATTGTTGCGAATGAGATTAAGG
CGATGGGGTTTATCTAGACCTTTATTCGTTCTCGCGCGTCACATTTCCAA
AATTCGGCAGTAAATATTGCTTTCTATCTGGCGTTTGCGTAAAAACACGC
GGGTCACGTCTTATGGATGTTGAAGGACTCGGTATTTTTAGCCTTTTGGA
AAGTAGATGATAATTTTGATAACCCTTAGAAACCCTTGATTTTCGCACAT
ATCTAGTACCAAATTTGCCTTACGGTGTCGGTGTTATTGATAATCCTAGA
CTGGAGTCGTTTATAATGCGTGTAATACTAATAATACCAATACTAATAAC
AATAATACGGTATTTAGTTTGTATAAACGACTGGAAGGATCCGGTGTTCC
AGCCTTATAGATACAGGGGCTAGCTACGCAGAAACTTGCGTAGCGAGAAA
ACAATTTATCAAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTAGTGCACAAAGGTTTCTAG
ACGACTAAAATTGTTCCATTCATTACTTTTTGCTTTATTTCTACTATGTA
TAAATTAGTCGTCTAGCTTGCTAGACTATGATAATCCATACTCTATACTC
TTTTTTTCCAGCGAATGAAAGTCTTTTGGGAGGTGGAGGAGGTAAGATGT
TTGCCGTTTTAAAGGTTTATATTCTTTGATCTTCCTTTTTTAAGGAACTA
ATCTGAACATAGGTTTATATTTTCTTTTAATTCTCAACTTCAGTTGAGCT
AGAATCTGACAATGTCTGTATGTATGTCTGTATGTCCGTCCGAAAATTTG
GGCAGCCTGGAGACTAAAAAATATTGTTCGATTTGGCTGAAATTTTGCAC
ACTTGCTCCTTGGGTGAATATCTGGGGGTGTTTTTTCACTTTTTAAACAT
TTATATCTGGGGCCTGGGGACTAGTTTTTTGCCAAAACGAGGCTAAAACT
TGGGGCATCCTGGAAACTTCAAAAATTGTTCGATTTGGCTGAAATTGTTC
CTTAGGTGAATTCTTTTTCGGGTGAGTTTTCTCAGAAGTAAGTTATTTTG
AAAGGCTCTGAGGACGAGGACAATATTCTAAAGACACTATTTTAACGTAT
ATAAAAAATGTAAAATGAAGATAAAAACAACCCTAGGTATTCACTCAAGG
AACAGGTGTACCAAATTTCAGCCAAAACGGACAAAATTATAATATTTGCT
ACCTAATACTAAATATTTGAAATGTTACAATTGGGCTTTCGAATAACAAA
ATATCTGAAGTTGAGCCTCGACTATTTCTATTAACCTAAAAGACTTACCA
AGCAAAATGTTTTTTTAAAATGTTTTTTTCTTTTAAGTCATTGATGTATT
ACTTTTATTTGTGATAATTTTGATCTATAATCTTTTGTCTCTTTAGTTGA
TGACGCCATACATAAAGCTGCTGGGGAAAGTCTGAAAAAGGAGTGCGAGT
TGTTGGGTGGTTGTAGACCAGGATACGCAAAGATTTCGGGCGGTATCGAT
TTTTATTTTAGTTTTTGAATCATTGTTCTAAAAAAGAAGTATTTTTTAAA
TCCTGAAAATGATCCTTTGATAGATTTATTTATTTACTCACAAACACAAC
TGTGATCTTCAGATGTAATAGTATATTAGTGAAGACATTAGCCTGATATT
TTATTACCACTTTTCTTCTTTTCATAGGTAGGTCACCGTTTACCTGCTAA
ATGTAAGATAATTTTTCATTTGAATTTAGCCATTTTATAAAGATTTTGAC
AAAGCAAACATAAAACGCCTATTTTTATCGACTAGACGACAATTCTTACA
CAGTAATGGTATTTTCTTGGACAAATCGAAATATCATAAAAAGGCAAGAG
AGGTTGTCATAATTTTCGAATTTAATTTGGTAATTTGGTCTGCAGCCAAC
TTTTTAAGTTGCTAAATTTAAGTAAATTCGACGTGATTTATGAAAAGCTT
CTTCGATGTTGAATATAAGGCAATATCAGTATTAAATTGATTTATAACAA
TTGCGTTCGGTTTGACATCGTTGTTCAATTGCATCGTTGTCAATTTTGTG
TTCGCGTATGCTTCCATTAATATGAAAATTACCAATTACCATTGCTCTTT
TAGATGTAATTCACACAGTTGGCCCTAGAAACAAGGACGGCGAAATTTTG
AAATCGTGTTATACTAATGTCTTTTCTCTTGTTAGAGAAAAAAATATAAA
AACTATTGTAAGTCTATAATTTTCCCTTTTCGAGAATGATTTGCCTTTGT
ACAGCTTTTCCGGCCTTTTCCTCGGATAGGATCTGGAATACTAGGTGCAC
CAAGCTCTAAATTTACTTTGTATGATGGTCGAGGCAATTTTGCTTTTCCA
AGCTTTTGAGCTAGGCTAGAAATAGTCTTTGTCTTTTGATCTTCAATTAT
TTCAAAATCCGTAAGTAGAAACAGTTGATCAATTTCATGTTTCAGGCCTT
TCCGTGTATTGTGACAGGCGACTTTGGTAAGAAATCTAATTTGTTTCTTT
GTACCTTACTTTAAGTGACCTTTTTTTGCTCTAAAAACTTTCAAAAAAGA
TTGGGCTATTCCAGAAATAGTTTGTACACTCTATGTTGAAGAGGTGGTCC
AGGATGGCCAGGAAAATGAAAATGGTTCAGGGCAGTCTTGCTTTTCGAGT
GTAAAAATCCAGAGTGCTCAGTAGATTGAGGTGGAAATTCTGGAGTGGTC
AAAAAATGAACTCGAAAATCTAGAGTATGGTCAATACAATGAGCTCAAAA
ATCCAGGATGGTCCAAAAAATGAGAAATAAAAAACCAAGGGGGTTCACGT
TTCCAAGACCATCTCAACATTGGGAGTACAAAATCTTTCTGGAATAGCCC
AATCTTTACATACTTATGTACTTTTTCTTTCGAAAATTAAAACAAATGTC
TTATTTTTATGTTTCTAGGATTTTCTATCGAAGAAGCATGTAACATTGCT
TTAAAAACAACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTAAGCTA
TCAAAACTGAAAAATGTTTCTTGTTTTTCTGAAGAAAAATGAGATATATT
TTACTGAGAATCGAATGATGAAGAAGTTTTGGCAATATAATTTAATGTTT
GTTTTATTTGACGAGAATTGCCACGAAAAGCATCTTCTCCTCTTGATTGA
AATGTGCTATTTTAATTTACTTTTTTCAGGTGGAGAGGATAATTTTTTGC
GTTTTCGATGAAGACACAAAAAAAATTTACGCAAAATTAATGAAACTTTA
TTTTCCGGCCCCAACGAATCTTACTTTGGATGGATACTTGCCTGGTCAGT
ATATTTTGTATTGTTTGTGTTTTTGTTTGATGTATCTAAAGATACAGAAT
ATACCAGCTTTTCAAAAACGGGTGAAGGCTTGACACTCAAATGATTTGCT
CTTAAGGGGTGCGGCAAGTATGAATGAGGATCTGAAAACTTTGTTCAGTC
AAACATTCAAAACCACATTGTCTTTTGCTTGAAAGCGAAAGCGATTGGGT
TTTATTGTAATGTTCTGATGCAATTATTTTACTCAAAATCACAAAACCAC
ATTTTGATATTGATCCAAACTTTGGATGAAACCACTAACCTGGGACTATC
CTATTTACTAATAAGCCATTGTATCGTGAGTAAATTATCAAACAGGCGTG
ATATCACCTCGATAAAAACTGTGAGAGTCACAGTATACGAACAACAAATA
TTCTATTCAGCACACATTAAATGAATATAAAAGTAACCATGGCAATCGTC
CAGGATCTTGATAAACTTAGGAAACCCAGTGGTCTCTGAACACAACACGA
AGATCATTCTATAATAAGGAATCATTTAAATTAATGTTAAAGAATTGAAA
ATTTATTAATGAATGGGTAACTAATTTTAGGGAACTAATTTTACCGATAT
TTGTTTAAGCTGAACATGAAAACAAGTACTCTCCATCTTCGAATAGTCCG
TCGCCACAGGTTAACTTTTAAAACTGTGGTGCTCACGGTAGTATCATGGC
CTTCAGAGGAGATACTATTCATGGGCGGAGTGCCTTAACTATAGGAAATA
ATACAATACATTGTTTCACTTTAATAAATGAAAATCATTTTTAATCTTAA
TGTTTTTTTGGTTTTGTCCTAGATGGTTTTACAGAAAATTCGTACAGTGA
TATTCTTAGTTTTTGCAATGGTTTTCCTTCTTCCACTCTTATAGAATGTT
GGAATCAACGAAAAAGGACGAGAGTAATGAGTGGAGATTGGGACTGATAT
TTTTTTATTTTATTTATTTAATTCGTTTACACAAACATTGTTAGAAATTT
TTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040556XLOC_040556Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064658-exon-scaffold_420-1575043694:24453..24514TCONS_00064658-exon-scaffold_420-1575043694:24453..24514Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:24096..24146TCONS_00064658-exon-scaffold_420-1575043694:24096..24146Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:23782..23838TCONS_00064658-exon-scaffold_420-1575043694:23782..23838Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:22776..22820TCONS_00064658-exon-scaffold_420-1575043694:22776..22820Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:22521..22583TCONS_00064658-exon-scaffold_420-1575043694:22521..22583Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:22252..22293TCONS_00064658-exon-scaffold_420-1575043694:22252..22293Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:18247..18300TCONS_00064658-exon-scaffold_420-1575043694:18247..18300Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:17560..17583TCONS_00064658-exon-scaffold_420-1575043694:17560..17583Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:17144..17278TCONS_00064658-exon-scaffold_420-1575043694:17144..17278Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:16942..17049TCONS_00064658-exon-scaffold_420-1575043694:16942..17049Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:15524..15553TCONS_00064658-exon-scaffold_420-1575043694:15524..15553Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:14673..14768TCONS_00064658-exon-scaffold_420-1575043694:14673..14768Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:14463..14487TCONS_00064658-exon-scaffold_420-1575043694:14463..14487Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:13958..14061TCONS_00064658-exon-scaffold_420-1575043694:13958..14061Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:13689..13719TCONS_00064658-exon-scaffold_420-1575043694:13689..13719Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:13173..13246TCONS_00064658-exon-scaffold_420-1575043694:13173..13246Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:12871..12985TCONS_00064658-exon-scaffold_420-1575043694:12871..12985Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1575043694:11861..11970TCONS_00064658-exon-scaffold_420-1575043694:11861..11970Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:24453..24514TCONS_00064658-exon-scaffold_420-1510915933:24453..24514Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:24096..24146TCONS_00064658-exon-scaffold_420-1510915933:24096..24146Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:23782..23838TCONS_00064658-exon-scaffold_420-1510915933:23782..23838Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:22776..22820TCONS_00064658-exon-scaffold_420-1510915933:22776..22820Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:22521..22583TCONS_00064658-exon-scaffold_420-1510915933:22521..22583Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:22252..22293TCONS_00064658-exon-scaffold_420-1510915933:22252..22293Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:18247..18300TCONS_00064658-exon-scaffold_420-1510915933:18247..18300Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:17560..17583TCONS_00064658-exon-scaffold_420-1510915933:17560..17583Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:17144..17278TCONS_00064658-exon-scaffold_420-1510915933:17144..17278Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:16942..17049TCONS_00064658-exon-scaffold_420-1510915933:16942..17049Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:15524..15553TCONS_00064658-exon-scaffold_420-1510915933:15524..15553Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:14673..14768TCONS_00064658-exon-scaffold_420-1510915933:14673..14768Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:14463..14487TCONS_00064658-exon-scaffold_420-1510915933:14463..14487Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:13958..14061TCONS_00064658-exon-scaffold_420-1510915933:13958..14061Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:13689..13719TCONS_00064658-exon-scaffold_420-1510915933:13689..13719Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:13173..13246TCONS_00064658-exon-scaffold_420-1510915933:13173..13246Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:12871..12985TCONS_00064658-exon-scaffold_420-1510915933:12871..12985Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1510915933:11861..11970TCONS_00064658-exon-scaffold_420-1510915933:11861..11970Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:24453..24514TCONS_00064658-exon-scaffold_420-1491911889:24453..24514Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:24096..24146TCONS_00064658-exon-scaffold_420-1491911889:24096..24146Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:23782..23838TCONS_00064658-exon-scaffold_420-1491911889:23782..23838Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:22776..22820TCONS_00064658-exon-scaffold_420-1491911889:22776..22820Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:22521..22583TCONS_00064658-exon-scaffold_420-1491911889:22521..22583Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:22252..22293TCONS_00064658-exon-scaffold_420-1491911889:22252..22293Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:18247..18300TCONS_00064658-exon-scaffold_420-1491911889:18247..18300Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:17560..17583TCONS_00064658-exon-scaffold_420-1491911889:17560..17583Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:17144..17278TCONS_00064658-exon-scaffold_420-1491911889:17144..17278Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:16942..17049TCONS_00064658-exon-scaffold_420-1491911889:16942..17049Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:15524..15553TCONS_00064658-exon-scaffold_420-1491911889:15524..15553Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:14673..14768TCONS_00064658-exon-scaffold_420-1491911889:14673..14768Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:14463..14487TCONS_00064658-exon-scaffold_420-1491911889:14463..14487Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:13958..14061TCONS_00064658-exon-scaffold_420-1491911889:13958..14061Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:13689..13719TCONS_00064658-exon-scaffold_420-1491911889:13689..13719Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:13173..13246TCONS_00064658-exon-scaffold_420-1491911889:13173..13246Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:12871..12985TCONS_00064658-exon-scaffold_420-1491911889:12871..12985Clytia hemisphaericaexon
TCONS_00064658-exon-scaffold_420-1491911889:11861..11970TCONS_00064658-exon-scaffold_420-1491911889:11861..11970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:11861..24514 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.075	7.05905	0.810587	9.3606	2.79219	1.85261	0.701716	1.91169	0	0.091239	6.35617e-10	1.3011e-07	0.659044	0	0.77511	1.30155	0.901291	0.984191	0	0.653391	0	8.62297e-10	0.509092	1.74199	0	0	1.81267	6.74251e-07	0.01998	2.02435
Blast
[Close]
BLAST of TCONS_00064658 vs. Swiss-Prot (Human)
Match: MACD2 (O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sapiens GN=MACROD2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.347e-46
Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 3 
Query:  771 GHRLPAKYVIHTVGP------RNKDGEILKSCYTNVFSLVREKNIKTIAFPCIVTGDFGFSIEEACNIALKTTRDWLEGHHEEVERIIFCVFDEDTKKIYAKLMKLYF 1076
            G+ LPAKYVIHTVGP           E L +CY +   LV+E NI+++AFPCI TG +GF  E A  IAL T ++WL  +H EV+RIIFCVF E   KIY K M  +F
Sbjct:  133 GYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFF 240

HSP 2 Score: 96.6709 bits (239), Expect = 2.347e-46
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:  428 RFLVVKLSEKRKMYVVNHVKMESIEVYHNP---AGIDFDVSLDSFFGPNNAINKRVSLYTGDIRCLEIDAIVNAANESLLGGGGVDDAIHKAAGESLKKECELLGGCRPGYAKISGG 769
            R L + L E+RK Y+ +++ + SI  +       G + + +         ++ ++VSLY GDI  LE+DAIVNAAN SLLGGGGVD  IH+AAG  L  EC  L GC  G+AKI+ G
Sbjct:   17 RLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAKITCG 133
The following BLAST results are available for this feature:
BLAST of TCONS_00064658 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MACD22.347e-4651.85O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sa... [more]
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