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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064644 ID=TCONS_00064644|Name=TCONS_00064644|organism=Clytia hemisphaerica|type=transcript|length=354bp
GTCAACATTCTAGcggcagaaattttcatgattaTCATAGTTTTTCAAAA
AGACGAAATTTTCATGATTATGATGATTTTTTGTAAGTGGTTTTGAGCGA
TAGTATATAGATGGGTAAAGATGCTGGAGAAGAAGCGTGATTAGAGCGGG
AAACAGCAAGCAACTCCCAAACAGCAAGCAACAGCCCGACCttgcaaaaa
tcaaaatggaatCATCTAGTAACGTTGAAGCCAACCACTCGAACAATGGA
CTGATGGAACTGATGGAAACTCCATCAGACGATGCCTAAAGTTCCAGTAA
AAGAAattaatcaaactaatcaaacaataatatacaatttttgaagcaat
agcN Run BLAST on NCBI transcript from alignment at scaffold_420:73546..74743+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064644 ID=TCONS_00064644|Name=TCONS_00064644|organism=Clytia hemisphaerica|type=transcript|length=1198bp|location=Sequence derived from alignment at scaffold_420:73546..74743+ (Clytia hemisphaerica)
GTCAACATTCTAGcggcagaaattttcatgattaTCATAGTTTTTCAAAA
AGACGAAATTTTCATGATTATGATGATTTTTTGTAAGTGGTTTTGAGCGA
TAGTATATAGATGGGTAAAGATGCTGGAGAAGAAGCGTGATTAGAGCGGG
AAACAGCAAGCAACTCCCAAACAGCAAGCAACAGCCCGACCttgcaaaaa
tcaaaatggaatCATCTAGTAACGTTGAAGGTAAGAGACTTTAATTAATG
GATGCTGAAATATTTCATCAAATATCTTAACTGCAAGGTCATATAATTAA
ACTGACTCATCCTGCCTGCCATAGCAtagggctattccaaaaaaaacagg
TATTGACCAACTTTTTCCActataaaattttgattaacaaattatcccct
ggaaattagggGGTAGACCCCTCTGGAAAGTGAGggctgttagggttagg
gttagggttagggtgaTCGAAGCAATCAGACagtaaatcctgggtaatag
tcgattgcgattcgattgcgttcgacaatcgaattgcaattattcgattg
cgttcaattgcgttcgattgattcggcgttcgattcgttcgattcgttcg
attcgttcgatttacgctaaagtaaaacaattacgcacatgtaaatgggt
cattgtttgaggtctgggaaaatttccgggagatagcctaccggcagtgc
gcggatctaggtgggttccgcctcccccgtagatctttttcttgggaagt
tgatcttcaaattagttttcaaggttggcttggctcaaattttttcatct
atggcataaattttaggcaatttctcaaagtttttgaaaatgttgatttc
attaaaaagcgccaggttattttttttgcttgagagtcaagtaaacgata
tagcgctttcgcagcattaatctttgatacgcattttggcgggacgctag
tttGGCTAACTGTCTGGGACCTCCCtgaaaaagttcgtcaatacccctgt
atggtttaaaaaatggaatagcccatttagCCTGTTATTGAAAACTGAAA
TCCATCATCTATTATCATCATCAGCCAACCACTCGAACAATGGACTGATG
GAACTGATGGAAACTCCATCAGACGATGCCTAAAGTTCCAGTAAAAGAAa
ttaatcaaactaatcaaacaataatatacaatttttgaagcaatagcN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064644-exon-scaffold_420-1491911889:73546..73775 | TCONS_00064644-exon-scaffold_420-1491911889:73546..73775 | Clytia hemisphaerica | exon |
| TCONS_00064644-exon-scaffold_420-1510915933:73546..73775 | TCONS_00064644-exon-scaffold_420-1510915933:73546..73775 | Clytia hemisphaerica | exon |
| TCONS_00064644-exon-scaffold_420-1575043694:73546..73775 | TCONS_00064644-exon-scaffold_420-1575043694:73546..73775 | Clytia hemisphaerica | exon |
| TCONS_00064644-exon-scaffold_420-1491911889:74620..74743 | TCONS_00064644-exon-scaffold_420-1491911889:74620..74743 | Clytia hemisphaerica | exon |
| TCONS_00064644-exon-scaffold_420-1510915933:74620..74743 | TCONS_00064644-exon-scaffold_420-1510915933:74620..74743 | Clytia hemisphaerica | exon |
| TCONS_00064644-exon-scaffold_420-1575043694:74620..74743 | TCONS_00064644-exon-scaffold_420-1575043694:74620..74743 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_420 | supercontig | scaffold_420:73546..74743 + |
Blast
The following BLAST results are available for this feature:
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