TCONS_00064656 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064656
Unique NameTCONS_00064656
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1218

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064656 ID=TCONS_00064656|Name=TCONS_00064656|organism=Clytia hemisphaerica|type=transcript|length=1218bp
GAGCGGTATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACCATG
ACAAATAACGATATAATCGTTGTTGAAGAAGAACCAGAACAACAGCATTC
GGTAACAGCAGATGttgtagaagaagaagaagcagaaGAAGAAGAACATC
AGCCTTTGGCAACAGAAGTGACAAATGATGATGGTGGTAATGCTAACATA
GCAAATAATGATATAATcgtaatcaaagatgaagacgaagaagaagaatT
ACAGCAGCCTTCGGCAACATATGATGATCACGAATACGATACATATTCAA
CTTTTGCAACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAACAA
GAGAATGAAATTCAAGGTTACGGTCAGGTGGAAAGTCGGTATGACCCATG
GAATAACCACCACGCAAGACGATTCTTGGTGGTTAAACTttctgaaaaac
gaaaaatgtaCGTGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATAT
CATAATCCTGCTGGCATTGACtttgacgTTTCTTTGGATTCTTTCTTTGG
ACCGAACAACGCAATTAATAAGAGGGTATCCCTTTACACCGGGGACATAC
GGTGTCTTGAAATCGACGCGATAGTCAATGCAGCGAATGAAAGTCTTTTG
GGAGGTGGAGGAGTTGATGACGCCATACATAAAGCTGCTGGGGAAAGTCT
GAAAAAGGAGTGCGAGTTGTTGGGTGGTTGTAGACCAGGATACGCAAAGA
TTTCGGGCGGTAGGTCACCGTTTACCTGCTAAATATGTAATTCACACAGT
TGGCCCTAGAAACAAGGACGGCGAAATTTTGAAATCGTGTTATACTAATG
TCTTTTCTCTTGttagagaaaaaaatataaaaactattGCCTTTCCGTGT
ATTGTGACAGGCGACTTTGGATTTTCTATCGAAGAAGCATGTAACATTGC
TTTAAAAACAACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTGGAGA
GGATAATTTTTTGCGTTTTCGATGAagacacaaaaaaaatttacgcAAAA
TTAATGAAACTTTATTTTCCGGCCCCAACGAATCTTACTTTGGATGGATA
CTTGCCTGAATGTTGGAATCAACGAAAAAGGACGAGAGTAATGAGTGGAG
ATTGGGactgatatttttttattttatttatttaattcgTTTACACAAAC
ATTGTTAGAAATTTTTCC
Run BLAST on NCBI

transcript from alignment at scaffold_420:11861..24512-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064656 ID=TCONS_00064656|Name=TCONS_00064656|organism=Clytia hemisphaerica|type=transcript|length=12652bp|location=Sequence derived from alignment at scaffold_420:11861..24512- (Clytia hemisphaerica)
GAGCGGTATATGATCAATTTTGGGAGAATATATTCAGTAATGCTACCATG
ACAAATAACGGTATGGTTTATACTACTAAACAAAAGGAAAAGTCAAAATG
ATCTCTTTAAAAAGGAGCTCTTAATTTCAAAACTTCTTCAAAGGGTACGA
CCGCACGAACAAAGAACCCTGAGATTGATCATATTAATTTTGGCATAAAA
ATTCCGTGCTCTTCTTCTTGATATACCTAAGCAAAAATTACGTTTTTCCT
CCTATCGAAGCATCCGAAATTCTCATTAAAATAGAAAAAAATATAATGGT
CCAAATTCAGGGTTTTTAAGAATTTTAACAAGGATTTATCTCCCGTTTTC
CCATTTGTTTGTTCAGCAGATATAATCGTTGTTGAAGAAGAACCAGAACA
ACAGCATTCGGTAACAGGTAAAATCAGAAAGTCCTTCATATAGAAACCTC
TTCGCTTTATTACACGAACACATATCTCAAGGGTTTTTACCTAAACAAAT
CAATAGAATGAAAATTTTGATTTCATTACATTAGCATTCCGTAAGGACAG
TTTTGTGGAAAATATTCGAAATCTTCTTTAGATCCCTAGAAAAAGTATTT
AAGGGGATGATTCTTTTTAAGGATTTTAGAATAAGAATTTGATCTTCTGC
TTTTTTTCTCGTTCATTTGTTCAGCAGATGTTGTAGAAGAAGAAGAAGCA
GAAGAAGAAGAACATCAGCCTTTGGCAACAGGTACATAAAAAACTCTTTT
TTTTGAAAAATTTCATTGAAAAGTTCGGCACCATTAAGATGCGTCTTTGG
TCCAAATTTGACAAAGATTTGACATGTACTTATAGAGTTAGAGCTAATTT
ACGATTTATGACGTCATAATTTGACGACGTCACAATTGACACTTTCTTTA
AATGATTAATTTTTAGGTTAATATTTAATTACGTAACACCGGGTCCTGAA
ACTTTAAGGTATAGGTCATCTTTTTGAAGCCGGAACTCTTTGAAAATCGC
CGTAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCGAG
CTGTACTTAATATTTTTTATGAAATATTGCATACTGATGCAAAATGACAA
TACCTAAAATGTCACGGAGCCCGATCTAAAAAAAAAAAAAATTTTCCGGC
CGAAAATGCCGGAAATATGCTGGAAAACTGGTTTTTTGACATTTTCTCGA
ATTTTCATCCTGTCTGATTTTTTTTCAGAAAGATGCGTATTCGCAATGCT
CAAAACATGACAGAATTCGATTTTTGAGAAAAAAATTTTTCCGGCCAAAA
ATGCCGGAAATTTCCGTTTTTGCAGATTTTCATTGGATTTTTTCGTTTTA
TGTCCTTTTTTTCAAACATTATTTATAAGAATGTCCACGATTAAGCATGT
TTCAATTTTCAATGAAACTGATTTTGGTAAAGGAACTTTCTAAAAATCGC
CAGAACAGCCGAGAAGCCGGATTTCTTGAATTTCTCTATTGTTGTCATTT
TTCAATTGTCTTATTACATCAATCTTCAGGTAGGTCCATTCAGCATGTAG
CTTGTTACATTAGTATTCTAAGATACTTTTGAAGATTGCTTTTAAATTGT
TTATCACGCATAAAATGGCAATGAAACTCATCCAATATAACGCTAATTGA
AGTTTTTCTTAAAGAAAGATTATTTTTGTTGAATCATTTTAGAAGTGACA
AATGATGATGGTGGTAATGCTAACATAGCAAATAATGGTAAAATTTTCAT
GTTTGTACTTTTTATTCTTCCTTAGAATAAGACAATTTTCTCCTCAGATT
TATATTCAATTTAGGGAAATCTTGATCCTGGTGGGAATAATCCAAAAAAC
GCGAAAGTTTCTGCCCGCGGTTTTTAAGAATTTTAACAAGGATTTATCTC
CCGTTTTCTATTCTCATTCATTTGTTCAGCAGATATAATCGTAATCAAAG
ATGAAGACGAAGAAGAAGAATTACAGCAGCCTTCGGCAACATGTAAAATC
CTTGAGTTCTTTATATGAAAACCTCTTCGCTTTATTATTATACAAGCGCT
TATCTTTCTTATTAGTATTAGCATACTTATCTAAACGAATCAAGATTGAA
AATTCTAACCTTTCTTCTGGATAATTATAAACAGAAGAATATTTTTCTGA
CATTGTTGATGATACGCGTACGAACATCTTCCAATGTCTATAGCAATATC
TTTCTTCTTTCTCTTGTAGATGATGATCACGAATACGATACATATTCAAC
TTTTGCAACAGGTACAGATCAATATTCAAAAAATGATTTTGATTTGAAGG
TGCCATACTTGGCTTAATGATTAGCTCGTAGATCTATTGCTTGCTTCTAT
CTCCCAGCTTTATGTCATGTCAGTAACGTGACTTAAGTCAAGTATCTAAA
GAGTTTTATAGACAATGAGTAAAATGTTTCAAACAATTAAAAACTAATGA
CAGACTAAATTTTGTGGAATTCATTATGTATCTGACATGGGAAAGTGTCT
ATTTAGAACGCTTATGACGAGGTATCCAGCGCAGCTAACAAAAGACAAAT
AGAATTTCTAATATACAATTCCCGTCGTCGCAAATGTCGGTTTGGATTAT
GCATCGGTAGTCGATATCCGAAATTCTATCTTTACTTAACTGAAATTCGA
ATTAGCTTCTTCGTGAAGTTTGACGGTGATTTCAATTTAATTGAAAACGC
GAACTTATTAAGCAGTAAAACGCCAATAAGTTAGAGAACGTAAACTGTAT
TATCAGTGTAAATTTTAATGGAAGAGAACAGTAAAAAATAATGCTCATTT
AAGTGTTAATTTTCTCGCTCAAGCATGAATGAAAAATAAAATCTTAAACT
TACAAATAAAACCAGGACGTACATACACAGCTTTCTCGAAAGAAAATATT
TGTCCACATCTCCATTAAACACTTGGTGATCGATGTCAATCCTCCAGCGA
CTTTCAATGAAGTTTGCATGATTGAAGTACAACTATCAGGAAAAGATTTA
CTCGCTGTTACATGCATTTATCGAAGCCCAACCAGATCTACGTCCTCTAA
CGAAAATAACAACAACCTAAACTTATTAAACAAGTCCATTGCATTAAACA
AGAAATATTCGCACAAATGTTTGTTAGGTGATTTCAACTTTCCAACAATC
AATTGGGAAAACTGGACCACCCTACATCTGGAGGATAGCAAAGAAGAGAG
ATTCTTAAATGCTTTGAGAGACGCATATCTACATCAACATGTTAATGAAC
CAACTCGATGTAGAGGAACTGATGACCCATCCCTCATCGACTTGATCTTA
ACAGGCGAAGAAAACCAAATTAGGAATCTCGACTACCTAAGACCACTAGG
AAAAAGTGACCATAGTTCGTTGGCTTTCAATTTCGTTTGCTACGTTTACT
CCAAACCTACGCAAACAAGGTTTGCAACATCTATGGCCAATTTCAAATTA
ATGAAGAATTACCCGACGTTGAGGGAATGGAAAGAAGGTTTAAAAAATGC
ATCCGTGAATAAATCAGTGGAAGATCTTTGGGAATCGTTCAAGAAAGTTG
TCATTGATCTCTTTGAAAGAAGTTGGAAATGATTTTTGGAGGAAAAAAGG
TAAAGTTCCAATTAAGAAGAATCTTCAAGATGAAATCAAGTTAAATAAAA
CGCTCTATAGAAGGTGGTTAAGATCTGCACCTCTCGACAGAGATCGTCAT
CGTGTCAATTACACTATTGTAAGAAACAGAGTTAATCGTTTGATGTCAAA
GGCCCACAGGAAAAAAGCATTTGTGATAAATCCAAGGAAAAGCCAAAGAT
ATTTTGGTCTCAGGTAAGATCTAAACTTAAGTCATAAGCGCAGTCTCACC
ACTACTTGAAAACCCTGATGACAAATCATCGATTAAACACGACGATCTCG
ACAAGGCTAACATCCTACAAAAACAGTTTTGCAGCGTCTTTACCAATGAG
CCTCCAGGAACGATCCCCGACCTTCCTACACGAACTNAGCATCTTTACCA
ATGAGCCTCCAGGAACGATTCCCGACCTTCCTACACGAACTGAGAATCAA
GTTGAGAACATCATCATAACAGAAGATATGATGAGAAAACAGATAAAATT
GCTGGACGTGAGTAAATCCTTCGGTCCGGATGATATACGTGCCATTTATC
GCCCAAAACCTTGCGATAAATTATAGACCTGTTAGATTGACTTCAGTAGT
CTGTAATGTACAAGAAAGTACATTATGAAGCATCTAACTGACGAAAAGCT
TCGAACCAACCATCAATACGGTTTCATTAGTCGCCGCTACAACGTCACAC
AACTCCTAAATTATTTGGACAAGTGCTGTGAAAGTATAGCTAACGGAACT
GTTGTGGACACTGTATATTTCGGTTTTGCGAAAGCCTTTGATACTGTTCC
CTATCGCCGTCTACTTAAAAAGCTTAAAGGATATGGAGTATCTGGAAACA
TCTTGAGATGGGTAGAGTCTTTTCTGACTGACAGAAAACAATTGGTTAAG
GTTAACCAAACTCGATCTAAGACGGATGATGTTATCAGTGGTATTCCCCA
ACAAAGTGTTTTGGGACCACTTCTCTTTGTTATCTACATGAACGACCTCC
CTGACAATGTGCTGTCTTCGATTCTCCTACTTTAAGGCCAGAAACTTTCG
CAGGCAGAAACTTTCGCGTTTTTCGCGTTTTTGGCCTTCTTTCGCGAAAG
TTTCTGCCAGGTAAGAAATTAAAGTTAATTTCGCGAAAAATGAAATTTTT
CTAAAAATCGCGAAAGTTTTTTCCAAGTTTTAAAAGCCAAGGATTATCGA
CTAGGATTCGGAATGGGAGGNATCGCGAAAGTTTTTTCCAAGTTTTAAAA
GCCAAGGAGAGTCGATATTATCGACTAGGATTCGGAATGGGAGAAAGAAG
TGCAAATAATATATTTTTCATTTATTAGCATATCATTCTTTCGATTGAAG
AAAGAAATGAGATTTGAAATAGTTTTTTATTCACTTTCCCTAGCTATTCG
CGAAAGTTATTGCAACTAAAATTAAACATTCACAAAAAACCGCGAAAGTT
TCTTCCGTAAATTTTCTTCAAAAAGTAAAAATCGCGAAACTTAAATCCGC
GAAATTTCGCGACTTTTCGGTCTCGCGAAACTTTCTGCCCGCGAAAGTTT
CTGCCCTTTGCTGACGACACGAAGATTTTCAAAGAAGTCAACTCGATTGA
GGACTCATTGGCTATCCAAAAAGACATACACAAACTTGAAAAGTGGTCAA
ATTATTGGCTATTAAGATTTCACCCAGATAAGTGCCACGTTCTCACTCTC
GGTAAATATTGGAATATTGTCCACGCGCACCCTTATTCACTTAGAAGTGA
ACAACTTGAGCATGTTTTTGTTGAAAAAGATCTCGGTGTTCTGATAGACT
CTGACTTATCCTTTGAAGAACATATATCAAAACAAGTGAAAAAATCAAAT
TCCATTCTAGGAGTCATCAGAAGAGGTTTCGAAGACCTAAAAACTTAAAA
CTTTCTTCGCTCTGTACACAACCGGCCTCATCTCGAGTATGCCCAATCTG
TATGGTCACCAAAACTACGTAAGGACATCAACTTAATTGAGGGCGTTCAA
CGACGTGCCACTAGGATGGTCAGANNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAGTCAGT
CACGAAAAACGTCGAATAAAGTTCTGAATACCACGCGCATAAGCATATAT
TTTTCAAAATGTCCAGAGTACAAGGTTTTCTTTACATATCTCAGCCAATT
AGAGCTTTACCCGACGTTTTTTATATAAATCTGCTATTAGGAAATTTGTT
TATTAACCGCTCTTATTAATTGAGAACGAAAACATTTGATTAGGAACTGA
TATTTTTTTTTACATCCTACATCTTATGTTTCAATAGATGAATAACGCAT
TTCTTATCCTCCTTTCCTTAATCTCTGTTTTAACAACTGACTTTTTGCTT
TTTTATATACAGCAGCCGCGAATGTACTGGATGAGCCAATCGTAGAACAA
GAGAATGAAATTCAAGGTATTGCCTTTTTCTAAAGGAGTTATTTATTTGA
ATTCTTATAACTTTCTTATAACACTTTAAAGGGCCTCTTTATAGGCTGTG
CGCTTACATTTCGGAAGAAGATGGTGGAGTCTTGCAAAAATCTAAAAAAA
AGTTTTCTACTATTTAATTCTTTAATGTTATTNGCGTAGAGAGCGGGGGG
GGGGGGGGGGCTGTGCGCTTACATTTCGGAAGAAGATGGTGGAGTCTTGC
AAAAATCTAAAAAAAAGTTTTCTACTATTTAATTCTTTAATGTTACTTTA
ATCGATTCCTGGTTATTGAAAAATCTATATTCTATGTTTTGAGATGTCTC
TCTTTCATTGAACCTTTTCTACGTTTTTCTTTTTTCGTTGAATCATTTCT
ACGTTTTATTGTCCCTGATTTGATGGGTAAAGCCTTTCATCCAAGATCCT
GGATGATTGCAATAGATTACTCAGTGCGCGTTGAATAGAATCGGGATTTG
CCCTCACTCACATCGTAATGTTTGTACGCTGTGATACTCGCGGTATAAGT
GTGTATATTCTTATTATGTGCTACACAACCGATTCTCCTTTACAAGACAA
AAAAGTGCATCTTGAAATCCGAATCATTTTAACACTGTAATATCCTAATA
TGGTGCTTCATGTTCTTCGACATTTTCAGGTTACGGTCAGGTGGAAAGTC
GGTGTAAGTGTACCTTTATATTGTTCACTACCATCCTACCATGATTACAA
TGAAAGGAATTTCGTTTATCTCTTTCATCTGAAATCCCAAAACAATGCCG
ATTCTAAGGACCGACTTAAGACTTCAAAATTTACACTAAATAAAATTCTC
AATTATCATCATTCATTTTGGGAAANCCGATTCTAAGGGCCGACTTAAGA
CACTAAATAAAATTCTCAACTATCATCATTCATTTTGGGAAAAATCTTCT
TGTTTGATTATTTGACTTCTGCTTAATTTTTAAGATGACCCATGGAATAA
CCACCACGCAAGACGATTCTTGGTGGTTAAACTTTCTGAAAAACGAAAAA
TGTACGTGGTGAATCATGTTAAAATGGAAAGCATAGAAGTATATCATAAT
CCTGCTGGCATTGACTTTGGTAAATTTTTATTTTATAGTGAATCTTTAGA
TCAGAAAACCTTGTTTAAATTACCACACAGACTATCAAATGACTGTTATG
TTTTATTTTTCAGACGTTTCTTTGGATTCTTTCTTTGGACCGAACAACGC
AATTAATAAGAGGGTATCCCTTTACACCGGGGACATACGGTGTCTTGAAA
TCGACGCGATAGTCAATGCAGGTACTTGAATTCAACTACTTAGTGCACGC
CATTCTTGACGAATGAATGCCAATAGGAAAAAGATTACGAAACACTGAAT
GGACATTTCTTAACTGACCTACTGTTTATTTTCAGTGGCTAAGAGTTGTA
AGGATATATTCCCAGGGATACTAGGTTATAGGGTGGCGCGTACTCTGAGT
ATCACAAATCGAGCTTAAATAATTAAAAGACAAGCTTTGATCGAAAACGC
AATCAGGATCGCGCTGACTGTCATATAACAACAATAAACAATTCATGACG
TAGTTTTGATAAAATACATCGAAGCAGATTATTTGAGATGAAGAGCTGCA
TTTTCATATCAATAATTTGTGTGGATTATAAAATATAATTTTTGGAATAA
GATAAATCTTTGCAAGGTTCTTTTGTAAAAGGCAAACGCATATTTGCCTC
TACGCAGACTTGAGTGATCCTTGGAGCTTAAATTGTCTCTACTTCAAAGA
AATTTTATTCCGAACTCTTAAGAGACAAAAACATAATTGTTACAGTTTCA
TTTGAAAAAAATAAGTTAACGACAATATTGTTGCGAATGAGATTAAGGCG
ATGGGGTTTATCTAGACCTTTATTCGTTCTCGCGCGTCACATTTCCAAAA
TTCGGCAGTAAATATTGCTTTCTATCTGGCGTTTGCGTAAAAACACGCGG
GTCACGTCTTATGGATGTTGAAGGACTCGGTATTTTTAGCCTTTTGGAAA
GTAGATGATAATTTTGATAACCCTTAGAAACCCTTGATTTTCGCACATAT
CTAGTACCAAATTTGCCTTACGGTGTCGGTGTTATTGATAATCCTAGACT
GGAGTCGTTTATAATGCGTGTAATACTAATAATACCAATACTAATAACAA
TAATACGGTATTTAGTTTGTATAAACGACTGGAAGGATCCGGTGTTCCAG
CCTTATAGATACAGGGGCTAGCTACGCAGAAACTTGCGTAGCGAGAAAAC
AATTTATCAAGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAGTTAGTGCACAAAGGTTTCTAGAC
GACTAAAATTGTTCCATTCATTACTTTTTGCTTTATTTCTACTATGTATA
AATTAGTCGTCTAGCTTGCTAGACTATGATAATCCATACTCTATACTCTT
TTTTTCCAGCGAATGAAAGTCTTTTGGGAGGTGGAGGAGGTAAGATGTTT
GCCGTTTTAAAGGTTTATATTCTTTGATCTTCCTTTTTTAAGGAACTAAT
CTGAACATAGGTTTATATTTTCTTTTAATTCTCAACTTCAGTTGAGCTAG
AATCTGACAATGTCTGTATGTATGTCTGTATGTCCGTCCGAAAATTTGGG
CAGCCTGGAGACTAAAAAATATTGTTCGATTTGGCTGAAATTTTGCACAC
TTGCTCCTTGGGTGAATATCTGGGGGTGTTTTTTCACTTTTTAAACATTT
ATATCTGGGGCCTGGGGACTAGTTTTTTGCCAAAACGAGGCTAAAACTTG
GGGCATCCTGGAAACTTCAAAAATTGTTCGATTTGGCTGAAATTGTTCCT
TAGGTGAATTCTTTTTCGGGTGAGTTTTCTCAGAAGTAAGTTATTTTGAA
AGGCTCTGAGGACGAGGACAATATTCTAAAGACACTATTTTAACGTATAT
AAAAAATGTAAAATGAAGATAAAAACAACCCTAGGTATTCACTCAAGGAA
CAGGTGTACCAAATTTCAGCCAAAACGGACAAAATTATAATATTTGCTAC
CTAATACTAAATATTTGAAATGTTACAATTGGGCTTTCGAATAACAAAAT
ATCTGAAGTTGAGCCTCGACTATTTCTATTAACCTAAAAGACTTACCAAG
CAAAATGTTTTTTTAAAATGTTTTTTTCTTTTAAGTCATTGATGTATTAC
TTTTATTTGTGATAATTTTGATCTATAATCTTTTGTCTCTTTAGTTGATG
ACGCCATACATAAAGCTGCTGGGGAAAGTCTGAAAAAGGAGTGCGAGTTG
TTGGGTGGTTGTAGACCAGGATACGCAAAGATTTCGGGCGGTATCGATTT
TTATTTTAGTTTTTGAATCATTGTTCTAAAAAAGAAGTATTTTTTAAATC
CTGAAAATGATCCTTTGATAGATTTATTTATTTACTCACAAACACAACTG
TGATCTTCAGATGTAATAGTATATTAGTGAAGACATTAGCCTGATATTTT
ATTACCACTTTTCTTCTTTTCATAGGTAGGTCACCGTTTACCTGCTAAAT
GTAAGATAATTTTTCATTTGAATTTAGCCATTTTATAAAGATTTTGACAA
AGCAAACATAAAACGCCTATTTTTATCGACTAGACGACAATTCTTACACA
GTAATGGTATTTTCTTGGACAAATCGAAATATCATAAAAAGGCAAGAGAG
GTTGTCATAATTTTCGAATTTAATTTGGTAATTTGGTCTGCAGCCAACTT
TTTAAGTTGCTAAATTTAAGTAAATTCGACGTGATTTATGAAAAGCTTCT
TCGATGTTGAATATAAGGCAATATCAGTATTAAATTGATTTATAACAATT
GCGTTCGGTTTGACATCGTTGTTCAATTGCATCGTTGTCAATTTTGTGTT
CGCGTATGCTTCCATTAATATGAAAATTACCAATTACCATTGCTCTTTTA
GATGTAATTCACACAGTTGGCCCTAGAAACAAGGACGGCGAAATTTTGAA
ATCGTGTTATACTAATGTCTTTTCTCTTGTTAGAGAAAAAAATATAAAAA
CTATTGTAAGTCTATAATTTTCCCTTTTCGAGAATGATTTGCCTTTGTAC
AGCTTTTCCGGCCTTTTCCTCGGATAGGATCTGGAATACTAGGTGCACCA
AGCTCTAAATTTACTTTGTATGATGGTCGAGGCAATTTTGCTTTTCCAAG
CTTTTGAGCTAGGCTAGAAATAGTCTTTGTCTTTTGATCTTCAATTATTT
CAAAATCCGTAAGTAGAAACAGTTGATCAATTTCATGTTTCAGGCCTTTC
CGTGTATTGTGACAGGCGACTTTGGTAAGAAATCTAATTTGTTTCTTTGT
ACCTTACTTTAAGTGACCTTTTTTTGCTCTAAAAACTTTCAAAAAAGATT
GGGCTATTCCAGAAATAGTTTGTACACTCTATGTTGAAGAGGTGGTCCAG
GATGGCCAGGAAAATGAAAATGGTTCAGGGCAGTCTTGCTTTTCGAGTGT
AAAAATCCAGAGTGCTCAGTAGATTGAGGTGGAAATTCTGGAGTGGTCAA
AAAATGAACTCGAAAATCTAGAGTATGGTCAATACAATGAGCTCAAAAAT
CCAGGATGGTCCAAAAAATGAGAAATAAAAAACCAAGGGGGTTCACGTTT
CCAAGACCATCTCAACATTGGGAGTACAAAATCTTTCTGGAATAGCCCAA
TCTTTACATACTTATGTACTTTTTCTTTCGAAAATTAAAACAAATGTCTT
ATTTTTATGTTTCTAGGATTTTCTATCGAAGAAGCATGTAACATTGCTTT
AAAAACAACTCGGGATTGGCTGGAAGGTCACCACGAGGAAGTAAGCTATC
AAAACTGAAAAATGTTTCTTGTTTTTCTGAAGAAAAATGAGATATATTTT
ACTGAGAATCGAATGATGAAGAAGTTTTGGCAATATAATTTAATGTTTGT
TTTATTTGACGAGAATTGCCACGAAAAGCATCTTCTCCTCTTGATTGAAA
TGTGCTATTTTAATTTACTTTTTTCAGGTGGAGAGGATAATTTTTTGCGT
TTTCGATGAAGACACAAAAAAAATTTACGCAAAATTAATGAAACTTTATT
TTCCGGCCCCAACGAATCTTACTTTGGATGGATACTTGCCTGGTCAGTAT
ATTTTGTATTGTTTGTGTTTTTGTTTGATGTATCTAAAGATACAGAATAT
ACCAGCTTTTCAAAAACGGGTGAAGGCTTGACACTCAAATGATTTGCTCT
TAAGGGGTGCGGCAAGTATGAATGAGGATCTGAAAACTTTGTTCAGTCAA
ACATTCAAAACCACATTGTCTTTTGCTTGAAAGCGAAAGCGATTGGGTTT
TATTGTAATGTTCTGATGCAATTATTTTACTCAAAATCACAAAACCACAT
TTTGATATTGATCCAAACTTTGGATGAAACCACTAACCTGGGACTATCCT
ATTTACTAATAAGCCATTGTATCGTGAGTAAATTATCAAACAGGCGTGAT
ATCACCTCGATAAAAACTGTGAGAGTCACAGTATACGAACAACAAATATT
CTATTCAGCACACATTAAATGAATATAAAAGTAACCATGGCAATCGTCCA
GGATCTTGATAAACTTAGGAAACCCAGTGGTCTCTGAACACAACACGAAG
ATCATTCTATAATAAGGAATCATTTAAATTAATGTTAAAGAATTGAAAAT
TTATTAATGAATGGGTAACTAATTTTAGGGAACTAATTTTACCGATATTT
GTTTAAGCTGAACATGAAAACAAGTACTCTCCATCTTCGAATAGTCCGTC
GCCACAGGTTAACTTTTAAAACTGTGGTGCTCACGGTAGTATCATGGCCT
TCAGAGGAGATACTATTCATGGGCGGAGTGCCTTAACTATAGGAAATAAT
ACAATACATTGTTTCACTTTAATAAATGAAAATCATTTTTAATCTTAATG
TTTTTTTGGTTTTGTCCTAGATGGTTTTACAGAAAATTCGTACAGTGATA
TTCTTAGTTTTTGCAATGGTTTTCCTTCTTCCACTCTTATAGAATGTTGG
AATCAACGAAAAAGGACGAGAGTAATGAGTGGAGATTGGGACTGATATTT
TTTTATTTTATTTATTTAATTCGTTTACACAAACATTGTTAGAAATTTTT
CC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040556XLOC_040556Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064656-exon-scaffold_420-1575043694:24453..24512TCONS_00064656-exon-scaffold_420-1575043694:24453..24512Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:24096..24143TCONS_00064656-exon-scaffold_420-1575043694:24096..24143Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:23782..23838TCONS_00064656-exon-scaffold_420-1575043694:23782..23838Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:22776..22820TCONS_00064656-exon-scaffold_420-1575043694:22776..22820Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:22521..22580TCONS_00064656-exon-scaffold_420-1575043694:22521..22580Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:22252..22293TCONS_00064656-exon-scaffold_420-1575043694:22252..22293Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:18247..18300TCONS_00064656-exon-scaffold_420-1575043694:18247..18300Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:17560..17583TCONS_00064656-exon-scaffold_420-1575043694:17560..17583Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:17144..17278TCONS_00064656-exon-scaffold_420-1575043694:17144..17278Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:16942..17049TCONS_00064656-exon-scaffold_420-1575043694:16942..17049Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:15524..15553TCONS_00064656-exon-scaffold_420-1575043694:15524..15553Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:14673..14768TCONS_00064656-exon-scaffold_420-1575043694:14673..14768Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:14463..14487TCONS_00064656-exon-scaffold_420-1575043694:14463..14487Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:13958..14061TCONS_00064656-exon-scaffold_420-1575043694:13958..14061Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:13689..13719TCONS_00064656-exon-scaffold_420-1575043694:13689..13719Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:13173..13246TCONS_00064656-exon-scaffold_420-1575043694:13173..13246Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:12871..12985TCONS_00064656-exon-scaffold_420-1575043694:12871..12985Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1575043694:11861..11970TCONS_00064656-exon-scaffold_420-1575043694:11861..11970Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:24453..24512TCONS_00064656-exon-scaffold_420-1510915933:24453..24512Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:24096..24143TCONS_00064656-exon-scaffold_420-1510915933:24096..24143Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:23782..23838TCONS_00064656-exon-scaffold_420-1510915933:23782..23838Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:22776..22820TCONS_00064656-exon-scaffold_420-1510915933:22776..22820Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:22521..22580TCONS_00064656-exon-scaffold_420-1510915933:22521..22580Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:22252..22293TCONS_00064656-exon-scaffold_420-1510915933:22252..22293Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:18247..18300TCONS_00064656-exon-scaffold_420-1510915933:18247..18300Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:17560..17583TCONS_00064656-exon-scaffold_420-1510915933:17560..17583Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:17144..17278TCONS_00064656-exon-scaffold_420-1510915933:17144..17278Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:16942..17049TCONS_00064656-exon-scaffold_420-1510915933:16942..17049Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:15524..15553TCONS_00064656-exon-scaffold_420-1510915933:15524..15553Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:14673..14768TCONS_00064656-exon-scaffold_420-1510915933:14673..14768Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:14463..14487TCONS_00064656-exon-scaffold_420-1510915933:14463..14487Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:13958..14061TCONS_00064656-exon-scaffold_420-1510915933:13958..14061Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:13689..13719TCONS_00064656-exon-scaffold_420-1510915933:13689..13719Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:13173..13246TCONS_00064656-exon-scaffold_420-1510915933:13173..13246Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:12871..12985TCONS_00064656-exon-scaffold_420-1510915933:12871..12985Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1510915933:11861..11970TCONS_00064656-exon-scaffold_420-1510915933:11861..11970Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:24453..24512TCONS_00064656-exon-scaffold_420-1491911889:24453..24512Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:24096..24143TCONS_00064656-exon-scaffold_420-1491911889:24096..24143Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:23782..23838TCONS_00064656-exon-scaffold_420-1491911889:23782..23838Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:22776..22820TCONS_00064656-exon-scaffold_420-1491911889:22776..22820Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:22521..22580TCONS_00064656-exon-scaffold_420-1491911889:22521..22580Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:22252..22293TCONS_00064656-exon-scaffold_420-1491911889:22252..22293Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:18247..18300TCONS_00064656-exon-scaffold_420-1491911889:18247..18300Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:17560..17583TCONS_00064656-exon-scaffold_420-1491911889:17560..17583Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:17144..17278TCONS_00064656-exon-scaffold_420-1491911889:17144..17278Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:16942..17049TCONS_00064656-exon-scaffold_420-1491911889:16942..17049Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:15524..15553TCONS_00064656-exon-scaffold_420-1491911889:15524..15553Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:14673..14768TCONS_00064656-exon-scaffold_420-1491911889:14673..14768Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:14463..14487TCONS_00064656-exon-scaffold_420-1491911889:14463..14487Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:13958..14061TCONS_00064656-exon-scaffold_420-1491911889:13958..14061Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:13689..13719TCONS_00064656-exon-scaffold_420-1491911889:13689..13719Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:13173..13246TCONS_00064656-exon-scaffold_420-1491911889:13173..13246Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:12871..12985TCONS_00064656-exon-scaffold_420-1491911889:12871..12985Clytia hemisphaericaexon
TCONS_00064656-exon-scaffold_420-1491911889:11861..11970TCONS_00064656-exon-scaffold_420-1491911889:11861..11970Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:11861..24512 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.4193	3.7099	3.74419	3.90318	0.03719	0.00690105	0	3.53916e-05	0.0704627	0.103348	0	0	0	0.690211	0	0	0	0	0.00229779	0	0	0	0.885296	0.372941	0.064866	0	0	0	0	0.618079
Blast
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BLAST of TCONS_00064656 vs. Swiss-Prot (Human)
Match: MACD2 (O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sapiens GN=MACROD2 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.371e-46
Identity = 56/108 (51.85%), Postives = 69/108 (63.89%), Query Frame = 1 
Query:  763 GHRLPAKYVIHTVGP------RNKDGEILKSCYTNVFSLVREKNIKTIAFPCIVTGDFGFSIEEACNIALKTTRDWLEGHHEEVERIIFCVFDEDTKKIYAKLMKLYF 1068
            G+ LPAKYVIHTVGP           E L +CY +   LV+E NI+++AFPCI TG +GF  E A  IAL T ++WL  +H EV+RIIFCVF E   KIY K M  +F
Sbjct:  133 GYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEWLAKNHHEVDRIIFCVFLEVDFKIYKKKMNEFF 240

HSP 2 Score: 96.2857 bits (238), Expect = 2.371e-46
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = 3 
Query:  420 RFLVVKLSEKRKMYVVNHVKMESIEVYHNP---AGIDFDVSLDSFFGPNNAINKRVSLYTGDIRCLEIDAIVNAANESLLGGGGVDDAIHKAAGESLKKECELLGGCRPGYAKISGG 761
            R L + L E+RK Y+ +++ + SI  +       G + + +         ++ ++VSLY GDI  LE+DAIVNAAN SLLGGGGVD  IH+AAG  L  EC  L GC  G+AKI+ G
Sbjct:   17 RLLKMTLEERRKEYLRDYIPLNSILSWKEEMKGKGQNDEENTQETSQVKKSLTEKVSLYRGDITLLEVDAIVNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNGCDTGHAKITCG 133
The following BLAST results are available for this feature:
BLAST of TCONS_00064656 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MACD22.371e-4651.85O-acetyl-ADP-ribose deacetylase MACROD2 OS=Homo sa... [more]
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