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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064631 ID=TCONS_00064631|Name=TCONS_00064631|organism=Clytia hemisphaerica|type=transcript|length=137bp
TGCAAATGTCAAAATGGTGAGGGAGTGTATCAATAATAAGATTTACCTTG
TCCTGAAAGCAAAGACAGATTTGCCAATCGGTACAGAGCTGAGATATGAC
TATTGTGTTCCCGAAAGCGAGATGTCTTGGCGAAAAC Run BLAST on NCBI transcript from alignment at scaffold_42:42860..44406- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064631 ID=TCONS_00064631|Name=TCONS_00064631|organism=Clytia hemisphaerica|type=transcript|length=1547bp|location=Sequence derived from alignment at scaffold_42:42860..44406- (Clytia hemisphaerica)
TGCAAATGTCAAAATGGTGAGGGAGTGTATCAATAATAAGATTTACCTTG
TCCTGAAAGCAAAGACAGATTTGCCAATCGGTACAGAGCTGAGGTAAGAG
TTAAGGTTATTACTAAAACGAGGAACAAGAAGTAACGAGAAGTAACGAGT
GCTTAAATGGAAGTTACGAGTACCACATAGAACTAAGTAACGAGTACTGT
GAGGCTGCGAAATTGACGCTCCACTATCTTGCTTTTGTCACCAGGGAATT
GTTTTAAGTTTTATGACGTCATTGATAGGTTTACTATTCAGGCACCTATA
TCTCGTGACTGGCTTTTCTGTTTTCTCTCAAATTTGGTGTGTGACAATAA
TGCTTTGAAATTTTAACCTAATCAATTTTTATCAATTTTGGTGATGACGT
CATCATTTGGGCTCTTTTTGGTACTGAAATCCGGACACCTATATCTCGTG
ACTGGCTTGTCTGTTTCCTTTCAAATTTGGCATGTGACACCTGGACAATA
ATGCTTTAAAATTAACCATCAACCTTGCCCTTCTACGACTAAACGAAAAA
ATGGACAAAGTGAAAATTATTTTCTTAGTGAACACTACAGAAGGTTCTTT
CTCCGATGATTTTGTCGGAAATAAGCGATCGCCAACAGTGTGTTTGAAAC
ACGCTGACCTAGTAGATACAAGGTCATACAAACTACATACCGGAAAACTA
TAACACACTCGTAACGTATAATCCATAGCTTGTTTCTTAAAATATTATGT
GTAATGTTTTGAAAATATTAATTGAAAAGAAACAGACAAGTCAGTCACGA
GATATAGGTGCCTGAATAGTAAACCTAGCACTGACGTCACAAAATTTAAA
ACAATTCACTGGTGACAAAAGCAAGACAGTGGAGCGTCAATTTCGCAGCC
ACAGTACTCGTTACTTAATTCTATGTAGTACTCGTTACTTCCATTTAAGC
ACTCGTTACTTCTCGTTACCTGCTCGTTACCTGCTCGTTACTTCTTGTTA
CTCCTTTTAGTAACAACCAAGAATTAAGAAAAATCAATCGGGCTTCCATC
TGAGTGTCTACTAAATCTAATATTTTGAGAGTCCTCGTTTTCGACAGATT
TTCATTTTTTTGTGTTTAAAGTGTTTTGGCAAAATTCTTATTCTATATCA
TTTTCATCGTAGTACGTATGAAAAAGACCGGTCTTGAAGCCTTTTGTTTC
TTCCTGAACAACTCAAATTACATTGGTTTACTTTGCTCCCTTTTTGATCA
TCATGTGATTAAATATTGAACCAATCCTAATAGGAATATTTGGTAACGTT
ATCAAAAACTGAGCAATCAGATCTTTTCCCAGCTGGCACACAACGTTGTT
CAAACGTTCATTTAACGTTAAATGGACGCTGTGAACGTTAGATGAACGTC
GAAAAAACGTTGTGTGCCAGCTGGGTTGTCTATCTAATAAAAAGTCATAA
CAATCGACTTCCTAATCGGGATTTTGCTACATGTCTTGATATTTATTTCG
TAGATATGACTATTGTGTTCCCGAAAGCGAGATGTCTTGGCGAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064631-exon-scaffold_42-1575043694:44314..44406 | TCONS_00064631-exon-scaffold_42-1575043694:44314..44406 | Clytia hemisphaerica | exon |
| TCONS_00064631-exon-scaffold_42-1575043694:42860..42903 | TCONS_00064631-exon-scaffold_42-1575043694:42860..42903 | Clytia hemisphaerica | exon |
| TCONS_00064631-exon-scaffold_42-1510915933:44314..44406 | TCONS_00064631-exon-scaffold_42-1510915933:44314..44406 | Clytia hemisphaerica | exon |
| TCONS_00064631-exon-scaffold_42-1510915933:42860..42903 | TCONS_00064631-exon-scaffold_42-1510915933:42860..42903 | Clytia hemisphaerica | exon |
| TCONS_00064631-exon-scaffold_42-1491911889:44314..44406 | TCONS_00064631-exon-scaffold_42-1491911889:44314..44406 | Clytia hemisphaerica | exon |
| TCONS_00064631-exon-scaffold_42-1491911889:42860..42903 | TCONS_00064631-exon-scaffold_42-1491911889:42860..42903 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_42 | supercontig | scaffold_42:42860..44406 - |
Blast
The following BLAST results are available for this feature:
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