TCONS_00064574 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064574
Unique NameTCONS_00064574
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1678

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064574 ID=TCONS_00064574|Name=TCONS_00064574|organism=Clytia hemisphaerica|type=transcript|length=1678bp
GAAAGATCTATTCACACGATTTAAAAGTCACAGCTTGGGAAGTGTTTAAA
AGCCACTTGAGTCAGTGGTGGGTGACATTTCAAAGATACTGCGTACATGC
AAAAGTTATAAAATTACGCATTGCCTAGGATAAAGTATGATTTTGCTATA
GTTATTTTCCACACGCAAGCTTTTACCTAATGTAAGAGTGAGCGATAACG
AAAAATGCGTACAAAAATGTCTTTCAAGGCGGCAATTTTTATGGTGTTGT
TTTTGAGAACGTCCAAAGCAGCCATTTCTTATGATGACTGTAAGGCTGGC
GATGCAATCTTCAAGAAATCGAAAACAGAGCTTATTATTCATGGATCAGT
GGAATGGGAAGAATCTTTTCAGGTTACAAACGATATGCAATGCTCAATGG
CGTGTAGGAAACATACCAATTGTCAATCGGCTATTGTAAACGAGTCAAAT
ACATGTACTTTAAGGGATGTCAACCGACGTTCAGCTCAAGTTACCTTCAA
ACCAAATCCTTCGTTAAGGTATTTTGAGCGCCACGCATGCCCACCAAGTG
TAGAACAAGCTTTTATAGCTTTCGTATCTGAtgttgaaaattgtaaagac
aTTTACGCGAAGGGTCATTTACAAAATGGTATTTACGCTATCAAGCTAAG
CTCTGGTGTTTACCAGCCAATACGTTGTAACATGGTTAATCAAGATGAAG
GAGGCTGGACTATAGTTTTGAGACGGCTTAGTGGTATAGTGCCATTTGAT
AAAAATTGGGAAACATTCAAATCTGGTTTTGGTTCACTAGATACGGAATT
TTATATCGGGAATGAACGATTCCATCAATTAACTCAAAATGGAactcaaa
agttttttatcaaaatggttTTAAGAGGAGGCAACGTCCGAAATATGATT
TTTGACGAAGTGCGCATTGGTTCCGAAGCTGAAAAATATTCATTGAACAT
AGATTACATGTGCGTCCATCCACGAATGTCAACTATATCAAACATCAAAG
AGATTGCGACACCTACCTCAACAATGTGCGTTAAGTGACGTCATACTTTA
TCAGTATCAAACTGAGGCTATATATAACGATGGGACAACTTTAAGTTGAT
CAATTTGAAAACTGAACTAAACATAAAGAAGAAACGAGACGAAACgctca
aatttgaaaatcaaaGTCAATCACAAAATTACGCTAAATATGGCTCGTCT
ATTTTACCAATTAGCAGTAATTGCCCTCTTAACCAGCTTAATCGAAGgac
GAAGCATCTCCGACaagcaaaatattgagaaacaTCGAAGGTCCAGGCGA
ACTACGCCGTGTATCGATTCATCACAGTTTTGTGTATTGTACACCAAAAT
TCCGAACGCTTGCAACATCATCCAACACTTATGCGCCGCCACCTGCAACC
AATGTGGAGGTGTTATACAACCAACTACAACGAAAAACCCTCCGGTTGTC
GTGGTCACACAACCTCCTACTCAAACGGCAACGACGACCACAAAGGCTCC
CGCAACAACCACCCTTTCTTCAACCACGACGACCACAAAGGCTCCCACAA
CAACCACCCTTTCTTCAACCACGACCACCACAAAGGCTCCCACAACAACC
ACCCTTTCTTCAACCACGACGACCACAAAGGCTCCCACAACGACCACCCT
TTCTTCAACCACGACGACCACAAAGGCT
Run BLAST on NCBI

transcript from alignment at scaffold_419:352397..364326-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064574 ID=TCONS_00064574|Name=TCONS_00064574|organism=Clytia hemisphaerica|type=transcript|length=11930bp|location=Sequence derived from alignment at scaffold_419:352397..364326- (Clytia hemisphaerica)
GAAAGATCTATTCACACGATTTAAAAGTCACAGCTTGGGAAGTGTTTAAA
AGCCACTTGAGTCAGTGGTGGGTGACATTTCAAAGATACTGCGTACATGC
AAAAGTTATAAAATTACGCATTGCCTAGGATAAAGTATGATTTTGCTATA
GTTATTTTCCACACGCAAGCTTTTACCTAATGTAAGAGTGAGCGATAACG
AAAAATGCGTACAAAAATGTCTTTCAAGGCGGCAATTTTTATGGTGTTGT
TTTTGAGAACGTCCAAAGCAGCCATTTCTTATGATGACTGTAAGGCTGGC
GATGCAATCTTCAAGAAATCGAAAACAGAGCTTATTATTCATGGATCAGT
GGAATGGGAAGAATCTTTTCAGGTATAATACGATTATTTCCTTTTTTCAT
CTTAGACACTCACTCACTTAAGAATATTCTTTTCAAAATGGCTCTTCTTG
CTCTGCTGATTGTGAACATCTTCACACCTGTTCCATCCCAGCTGACTTAT
TTAACGTTGTTACAATGTTCACGTTCACCTAACGGTATATGGGTGTTGTG
GAAATTATGTTTGTAGATTTTGAAGATACTGTGACTATATTCTTTCTACT
TAAAGGTTACAAACGATATGCAATGCTCAATGGCGTGTAGGAAACATACC
AATTGTCAATCGGCTATTGTAAACGAGTCAAATACATGTACTTTAAGGGA
TGTCAACCGACGTTCAGCTCAAGTTACCTTCAAACCAAATCCTTCGTTAA
GGTATTTTATGATTTGTTACTAACTGTCTAGCTGGAAATATGAATTTTGG
ACAATAGTATTTTTCCCAAGAACTGTTTTATAGTAGTCTGAATCGCAGAC
TACTATAGATTTATTGGGGGTAAAAGATGTATTGTCAAAGGGGTATCGGA
AAAATTTCCATGTCATTATTGGTTGATTTAATGCTTGTCAACTGGGTGGA
TTTCTGATGCTTGTCCAGGGGTGGGTGAAACACTTGTTGGAGAGCCTTTG
TTAGCAACTTTATTGTTTGAAATTGTTTCCATGGTAACGTATTTGGCTTC
ATCAAACAAGTTATAATTATTTTTGAAGAAATATTTCATATTAGTTACTC
CATATCTCAGTTTAAGCACCAAACAATTTACGACGGATGGTTTTAATTAG
GGCGTAACCGATTAAACTTTCTTAGTCTAAATCCTAATCTATGACATGAA
TTTTAAGTAGCAAGTTTTGTGCTTTTTTAGTCCTCAACTTCGAAAATATC
CCATGTAAAACATAAAACTCGTCGTCATGATAGTCTAGCAAGCTAGACGA
CTAATTTATACATAGTAGAAATAAAGCAAAAAGTAATAAATGGAACAATT
TTAGTCGTCTAGAAACATTTGTGCACTAACTCCAAACGAAAGAAAAGTGT
CAATATTTGCAATTATAATTTTTTCCTGCTCAAAATAATTCTTGAGAAAA
GAAATATGTGTGGATTTGTGTATTGAAAGTTTTTCATTTGAGTTGATTTC
GTTTTGAGAGTTTGTTGTTGCTTGATAAATTGTTTTCTCGCTACGCAAGT
TTCTGCGTAGCTAGCCCCTGTATCAATAAGGCAGGAACACCGGATTCTCC
CAGTCGCTTATAAAAACTAAATCCCGTATTATTATTATTGTTAGTATTGG
TATTATTAGTATTACACGCATTATAAACGACTCCAGTCTATCGTCATGAT
TAACCTCGCTGATATGAACGAAAGCGCGGAGGAAGTCATTAACATTCATT
TTCAAACAAGCTTGTCTTTTCATTTTGTAGGTATTTTGAGCGCCACGCAT
GCCCACCAAGTGTAGAACAAGCTTTTATAGCTTTCGTATCTGATGTTGAA
AATTGTAAAGACATTTACGCGAAGGGTCATTTACAAAATGGTATTTACGC
TATCAAGCTAAGCTCTGGTGTTTACCAGCCAATACGTTGTAACATGGTTA
ATCAAGGTAAATATTTTACTCGCCCGCCCTGTCTCCTCGCTTATGACCTT
GTGAATATTTTCAATCCTAGAGGAAACCCCCCCCCCGCCTTTGCGTCAAT
AATTATTTCTGTATTAGCGAANCAATTCTAGAGGAAACCCCCGCCCGCCT
TTGCGTCAATAATTATTTTTGTATTAGCGAAATGTTTTGCAAAATCGATC
CACCAAGAGTTCTTGATGATTCTATGTCAATACAACCAGAGCATAATCAT
ATTAGGTTTGACAAAAAATAATCCAATCCATTTAGTTTTTCCTTTCACGA
ATCTCCAGCTAATAAAATGTTGAAAGACTACCACTACTTTCTGTATTAGC
CACTTTTTTCAGAGTCGTTAAAATTTTCAGGTCTGTTCATTTTTCCCCAA
AAGTTCAAGAAAAAGGACTTATCTGTGATAAAAGATGAAGAACATGCAAT
ATCCGCCAAATAAACGCCACCAAATTTTGATTATTATTCTCCAAATAGTA
TCATCCGCGAAATTCAGTCCCCGTGATTGAAACTAAACTATGCAATTTTA
TCCCATTAAAAGTATTCCTATTTAATTTTCTACAGATGAAGGAGGCTGGA
CTATAGTTTTGAGACGGCTTAGTGGTATAGTGCCATTTGATAAAAATTGG
GAAACATTCAAATCTGGTTTTGGTTCACTAGATACGGAATTTTATATCGG
GAATGAACGATTCCATCAATTAACTCAAAATGGAACTCAAAAGTTTTTTA
TCAAAATGGTTTTAAGAGGAGGTAAGAGATATAGAGATGGTAGAAGAGCG
TATATTTCTTGACTGCACAAAAATTAAAAAGGCGAATTTTATAAAGAAAT
TCCATTTTTAACACTCCCCTCTTCAAACCTTTGGTACATTTTCCATCAAA
GAAATGAATAGGATTAAGGTTTATCGTGTTGNCCTTTGGTACATTTTCCA
TCAAAGAAATGAATAGGGTTAAGGTTTATCGTGTTGAAATTTCTTTACTT
CTTTTTGCCATCATATTTCATACTTTTGGTACGATAGTAATTGACAGTTT
GTATTTTCAAGGTGTAGATATCTTATTTGCTATCTCAGTGCAAATTAAAA
TGTATGAAAATAATACCAATGCCAATGAAAGAAAACTTAATACGTTTTTC
TTCTACATAANATCTTATTTGCTATCTCAGTGCAAATTAAAATGTATGAA
AATAATACCAATGCCAATGAAAGAAAACTTGATACGTTTTTCTTCTACAT
AATATTTCAGGCAACGTCCGAAATATGATTTTTGACGAAGTGCGCATTGG
TTCCGAAGCTGAAAAATATTCATTGAACATAGGTAACTATCTTGCCCCAT
GAGTGATTGCCAACTTGGTCAAATGTGTCACTGCTACAAAACATAGGTTT
GTGGTCCGAATCCCCGCTCTTTCCCCATGTTCCATTCAGTTCATAGATAG
CCCAGCCGGTTGGCTACGGACCCTGTAAAAACAACGAAAAAAAATGTCTA
AAAAGTCCTAGATTACTGGGCTACGCATGTAAAGTAGCGACTTTATCTAT
CTATAGGTGATGCAATGACTGGTTCTTACGACACCTCAGGAGGTAAATTG
AAGAACCAGAATGACGGAAAGAAATTTACTACTTATGACCAGGATAACGA
CAATTCAGGTAATTATCTCTTGTAGTTTCCAGTGCTCAGACCACGACAAT
GCGTAGAGTTACGGATTTCGCCCACGTGGTCATTTAACATCTTTTCAGTA
CACCCGATCATCACCGTTGATTTTTCCTTTATTATCTCTGTACATACAGT
TTTGAGCTTTTTAGAAAGGTCGAGAATATTTGCTGACGTAGCAATAATAT
ATGCGAAAATTTTTGGCCTTTTTTCGCTTACATTTCATGGAGAAAATGCA
AAGTCGGATCGCTGTGCCCTGAGAAAAACCTACAAATTTGTTGAAATTAT
TTTCAAAGTTGTCTTTATCTCAGGCAATTATATTTTTCGAATTCAAATCT
ACTAAACTTTTTCTAAAAAAACGTTACAAATCATATTGCCTAGACTTTGA
TAGGTATTTTAATATCTGTAAAAGATAACATATACAAAGTATAGAATATT
AAAGGTTCTTAACTTCCCATAAAACACGAGTAAATTAAACCACCGGGAAC
GAAATATTATACGCATCTGAATTTTAAATAATTTCAGATAACATCAATTG
TAGTCACAACAATGAAAATCACGGATGGTGGTATCAAAGATGTGGTGCTG
TAAATCTTCATGGTGTTTGGAGTCATACTAATGGTGGGTCACCCGGAATC
CGCTGGAGTGGAGTCGATGATGTCAATGGGCAAAGTGAAAACATTGAAAA
GGTTTATTACTACATCAAGTGACTTTCAAACCTGTGCATGATGGTCTGGT
TGAAAATTGACCGTTTTTTTGTGTTTTTTTTCTTTCAAATCGTGCAAGAT
TTTTTTGTATACCCAACTTCAGTTGAGCTAGAATCTGAGAATCTCTGTCT
GTCTGTATGTCTGTCAATCAGTCAGTCTGTCTGTCACCTCAAAACTTTGG
GGCAGGCCGGAGTCTTCAAAAATGGTCGGATTTGGCTGAAATTTTGCACA
CTTGTTCCTTGGGTGAATATCTGGGGGTATTTTTTTTCATTTTTTCAAAA
TTTTGACATTTAGGGGCGTGGTACTTTTAGGGACGTAGTACTTTTAGGGG
CGAGTTTTAGCTTCAAAACGAGGCTCAATATTTTCTTCTTTTTCAATTTT
AATTTTTTATGTTTTATGAGTAGTTTAAAAGATAGTGAAGTTGAGCCAGT
GCGTTTATAACGTTCGACATTTTAGGAATATTGAGTGTAATTTTTGGATT
TATAAAGTTATAAATCTCTTTAAAGAATTGACTTGATAATTTAATTTATA
CCGTTTTAAATGTTTTTAAAGATAACCTTTTCTCTTCAGTTTGGAAAAGA
GCATATTCGGTGAGGTTTTTAACAAAATCTTATTACAGACCGGCAGGAAT
CAATAAATCTATCCTTCCTTTCGTAACTTTTTTATATTCTTTTTTTTAAT
AAATTGTGTAACTCATAAATTTTGTATATACTTTACCTTATGCAGTACGC
AATGCTGATGAGTCCCAATAAGGACGAAATGCATACACCTGCTCTGTCAG
CCAAACCTCCTAATGAGTATAGTTGGACAAAACTTTATGATTTTCGTTAA
TATATACAACTTTTCTTTAATCTCAGCCATTGAGTTTTAAGCCCGAAATG
CTAGAATAGAATTTCTAACCTTTCCCAGGCAAGGTAAAATGAAGCCACTC
ATTTCCCATCCAAAAGTTTCTACTCTAGCCCCTTCGGGGCTTTAAACTCA
ATGAAGTCAGCCCACATGTAAATAGTACACTTATTTAACACTTTATTACA
ACACTTAATTATTTTGAAAAAAAAAAACTGTTTAGGAATTATCGTCCTGA
CATATGATTAAAGTTTTAAATTCTCGCTTTTCTGGCACCACCTGATGAAG
ATTCCTTTTAATCAGAGAATTGATAATCCACCATTATTTCTTCAGTATAC
AGGAAAGTTAAACCCGACTGAGATATTTCCAATTCAAAGAGCGACGACCA
TTTCCGATGAACGATAGGGTTGATAGTTGTCTACTCTTTAGCTGGAGTGT
GGAGTAGCAGATACCATTTTGGAATTTTTAGTTGATCCGGAATAAACGGC
TCCAGTTTAGCTATCCCGCTAAACGTATCAGTACGGCTTCAGTTTAGCTA
TCCCGCTAAACGTATCTGTACCTCCCAACGAACGACATTTCAAAGAGCCA
CACCCTGTGTGGCGTTTTGTCCTTTTTTGGGCTTCGCGATCCTCTTAAGG
TATAAATTTCATTCATTTTCTTTACAAGCGGTGGACGAACCTTTTGGATA
CCCCTGGAAAATAGCAAAATTTGTGAAAGAACCCTTTGAAAAATTCTTTA
TGTAGCTTAAAGTGAGGATGAACGAACTAAAATCCACATTTTACCCCCTG
AAAGTTTTAGGTAAACTTTCCACACCCTGGAAAGACCCTTTGGAAATTAT
TTTCTAATTCTAATCCCTGGAAAAGTTTGTCCACCCCCTGTTAGATATGA
AATAGAATGGCCCATTCTGGGCCCATTAATTACTACACGGTTCTTAACTT
TTTGAGTTTTAAGCTTAAAAATGTTCTTAGCATGTTCTCATTTGCACCAT
TTTGTAAGTATTTTTGCCTATTCTCCTAAGAAATCGGGTGTTTAAGGGTC
TGCAAAGCCCATTTTAAGGCTTCTTAACATTTTGACCATCAAAGCCTTGT
GTTCTTATATAAAAAAACATGTATCAAGGTTCATTTACTTAGTAGCCATT
CGGGCGTAATTGAATTTGAAACTAATTCAATTTAGTTGCTCATTGGAAAT
CTTCATTTCATGCATTTTTTGTACAATATTTCGATCATTTAATATGTCTC
CGATGTCATCAAAGGCAGAGAAAAAAATCTAAGCCCACGTTCATTCCGTG
ATGTGTATTTTTTACAATAACACCGAATACAATAGGCTGTCTGAATTCAA
TTATTGTGTGCAGAAAACTATGCGCAGGTAGTATCAGTTTAACGCAAATT
CTGGCCCTTCTGATCAACACATTTCCCAAAAAACGAATTTACACAAATAA
CGGATTTTTAAAAGAACAAACCTTGTTGCTAGGTTACCCTCCCGTGCTTT
AAATATCATCTCTGCGCATGGGTAGTTAATGTTATCTTATCGTCCCTTAT
CTATAAACATGCTATAAAACAAAGTTACATTTCATAACTCAACAAGATAA
CACGTGTGACATCTTTATTACCATGGTAGCCAACAAATGAAAATATTTTT
CGTATTTATCATCAAACGACCTCAAACGTTGCGGTCTTTTTTTTTTACTT
TCCATGTCACCGAAAAAAAAACCTAGGGGCGATTTTTTCGCCAAATCGAG
ACTAAAACTTTGAGACAGCCTGGAGACCTCAAATATGGTAGGCTTGGCGG
AAATTTTAGACACTTGTTCCTTGGGTGAATATCTGGGGGTGTTTATTTTT
ATTTTTCTTCCACCCTATTATTTAAAAAACATCTTCGATCGGGCCTCTGA
GTTAGTTCGAAAAATACTGAAGTTGTGGTGCCCAGTGCGTTGCACACGTT
CGACATTTTTCGATTTTACACCAACTTAAATGGCAATTTCTGCATTTTAA
AAAGATTAATGTATAACTTTTTTTATATGTCCTGTTAAACCTAACTTTTT
AGANNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAATTGAAATGAAAAAA
TTAAATGAAGAAGAAAACGAAGAGTTTTTCGAAGAAGAGTATTTCACCTT
TCAAAGCCCTAATATTGATAAAAATCAAACATTTTGGATTTTTTTTTTGG
TTCAGGTGATGTATCTATTTTAAAAGTATCTAAAAACATAATTTCGGAAA
ATTTTTGTGGAAGTATCTTTCCTTTAAAATCTCCAAAAACCCTCATTTTT
GGCAATTTTCTCCATTAAATTTCCATAGGAAAACAGCTATAACTTGGGAT
GTAACCAAATAGAAAATTTTTCCGAAAAAATCTAAATAAAGAAATTATTT
GTCATTAACTTAAAAAAAGTTTGAAACAATAAAATGAATAGCATCGTTAC
GATGTTTTATTAAGATCCATGCCACACTTATTCCTTAATTACTCATGATG
TAATTACTTAAATTCATTTTTTCAAAAGCAGTTTGTTCTTAAACATGTCA
AAGAAGCGAAAACATAAGGTTTTATCTTCAAATTCTGAAATTGATTTTTA
ACTATGACCAGAGCCCTTCAACCTGTTGGATTCCTAAGCTTTACACCATC
ACATAAGAAATAGAAACTTTTGTCTAAAGCTCGGCTATGCTCTTACCTAA
TTTTTGTAATTTCCGGCTTAATTATTTAAGCTATATATATATATTTGATA
CGCCTGCTTTATTGATTTATTGGTTAAAAAGGACTTGAAATTTTTGTAGC
CATTTGGTTTGGGTCGTTCTTCATTATTTATCGCCCATGTTGTTTGTATA
AAAAAGCCGTGCGAACATAAAAACCCAACTTATTTAAACTGGTGATTTTA
AATTCCCGTTTACAATAAAGTTCTTACCGAGTTACTGATACAGGGCTGTC
CTCCTTTTGAAATATTGTTCAGGCCGCGGTTCAGGCTGCATTTAAAAAAA
TGCCGGTTTGTCGTTCACTTGACCCAAGACTTTGAAGGTGGGTCTTTCGG
TCGGGAAAAACTTTTATGAAATTTATAAAAAACAATAGTCGATCAATAGG
TGACTTTAAAAGGAGATGAAAGCGGACGATCGAGCAAGTAGGGAATTTAA
GATTCTTAAGCTTCAGAAAGAACGGGACAAACAAGAAACGGGTTTTGATT
TAAAGATTTGAAATATTTGAAGAAAGAAGATTTTTTCTTTGAAATAATAA
TTTTTTTTTGTGTCGTCAGGTTTCGAGGTAGGGTCGGGTGATGGCCAAAT
CGTAATTAGCGTGTCCAATAATAAAAATAAATAGTCCAGCTTAATTTAGA
GGTTATTAACTGTGTTTCATTTTTATCTTTGATTTTCTTATAATCATGCT
TTGATCTCATTTTTATCTCTCGCCCTACCACTAGATTACATGTGCGTCCA
TCCACGAATGTCAACTATATCAAACATCAAAGAGATTGCGACACCTACCT
CAACAATGTGCGTTAAGTGACGTCATACTTTATCAGTATCAAACTGAGGC
TATATATAACGATGGGACAACTTTAAGTTGATCAATTTGAAAACTGAACT
AAACATAAAGAAGAAACGAGACGAAACGCTCAAATTTGAAAATCAAAGTA
AGTTTTTCTACGATTTCAGAGATATTTTATTGACGCCTCTTACATCAATG
CTGCTCTGAAAAATCTTAAATTACAGTAACAGTTAAAATTAAGCTATGAA
ACTCTTCAGTGATAAGAAACAACAAAAATTTATTTANAATGGGGGGGGGG
GGGGGGTGGACAATCATTTTCAGCTGAATGACCAAGAATCTTCTACTCGT
TTTCCTATATTCCTATATATTTTCCTTTTTACTGAAGCGATAAGCTTGAT
TATATTCCAAAGGTTCGAACGAATTTTGATGTTTTCAGGACCCATCATTG
CTGATGAAAATTTTCGAATGCTTAGGATAATGTTTCCGTTCGTTCGTTTC
GGTTAGAGTAATTATGTGTGTGCATTTGCCCTCATCATGAGTTTGTCTAC
ACGTTTTTTATAAATATAAACTATATAAGAACATAAGGCTTCGATGGCCA
AAACCTTAAGAATAAGTTAAGAATATTTTAAGACTTTGCAGACTCTAAAA
CACCTGATGTCTTGGACACAAATGGTGAAAACAAGAACATTTTTGGCTTG
AAACTCAAAAAGTTAAGAACGTCCGAAATTTTGGATATTCTTATAAAAAA
ACGCGTACTGGTCAAACCCGAAAAAATTATTTTGTAGGGGTAGACTTTTC
TATCGATAATTTTGATTCTGGATAGAATCTTTTCCTAATTTTAATTTATT
TCTTTTGTCTATCAGGTCAATCACAAAATTACGCTAAATATGGCTCGTCT
ATTTTACCAATTAGCAGTAATTGCCCTCTTAACCAGCTTAATCGAAGGTA
ATTTATCACCTTATCAAATATGCTATGATTTCCAAACGTAATTTCAAATG
TCCGCTCAGAATGTCGAGCAAGATTTGAAAGTGAAAACTTGAACCAACTT
TCCGGCTGTTGCCACAATGTTTAGTAATTGCGTCCAATAATGAATATTTT
CAGATGCCTTCTGAAATGTTAGTCTATATTGTTTACCGTCAACAATTTTA
GAATTCGGTTTCTTTTGAGGAAGTTAAATCTTTAAACCGCAAAAATAATC
TCGTTTTCATTATAGTAACCCTTTGAGGGGCAAAGAGCACCTAAAGTGGC
CTAATTCAAGCATTAAGCAGGGTTTTTTTCAAAAAAACGATATCGAAACT
TTTTTTTAAAGAAGAAATGAAAAAGAAGAAATGCTTGAATTAGGGCACTT
TAGGTATTCTTTAAAAGGGTAAAGGGGTCACAATAATGACAACGAGATTC
TATATCGGTTGCATAATTGATAATGAGTTCTCAATAGGTTACGAATTCTA
ATTTACAAGAAAGCATTTATCACTGGACCCGATCATATACGAATGTCCTT
TCCATCATGAAAATGGCTTATTGAAAGAGGGGAAGTTTTGGTGTAAACTA
TAATGACTAACTTACAAGTGTTACATGTGTTAAATTTTGGTTTTGGTTTT
GGTTTGGCAAAGTCTGGTTTTGATTGCAGTATTTATTTTCATTTTAGGAC
GAAGCATCTCCGACAAGCAAAATATTGAGAAACATCGAAGGTCCAGGCGA
ACTACGCGTAAGTTTTAGGTCCAACACAGAGTAAGGTATAACAGTAACTC
TCTATAACTCGAATAACAAGCATGAGACGAAATGACCGAATTGTCGATGA
TAGAGTACTGCATACTACCGTAATAGCATTCTCTAGTGGCAATCTCGTTC
TTGGTATAATGAGATGTGTCATTATCTATCATTCGCTATTGTATCTTTGT
CCCCAAAACGCATCCTTACAATGCACACAGCTAGCTAAAAGGATACCCTT
ATAATGCACCCTAACAAAAGTACACCCTCACAGTGCATTTTCGAAAAACC
CTTTAAGGGCGGCACATGTCCCGGAGTTATGTCATTGTTTTAAATTTTTA
ACCTTAATTTTAATTTTTTCAATCTTTTTCTTTACAGCGTGTATCGATTC
ATCACAGTTTTGTGTATTGTACACCAAAATTCCGAACGCTTGCAACATCA
TCCAACACTTATGCGCCGCCACCTGCAACCAATGTGGTAAGACAATTTTT
CTTGATTTTGGTGAAAGATATTCTCGAAAAGTTGGCTTTGCTAACGAAAA
GGGTTTGAGAAATAGACTCAACATTTTTTTATAAGCACTTTTTATGAGGT
AAATTTTGAGGTAAACTAGCTTATGTATGTGTAACGGAGACTGTTAGTTT
CTGGTTTGTCTAAAATTCCAATTGGCTTAAATCATTCAGCCGTTCCCAGA
ATTTCAATAAATAAACTCGCTAACTGTTTTTTCGGAGGAGGAGAAAGAAT
TGAATGTTGATTCCCGAGCATGTTAATTATTGCATGATGCATTATTCATA
AAACTTATGTATGTAGCATGAGAAGTAACGAGTCAGTAAAAAGAAACGTT
AAAGTGGTTAATATTTTTTACAATCACAGGAGTGACGGTGGGAAAGTCTT
AAAAATTGAAACTAATAGTCTAAAACAAGTTAGAGTTCCTTAGAAAAACC
GATGATATGGCCTCACTCCCATTTCCAAGGATTTCTTTCTCATTTGCTTT
GGTTCTGATAAGCTTTAATCATTAGGTGGTGGATGACGTATACTTAACAT
CTAGAAAAGTGTCATTTATTGATAATCCATCGAGGGGCTTGCTTGGCACG
ACTTTTAACCAAATTGTCATCCTTGTTTGCCATAATTTGAGCAACGATGC
TAAAATTTTTACCTCGAGACCATTTTAGAGAATCCATCTAAGTTTGATGA
TTGCTACGTAATAGAAAAATGCTAAAGAAAACATTCTTTCGTCGAAAAGT
TTGTGGAGATTCTGATAAATAAAATCTAAAAGGAGCTTTTGGTTTTCCAT
GAAAACAGGAGGTGTTATACAACCAACTACAACGAAAAACCCTCCGGTTG
TCGTGGTCACACAACCTCCTACTCAAACGGCAACGACGACCACAAAGGCT
CCCGCAACAACCACCCTTTCTTCAACCACGACGACCACAAAGGCTCCCAC
AACAACCACCCTTTCTTCAACCACGACCACCACAAAGGCTCCCACAACAA
CCACCCTTTCTTCAACCACGACGACCACAAAGGCTCCCACAACGACCACC
CTTTCTTCAACCACGACGACCACAAAGGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040496XLOC_040496Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064574-exon-scaffold_419-1575043694:363955..364326TCONS_00064574-exon-scaffold_419-1575043694:363955..364326Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:363576..363721TCONS_00064574-exon-scaffold_419-1575043694:363576..363721Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:362371..362546TCONS_00064574-exon-scaffold_419-1575043694:362371..362546Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:361606..361791TCONS_00064574-exon-scaffold_419-1575043694:361606..361791Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:361045..361116TCONS_00064574-exon-scaffold_419-1575043694:361045..361116Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:355530..355742TCONS_00064574-exon-scaffold_419-1575043694:355530..355742Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:354730..354811TCONS_00064574-exon-scaffold_419-1575043694:354730..354811Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:353970..354029TCONS_00064574-exon-scaffold_419-1575043694:353970..354029Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:353491..353589TCONS_00064574-exon-scaffold_419-1575043694:353491..353589Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1575043694:352397..352668TCONS_00064574-exon-scaffold_419-1575043694:352397..352668Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:363955..364326TCONS_00064574-exon-scaffold_419-1510915933:363955..364326Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:363576..363721TCONS_00064574-exon-scaffold_419-1510915933:363576..363721Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:362371..362546TCONS_00064574-exon-scaffold_419-1510915933:362371..362546Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:361606..361791TCONS_00064574-exon-scaffold_419-1510915933:361606..361791Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:361045..361116TCONS_00064574-exon-scaffold_419-1510915933:361045..361116Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:355530..355742TCONS_00064574-exon-scaffold_419-1510915933:355530..355742Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:354730..354811TCONS_00064574-exon-scaffold_419-1510915933:354730..354811Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:353970..354029TCONS_00064574-exon-scaffold_419-1510915933:353970..354029Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:353491..353589TCONS_00064574-exon-scaffold_419-1510915933:353491..353589Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1510915933:352397..352668TCONS_00064574-exon-scaffold_419-1510915933:352397..352668Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:363955..364326TCONS_00064574-exon-scaffold_419-1491911889:363955..364326Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:363576..363721TCONS_00064574-exon-scaffold_419-1491911889:363576..363721Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:362371..362546TCONS_00064574-exon-scaffold_419-1491911889:362371..362546Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:361606..361791TCONS_00064574-exon-scaffold_419-1491911889:361606..361791Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:361045..361116TCONS_00064574-exon-scaffold_419-1491911889:361045..361116Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:355530..355742TCONS_00064574-exon-scaffold_419-1491911889:355530..355742Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:354730..354811TCONS_00064574-exon-scaffold_419-1491911889:354730..354811Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:353970..354029TCONS_00064574-exon-scaffold_419-1491911889:353970..354029Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:353491..353589TCONS_00064574-exon-scaffold_419-1491911889:353491..353589Clytia hemisphaericaexon
TCONS_00064574-exon-scaffold_419-1491911889:352397..352668TCONS_00064574-exon-scaffold_419-1491911889:352397..352668Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:352397..364326 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.65748	0.493541	0.750427	0.308378	1.98548	1.49271	1.4249	1.0966	0.207352	0.352921	0.391318	0.212118	1.75981	1.52498	0.255718	0.592103	0.34779	0.388822	1.01195	2.26411	0.832679	1.03746	0.811448	1.15632	0.54793	1.15838	0.438019	0.357023	0.912978	0.607854
Blast
[Close]
BLAST of TCONS_00064574 vs. Swiss-Prot (Human)
Match: FCN2 (Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.239e-19
Identity = 44/118 (37.29%), Postives = 67/118 (56.78%), Query Frame = 1 
Query:  592 CKDIYAKGHLQNGIYAIKLSSGVYQPIRCNMVNQDEGGWTIVLRRLSGIVPFDKNWETFKSGFGSLDTEFYIGNERFHQLTQNGTQKFFIKMVLRGGNVRNMIFDEVRIGSEAEKYSL 945
            CKD+  +GH  +G + I L       + C+M + D GGWT+  RR+ G V F ++W T+K GFGS   EF++GN+  H LT  GT +  + +V    N +   +   ++  EAEKY+L
Sbjct:  105 CKDLLDRGHFLSGWHTIYLPDCRPLTVLCDM-DTDGGGWTVFQRRVDGSVDFYRDWATYKQGFGSRLGEFWLGNDNIHALTAQGTSELRVDLVDFEDNYQFAKYRSFKVADEAEKYNL 221
The following BLAST results are available for this feature:
BLAST of TCONS_00064574 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FCN27.239e-1937.29Ficolin-2 OS=Homo sapiens GN=FCN2 PE=1 SV=2[more]
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