TCONS_00064524 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064524
Unique NameTCONS_00064524
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064524 ID=TCONS_00064524|Name=TCONS_00064524|organism=Clytia hemisphaerica|type=transcript|length=169bp
GCAATGATCACCCCGAGAAACCCGTACGGCCTTCCCAAACCAAAAAGGCC
ATAGCTGCGCATCGCAAGAAAAGGCGGGAAAAAGATAGACAAATTTAACT
TCAGCTGATCCTCCGGCCAAAAGAACCCGTCATAGAAATAGTCTCCGGAA
TGCATTGCGCCCTTCAGAT
Run BLAST on NCBI

transcript from alignment at scaffold_418:20315..20483

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064524 ID=TCONS_00064524|Name=TCONS_00064524|organism=Clytia hemisphaerica|type=transcript|length=169bp|location=Sequence derived from alignment at scaffold_418:20315..20483 (Clytia hemisphaerica)
ATCTGAAGGGCGCAATGCATTCCGGAGACTATTTCTATGACGGGTTCTTT
TGGCCGGAGGATCAGCTGAAGTTAAATTTGTCTATCTTTTTCCCGCCTTT
TCTTGCGATGCGCAGCTATGGCCTTTTTGGTTTGGGAAGGCCGTACGGGT
TTCTCGGGGTGATCATTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040467XLOC_040467Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064524-exon-scaffold_418-1491911889:20315..20483TCONS_00064524-exon-scaffold_418-1491911889:20315..20483Clytia hemisphaericaexon
TCONS_00064524-exon-scaffold_418-1510915933:20315..20483TCONS_00064524-exon-scaffold_418-1510915933:20315..20483Clytia hemisphaericaexon
TCONS_00064524-exon-scaffold_418-1575043694:20315..20483TCONS_00064524-exon-scaffold_418-1575043694:20315..20483Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:20315..20483 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064524 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top