TCONS_00064554 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064554
Unique NameTCONS_00064554
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2957

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064554 ID=TCONS_00064554|Name=TCONS_00064554|organism=Clytia hemisphaerica|type=transcript|length=2957bp
AAAAAAAGGACAACCTCTTTTCTATTATTTTGTAATGTAAACATAGCGTG
CTTTTTGAGGTATAATATCATCAACCATCATATAGAATTGATGTGattaa
gaaaatctttaagATAGTAGAAAGAAAACTTAACTGGAGTATTTCTCAAA
AAGTGCTTTAGAGTTTGTTAACTGcggtttttttgttttaatctcGTATC
AAGACGTTTTATATTTGAAATTGCTGTTACCGCCAGAAGTATCAAAAGAG
CAGACATTTGAAGAGGGACATTTTCGGAGAGACTTTACGGAATTCTTAGA
CCAAGCTGAGAGTGAAACCTAACCGCTCTTTGCTCACATTGACACAAAAT
AGAGGAAAATCACAGCTGTCATCTTGTTTTTAAATCTGACAATCCAGAGT
ATTTGAACATTGGCATATTTTAACGACCTAAAAAACTTTTGGGATTGAGA
AATATTAAAGTACCAATCAAAGCAAGGAACTTTAGTAACATTGGGGAAGT
GAAGTAACAAGAAACTTAGCTAAGATAATCCTATGATGGatataaatcaa
atttaaaaaaacaagtTGGGAAGCTATCAACTACCTTTGAAAACGTACCA
GATAAAAGTATCAGAAGACTTAGAAGGAAGGACAAACTGTTCATAAGACA
AACATGAaAAGCCCAATGTATCCAACTTTGGAAGACGTCTTCACAAATGG
AATCAACGATAACATCAATTGGATCAGGATTCAAAAACCATTCGAATTTG
ATTCACAACAATTTCAGCTTGGTAAACTTCTCTACGTTCCAAACAAAGCA
TTCACGAAACGACGTGATTCCCTGACTTGTTATGGTTTTCCTGATGGGAA
TCTCCATTTGTTACCTTACAACATCGAAGGGGATTTCTTGAGTTGCGAAA
AGAATGGTGAGGTGGCAGGGAATCTATTTACATTGGCTATTGACGAACAT
AACAACGTTGATGTTCAAATATCCGTCACCGACAAAAACGCAAACAATAA
TGACGTCGTTAAAGGACTAAATGACGTCACTTTGATGGAAGAAGTTGGCG
ACTTCTTCCGAAAATCGTCCTCGTCATCTTATGAGAAAAACGtcgaaaat
cttttaaacagcgATGAACATTCAAACAATGTGAGTACTAACAAATACAG
CCCAAAGCTTATTCTTAGAAACTCATACCCAGGAAACTCAAAGAGACGAA
ACGCCCCTGCTTATGAGAATGTCACACTAACAACAGCTAATAACGAGGAT
GGGCGGACTCCAACCAAACCAATACCACGCCCAATCAAAACAGTAGGGAG
TATTACAACAAATGCATTTGACCAAATTGATGCATTGATGGAGCAGGGTC
GCGATAATGCAGCTGAGCtgtcaaaaaatcatcaaaatattcaCCCAATC
CCAATGAATAATGATAAAACCAAATCTCTGCCAGCTACTATCCATAATGG
TACCTTAGCTATAAAGCCGGAATCTTGCGAAAGAGATCACAAAGTTCTAA
CACTGAATAACGAGAAAACATTTACTTCTTATTTCAAAAAGACAGATACT
CACGTTACAACcaaacatccaaaattcaatAGAACgccttcaaaacaatt
tgatAAACGATTTAGTATTTACGGCGACCGAGATTATGTTCAAATTTCTA
TGGAAACGTTTGAAAAGCGTGCAACATTACACCATCAAAACAGTATGAAT
TTAACTCAAGAAGACTATGAAGATATGACTCATCCGGAGGTCGTAATCCC
GCAGTTTTTCCAACCGGAAGAAATGTTCACGGTCAAATTACGGACACGAG
CTAAAAGTGCGACTCTGATACGGAAAAAGACGAAATCACCAAGTCTAAAG
GCTAAAACCAAGGAACGTTTGTCAAAGTCGAAAAGCATAGCTGACTTGGA
TGGAGATTTTTCTACAGAAGAGTTGAAATCATTATCGGATATAAACCCtc
gaaaaaataaagaaatgtcttcgaaaatgaagaaatcgAAAAAGCAGGAG
GGTGGTGATCAAAAGAGAAGGACTACAGGTAAAACTATTACGCCTTATGA
ACGCCTTATGGTGGAGGTAGCAAATTTTGAAGATGATGAGGAAAACTTTG
ATCTGGAGGAATGGGACGAGTGTAGGCTATCAAGACGAAAAGGTTTTAAT
CGGTTCGAAAGTCGGTTGGTCTATCACACTATACACGGTTGGCAACCAAG
ACAAAACGAAAATGACGTGGGTGCTAAATTAACGTTTGCCGAAGATTACT
CTACCCAGGGATTACACGTATTTTTAAAAGATGCCCTGGGTAATGAAAGT
CTTGCGAAATATATGAAAGATTATCATGTTGATGGATATTTAATGAAATA
TATTGTTATGGATGACTTGATATTGGACGATCAAATGTTCGACCAATCAT
TCTTGACTATCGAAGAACTGAAAAGGTTACGATCAGCTTTTTATCCTAAC
CGATTGAGATGCTTTGCAATGGATTCAGATACAGCACAGGAACTGAAAAG
TAAAACTGTGCAACGATTATgaattcatgacgtaatattttctaCGGAAA
CGGCGTTCGCTCGTAGTGACAAAGCGTTAAGttagagaaaatattttaaa
aacgcTACTACTGGAAAACATAAGCAGGGGTTTTTCGGTAGAAAATATTA
AGTAATGAATACCATGAATATGCTTTGATTATAGAAAATTTTATGTGTAG
TTTTCCATAAGCTTGTTTTATGCAATTTTATATTCACAATAACTATTAAT
ATTATATATTTAGCCGTAAACTATATCATTCCAACCTCTTTATATTGatt
gataaaaattatatttttatcccAACATATCCAAAGTGTAAATGTTTTTA
ACCTCTCAGCAAGATAATGGTCATTTCAGCAACCCTAAATTTCATCATAG
TAATGTCATTTTTTGGGGAGGGAAAGTTTCAATGTGCAGACAAAAATGAG
AGTCATT
Run BLAST on NCBI

protein sequence of TCONS_00064554-protein

>TCONS_00064554-protein ID=TCONS_00064554-protein|Name=TCONS_00064554-protein|organism=Clytia hemisphaerica|type=polypeptide|length=622bp
MKSPMYPTLEDVFTNGINDNINWIRIQKPFEFDSQQFQLGKLLYVPNKAF
TKRRDSLTCYGFPDGNLHLLPYNIEGDFLSCEKNGEVAGNLFTLAIDEHN
NVDVQISVTDKNANNNDVVKGLNDVTLMEEVGDFFRKSSSSSYEKNVENL
LNSDEHSNNVSTNKYSPKLILRNSYPGNSKRRNAPAYENVTLTTANNEDG
RTPTKPIPRPIKTVGSITTNAFDQIDALMEQGRDNAAELSKNHQNIHPIP
MNNDKTKSLPATIHNGTLAIKPESCERDHKVLTLNNEKTFTSYFKKTDTH
VTTKHPKFNRTPSKQFDKRFSIYGDRDYVQISMETFEKRATLHHQNSMNL
TQEDYEDMTHPEVVIPQFFQPEEMFTVKLRTRAKSATLIRKKTKSPSLKA
KTKERLSKSKSIADLDGDFSTEELKSLSDINPRKNKEMSSKMKKSKKQEG
GDQKRRTTGKTITPYERLMVEVANFEDDEENFDLEEWDECRLSRRKGFNR
FESRLVYHTIHGWQPRQNENDVGAKLTFAEDYSTQGLHVFLKDALGNESL
AKYMKDYHVDGYLMKYIVMDDLILDDQMFDQSFLTIEELKRLRSAFYPNR
LRCFAMDSDTAQELKSKTVQRL
Run BLAST on NCBI

transcript from alignment at scaffold_419:164342..169655-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064554 ID=TCONS_00064554|Name=TCONS_00064554|organism=Clytia hemisphaerica|type=transcript|length=5314bp|location=Sequence derived from alignment at scaffold_419:164342..169655- (Clytia hemisphaerica)
AAAAAAAGGACAACCTCTTTTCTATTATTTTGTAATGTAAACATAGCGTG CTTTTTGAGGTATAATATCATCAACCATCATATAGAATTGATGTGATTAA GAAAATCTTTAAGATAGTAGAAAGAAAACTTAACTGGAGTATTTCTCAAA AAGTGCTTTAGAGTTTGTTAACTGCGGTTTTTTTGTTTTAATCTCGTATC AAGACGTTTTATATTTGAAATTGCTGTTACCGCCAGAAGTATCAAAAGAG CAGACATTTGAAGAGGGACATTTTCGGAGAGACTTTACGGAATTCTTAGA CCAAGCTGAGAGTGAAACCTAACCGCTCTTTGCTCACATTGACACAAAAT AGAGGAAAATCACAGCTGTCATCTTGTTTTTAAATCTGACAATCCAGAGT ATTTGAACATTGGCATATTTTAACGACCTAAAAAACTTTTGGGATTGAGA AATATTAAAGTACCAATCAAAGCAAGGAACTTTAGTAACATTGGGGAAGT GAAGTAACAAGAAACTTAGCTAAGATAATCCTATGATGGATATAAATCAA ATTTAAAAAAACAAGTTGGGAAGCTATCAACTACCTTTGAAAACGTACCA GATAAAAGTATCAGAAGACTTAGAAGGAAGGACAAACTGTTCATAAGACA AACATGAGTAAGTATCTACATCATTGATTTTCAACACCACTTTAGGAGAA TTTTCTTGACTGAGGAGGATATGATAGATAAAGCTATAATACAGGATGAT CCATTACTGATAAAAGTAGTTTTTATAGACTTTCTTACATTGTAGGTGTA ATCTCTTCTAGGTATATATTTTTAATGAGAATATAAGGACGTTCCAGATT TTTGAAGCCTTCATGGATGCACGTGGCTACTCCTAACTGTTTGAGTTTTA CGTCTTAAAAGGTTCTTGACATGTTCCTAATTTCACCATTATGTGACTTG TTTTTGATATTTTGGCCATGGAGACCTTATGCTCTTATATAGTTTGTTCT ACATAAAAAAGTGCTCTTGTAGATGGTTAGTGATTGGGTATTATGATATA CGTAATGTATTAGTTCACGACTTTAGCTGTTGATTAAGTTGATTTTCATC AATTCATTCGCTTATTGTTATAAATCTCAAACTTTTAGATAGATAGGGGT GGTCTCACATCCCTGGTAGACTTCTTTCTCAGAGTGGGGTTAGGTTTCTA TTAAAATCTCAATGGGGATAGAAATTCTATTGTTCCTAGCTTAGAAAATC GGTTTGGACGAGACGATTTTCTTGTATTGAATTTCAAATGAGGAAGAAGT TAAAGTTGGGCTGAAATTGTTGGAGTCGAAATTTTGGTCAAATTATACGG TCGGGTGGAGGTACCACCTGGTCTGTGACACAAGAATTCTTTAAATCAGT TTTTCACTTTTTCACCTCAAACTATTCATCCAACGATTTGTAAGTGTATT ACACAAGTGCATCACGTATATTACTAAAAACCACAAAACAACTTTGTTTT GCTTTTTAAAATGATGATTTAAACATGATGGGCTGCATGTGTTTAAGTGG ACTTTGAACTGTCATTTCTTTTTTATGGATTTTAGCAAATTGCAAATAGT GATGAATTAGAAGGTTCAAAAGAACCAATATCATTCACTTGGTGGGTCTT CTTTTTCCAGAATAGGATGAGTTTTATTACATTATAACATGCCTTATCAC TGGGAAAATATTGAAGTTAATTTTTCAATTACATGTTGCGCAAAAAAGGC TATTTTTAATAAGAACAATTTTATTAGACTATGCTATAGTCTAAGACAAG TTTCATCTAAGAAGAACAAACGTGAAGAAGGGAATTTTCTCGGGGTAGCT GTTGTCGTAAACACAGACTCTATCCGCCGCGAAACATATTACGTTTTATA ATATACAAACTATGTTATATCATAAATATTATACGGACGATAGCATCGTC TACAATTTTATGAGGAGTATGCGGCTAAAAATGTTGAAAAAGAAGAACAA TTTCAAAAAAGCCAAGCCTAGAGTTCGTGCTGAATTTAAAAATAATCTAA AAGTGAAACTAAAGGTTTAAAGCCTTAAAATACTTCATTATTGATTTATT GAAAAATAAGAACAAGATAATAACAATTTGAGGCTAAAAGTGCCAAAAAA ATGAACAGCCGAGTCTGAGCAAAAAGAATACTGGTTCTTTTAAAAAATTA TCTCTTTTATCATTAAGAATATTGTGATTAGACCAACAAGCAAACAAATA ATGAATACCATTAACGGATATTTAATTGGACAACTACAAAATTCCTGGAA AATTGTTAGATTAAAAGAGTACGAAAGAAATTCCGAATAGTGAATTCATC CTCATCATCTTGATCAAAAAAAATTGACAGCGAATTGGTGTTCGATTGAG TTTGATTGTTTGATATCCGTTATCAGCTGGTAACGGTTATTGTTGGATTA GTTCGTCGATTCAATAATTGCTAGAAGAAAGAGTTAGTTGCAGGTTATTA TGAAGTGACTTGTCACATTATGGTAGAACCCACTCATTCCTATCGGATTT CCAACTCTACTCTTTAGTTGCAGATTATTTTGTCATTTTATTGTTTTGCT GTTGTTTAAGTCTTTGGTATGACCAAGTCAGAGATGGAAACCACTCTGTT GTGTACCTTTCCCGAATGCTCTTCCTTGGTCTGAATCAAAGACCTCTATA GATAATTGTAGTGTAGTGGTCATCTTGGTTGCTCCACATGCGACTGAGGT TCGATTCCCACTCGCAGCGGTTCACTTGGCAAGTGAATGAACCTTCACCC GGGCCAACTCATGCCATGCGAGGGGGATTGGGTACTCAGTCCAAGATGCT GACGGGGCCTCATTGAGGACGTCTACAGTTGCAAAAATGAGCCTCAAAGC CTCCTGCGACTTAACCAAATAGAAATAGAAATTCCTTTCAGAAACTCCTT TCGCTAGAGGATTAGCAAAAGCTTTACCTTTGCACTAACGTGTTTGTTTT ATTCTTTTTTTTAGAAAGCCCAATGTATCCAACTTTGGAAGACGTCTTCA CAAATGGAATCAACGATAACATCAATTGGATCAGGATTCAAAAACCATTC GAATTTGATTCACAACAATTTCAGCTTGGTAAACTTCTCTACGTTCCAAA CAAAGCATTCACGAAACGACGTGATTCCCTGACTTGTTATGGTTTTCCTG ATGGGAATCTCCATTTGTTACCTTACAACATCGAAGGGGATTTCTTGAGT TGCGAAAAGAATGGTGAGGTGGCAGGGAATCTATTTACATTGGCTATTGA CGAACATAACAACGTTGATGTTCAAATATCCGTCACCGACAAAAACGCAA ACAATAATGACGTCGTTAAAGGACTAAATGACGTCACTTTGATGGAAGAA GTTGGCGACTTCTTCCGAAAATCGTCCTCGTCATCTTATGAGAAAAACGT CGAAAATCTTTTAAACAGCGATGAACATTCAAACAATGTGAGTACTAACA AATACAGCCCAAAGCTTATTCTTAGAAACTCATACCCAGGAAACTCAAAG AGACGAAACGCCCCTGCTTATGAGAATGTCACACTAACAACAGCTAATAA CGAGGATGGGCGGACTCCAACCAAACCAATACCACGCCCAATCAAAACAG TAGGGAGTATTACAACAAATGCATTTGACCAAATTGATGCATTGATGGAG CAGGGTCGCGATAATGCAGCTGAGCTGTCAAAAAATCATCAAAATATTCA CCCAATCCCAATGAATAATGATAAAACCAAATCTCTGCCAGCTACTATCC ATAATGGTACCTTAGCTATAAAGCCGGAATCTTGCGAAAGAGATCACAAA GTTCTAACACTGAATAACGAGAAAACATTTACTTCTTATTTCAAAAAGAC AGATACTCACGTTACAACCAAACATCCAAAATTCAATAGAACGCCTTCAA AACAATTTGATAAACGATTTAGTATTTACGGCGACCGAGATTATGTTCAA ATTTCTATGGAAACGTTTGAAAAGCGTGCAACATTACACCATCAAAACAG TATGAATTTAACTCAAGAAGACTATGAAGATATGACTCATCCGGAGGTCG TAATCCCGCAGTTTTTCCAACCGGAAGAAATGTTCACGGTCAAATTACGG ACACGAGCTAAAAGTGCGACTCTGATACGGAAAAAGACGAAATCACCAAG TCTAAAGGCTAAAACCAAGGAACGTTTGTCAAAGTCGAAAAGCATAGCTG ACTTGGATGGAGATTTTTCTACAGAAGAGTTGAAATCATTATCGGATATA AACCCTCGAAAAAATAAAGAAATGTCTTCGAAAATGAAGAAATCGAAAAA GCAGGAGGGTGGTGATCAAAAGAGAAGGACTACAGGTAAAACTATTACGC CTTATGAACGCCTTATGGTGGAGGTAGCAAATTTTGAAGATGATGAGGAA AACTTTGATCTGGAGGAATGGGACGAGTGTAGGCTATCAAGACGAAAAGG TTTTAATCGGTTCGAAAGTCGGTTGGTCTATCACACTATACACGGTTGGC AACCAAGACAAAACGAAAATGACGTGGGTGCTAAATTAACGTTTGCCGAA GATTACTCTACCCAGGGATTACACGTATTTTTAAAAGATGCCCTGGGTAA TGAAAGTCTTGCGAAATATATGAAAGATTATCATGTTGATGGATATTTAA TGAAATATATTGTTATGGATGACTTGATATTGGACGATCAAATGTTCGAC CAATCATTCTTGACTATCGAAGAACTGAAAAGGTTACGATCAGCTTTTTA TCCTAACCGATTGAGATGCTTTGCAATGGATTCAGATACAGCACAGGAAC TGAAAAGTAAAACTGTGCAACGATTATGAATTCATGACGTAATATTTTCT ACGGAAACGGCGTTCGCTCGTAGTGACAAAGCGTTAAGTTAGAGAAAATA TTTTAAAAACGCTACTACTGGAAAACATAAGCAGGGGTTTTTCGGTAGAA AATATTAAGTAATGAATACCATGAATATGCTTTGATTATAGAAAATTTTA TGTGTAGTTTTCCATAAGCTTGTTTTATGCAATTTTATATTCACAATAAC TATTAATATTATATATTTAGCCGTAAACTATATCATTCCAACCTCTTTAT ATTGATTGATAAAAATTATATTTTTATCCCAACATATCCAAAGTGTAAAT GTTTTTAACCTCTCAGCAAGATAATGGTCATTTCAGCAACCCTAAATTTC ATCATAGTAATGTCATTTTTTGGGGAGGGAAAGTTTCAATGTGCAGACAA AAATGAGAGTCATT

Coding sequence (CDS) from alignment at scaffold_419:164342..169655-

>TCONS_00064554 ID=TCONS_00064554|Name=TCONS_00064554|organism=Clytia hemisphaerica|type=CDS|length=3738bp|location=Sequence derived from alignment at scaffold_419:164342..169655- (Clytia hemisphaerica)
AAAGCCCAATGTATCCAACTTTGGAAGACGTCTTCACAAATGGAATCAAC
GATAACATCAATTGGATCAGGATTCAAAAACCATTCGAATTTGATTCACA
ACAATTTCAGCTTGGTAAACTTCTCTACGTTCCAAACAAAGCATTCACGA
AACGACGTGATTCCCTGACTTGTTATGGTTTTCCTGATGGGAATCTCCAT
TTGTTACCTTACAACATCGAAGGGGATTTCTTGAGTTGCGAAAAGAATGG
TGAGGTGGCAGGGAATCTATTTACATTGGCTATTGACGAACATAACAACG
TTGATGTTCAAATATCCGTCACCGACAAAAACGCAAACAATAATGACGTC
GTTAAAGGACTAAATGACGTCACTTTGATGGAAGAAGTTGGCGACTTCTT
CCGAAAATCGTCCTCGTCATCTTATGAGAAAAACGTCGAAAATCTTTTAA
ACAGCGATGAACATTCAAACAATGTGAGTACTAACAAATACAGCCCAAAG
CTTATTCTTAGAAACTCATACCCAGGAAACTCAAAGAGACGAAACGCCCC
TGCTTATGAGAATGTCACACTAACAACAGCTAATAACGAGGATGGGCGGA
CTCCAACCAAACCAATACCACGCCCAATCAAAACAGTAGGGAGTATTACA
ACAAATGCATTTGACCAAATTGATGCATTGATGGAGCAGGGTCGCGATAA
TGCAGCTGAGCTGTCAAAAAATCATCAAAATATTCACCCAATCCCAATGA
ATAATGATAAAACCAAATCTCTGCCAGCTACTATCCATAATGGTACCTTA
GCTATAAAGCCGGAATCTTGCGAAAGAGATCACAAAGTTCTAACACTGAA
TAACGAGAAAACATTTACTTCTTATTTCAAAAAGACAGATACTCACGTTA
CAACCAAACATCCAAAATTCAATAGAACGCCTTCAAAACAATTTGATAAA
CGATTTAGTATTTACGGCGACCGAGATTATGTTCAAATTTCTATGGAAAC
GTTTGAAAAGCGTGCAACATTACACCATCAAAACAGTATGAATTTAACTC
AAGAAGACTATGAAGATATGACTCATCCGGAGGTCGTAATCCCGCAGTTT
TTCCAACCGGAAGAAATGTTCACGGTCAAATTACGGACACGAGCTAAAAG
TGCGACTCTGATACGGAAAAAGACGAAATCACCAAGTCTAAAGGCTAAAA
CCAAGGAACGTTTGTCAAAGTCGAAAAGCATAGCTGACTTGGATGGAGAT
TTTTCTACAGAAGAGTTGAAATCATTATCGGATATAAACCCTCGAAAAAA
TAAAGAAATGTCTTCGAAAATGAAGAAATCGAAAAAGCAGGAGGGTGGTG
ATCAAAAGAGAAGGACTACAGGTAAAACTATTACGCCTTATGAACGCCTT
ATGGTGGAGGTAGCAAATTTTGAAGATGATGAGGAAAACTTTGATCTGGA
GGAATGGGACGAGTGTAGGCTATCAAGACGAAAAGGTTTTAATCGGTTCG
AAAGTCGGTTGGTCTATCACACTATACACGGTTGGCAACCAAGACAAAAC
GAAAATGACGTGGGTGCTAAATTAACGTTTGCCGAAGATTACTCTACCCA
GGGATTACACGTATTTTTAAAAGATGCCCTGGGTAATGAAAGTCTTGCGA
AATATATGAAAGATTATCATGTTGATGGATATTTAATGAAATATATTGTT
ATGGATGACTTGATATTGGACGATCAAATGTTCGACCAATCATTCTTGAC
TATCGAAGAACTGAAAAGGTTACGATCAGCTTTTTATCCTAACCGATTGA
GATGCTTTGCAATGGATTCAGATACAGCACAGGAACTGAAAAGTAAAACT
GTGCAACGATTATGAATGAAAAGCCCAATGTATCCAACTTTGGAAGACGT
CTTCACAAATGGAATCAACGATAACATCAATTGGATCAGGATTCAAAAAC
CATTCGAATTTGATTCACAACAATTTCAGCTTGGTAAACTTCTCTACGTT
CCAAACAAAGCATTCACGAAACGACGTGATTCCCTGACTTGTTATGGTTT
TCCTGATGGGAATCTCCATTTGTTACCTTACAACATCGAAGGGGATTTCT
TGAGTTGCGAAAAGAATGGTGAGGTGGCAGGGAATCTATTTACATTGGCT
ATTGACGAACATAACAACGTTGATGTTCAAATATCCGTCACCGACAAAAA
CGCAAACAATAATGACGTCGTTAAAGGACTAAATGACGTCACTTTGATGG
AAGAAGTTGGCGACTTCTTCCGAAAATCGTCCTCGTCATCTTATGAGAAA
AACGTCGAAAATCTTTTAAACAGCGATGAACATTCAAACAATGTGAGTAC
TAACAAATACAGCCCAAAGCTTATTCTTAGAAACTCATACCCAGGAAACT
CAAAGAGACGAAACGCCCCTGCTTATGAGAATGTCACACTAACAACAGCT
AATAACGAGGATGGGCGGACTCCAACCAAACCAATACCACGCCCAATCAA
AACAGTAGGGAGTATTACAACAAATGCATTTGACCAAATTGATGCATTGA
TGGAGCAGGGTCGCGATAATGCAGCTGAGCTGTCAAAAAATCATCAAAAT
ATTCACCCAATCCCAATGAATAATGATAAAACCAAATCTCTGCCAGCTAC
TATCCATAATGGTACCTTAGCTATAAAGCCGGAATCTTGCGAAAGAGATC
ACAAAGTTCTAACACTGAATAACGAGAAAACATTTACTTCTTATTTCAAA
AAGACAGATACTCACGTTACAACCAAACATCCAAAATTCAATAGAACGCC
TTCAAAACAATTTGATAAACGATTTAGTATTTACGGCGACCGAGATTATG
TTCAAATTTCTATGGAAACGTTTGAAAAGCGTGCAACATTACACCATCAA
AACAGTATGAATTTAACTCAAGAAGACTATGAAGATATGACTCATCCGGA
GGTCGTAATCCCGCAGTTTTTCCAACCGGAAGAAATGTTCACGGTCAAAT
TACGGACACGAGCTAAAAGTGCGACTCTGATACGGAAAAAGACGAAATCA
CCAAGTCTAAAGGCTAAAACCAAGGAACGTTTGTCAAAGTCGAAAAGCAT
AGCTGACTTGGATGGAGATTTTTCTACAGAAGAGTTGAAATCATTATCGG
ATATAAACCCTCGAAAAAATAAAGAAATGTCTTCGAAAATGAAGAAATCG
AAAAAGCAGGAGGGTGGTGATCAAAAGAGAAGGACTACAGGTAAAACTAT
TACGCCTTATGAACGCCTTATGGTGGAGGTAGCAAATTTTGAAGATGATG
AGGAAAACTTTGATCTGGAGGAATGGGACGAGTGTAGGCTATCAAGACGA
AAAGGTTTTAATCGGTTCGAAAGTCGGTTGGTCTATCACACTATACACGG
TTGGCAACCAAGACAAAACGAAAATGACGTGGGTGCTAAATTAACGTTTG
CCGAAGATTACTCTACCCAGGGATTACACGTATTTTTAAAAGATGCCCTG
GGTAATGAAAGTCTTGCGAAATATATGAAAGATTATCATGTTGATGGATA
TTTAATGAAATATATTGTTATGGATGACTTGATATTGGACGATCAAATGT
TCGACCAATCATTCTTGACTATCGAAGAACTGAAAAGGTTACGATCAGCT
TTTTATCCTAACCGATTGAGATGCTTTGCAATGGATTCAGATACAGCACA
GGAACTGAAAAGTAAAACTGTGCAACGATTATGAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040488XLOC_040488Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064554-proteinTCONS_00064554-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064554-exon-scaffold_419-1575043694:168999..169655TCONS_00064554-exon-scaffold_419-1575043694:168999..169655Clytia hemisphaericaexon
TCONS_00064554-exon-scaffold_419-1575043694:164342..166641TCONS_00064554-exon-scaffold_419-1575043694:164342..166641Clytia hemisphaericaexon
TCONS_00064554-exon-scaffold_419-1510915933:168999..169655TCONS_00064554-exon-scaffold_419-1510915933:168999..169655Clytia hemisphaericaexon
TCONS_00064554-exon-scaffold_419-1510915933:164342..166641TCONS_00064554-exon-scaffold_419-1510915933:164342..166641Clytia hemisphaericaexon
TCONS_00064554-exon-scaffold_419-1491911889:168999..169655TCONS_00064554-exon-scaffold_419-1491911889:168999..169655Clytia hemisphaericaexon
TCONS_00064554-exon-scaffold_419-1491911889:164342..166641TCONS_00064554-exon-scaffold_419-1491911889:164342..166641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:164342..169655 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.61262 1.46024 0.782527 0.318992 8.69886 7.11945 8.51527 8.59578 2.66932 5.90665 3.32596 4.93022 6.0903 5.29059 4.61121 3.82546 2.37795 2.61458 5.08154 6.02219 1.94897 3.50379 1.849 2.28137 7.48214 6.62244 8.608 7.33249 35.3503 29.9593
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064554 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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