TCONS_00064530 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064530
Unique NameTCONS_00064530
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length126

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064530 ID=TCONS_00064530|Name=TCONS_00064530|organism=Clytia hemisphaerica|type=transcript|length=126bp
AAAAAGGACAGTCTGAAATGTTACATTCTTCTCCTTACGTGTGCTACTTC
TCGAGCAGTCCATTTAGAGTTGGTACCGGACTTGTCAAAAGAATCGTTCA
TCCGTGCATTCAAACGTTTCGTCGCA
Run BLAST on NCBI

transcript from alignment at scaffold_418:154314..154439

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064530 ID=TCONS_00064530|Name=TCONS_00064530|organism=Clytia hemisphaerica|type=transcript|length=126bp|location=Sequence derived from alignment at scaffold_418:154314..154439 (Clytia hemisphaerica)
TGCGACGAAACGTTTGAATGCACGGATGAACGATTCTTTTGACAAGTCCG
GTACCAACTCTAAATGGACTGCTCGAGAAGTAGCACACGTAAGGAGAAGA
ATGTAACATTTCAGACTGTCCTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040473XLOC_040473Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064530-exon-scaffold_418-1491911889:154314..154439TCONS_00064530-exon-scaffold_418-1491911889:154314..154439Clytia hemisphaericaexon
TCONS_00064530-exon-scaffold_418-1510915933:154314..154439TCONS_00064530-exon-scaffold_418-1510915933:154314..154439Clytia hemisphaericaexon
TCONS_00064530-exon-scaffold_418-1575043694:154314..154439TCONS_00064530-exon-scaffold_418-1575043694:154314..154439Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:154314..154439 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064530 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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