TCONS_00064504 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064504
Unique NameTCONS_00064504
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2687

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064504 ID=TCONS_00064504|Name=TCONS_00064504|organism=Clytia hemisphaerica|type=transcript|length=2687bp
AAAGGTATTAACCATCTCAAAAGGTTCAAAGTCCATCTTGAAAGATCGTG
TAACAAGTGTCAAGTAGGAAGACGAAATAACCAGAGAACCACAGACTGAC
AGACCTTCAAGACAAGACCAGACACATATCAACCCCTTGATTATGTCCAT
ATGAATACAAGATTTACTCTAAAGAACTTCACTCAGATCTTCAAAAGATT
TTGTAGTAGAAGTAGAAGCTGCCCAAATCAGTCTGCTGTCACAGTCACAG
AAAGTGAGATCCAAAAAAGACTAATTGACCCTGTTGGTCGAAAACAAACG
TTCCAAAATCTTCATGAAAaaggGCTCACTAGTAAGCAAGTATCAAAATT
GAAGAATGCCAATGCCAATTATGTTGGATCAGCAGTGTTGAtgccatttt
gttttgtacaGAATGAGCTTTCAATTCTTTTTATCATAAGATCTTCATTT
CAACCGTCTCATGCTGGGCAAGTAGGATTTCCTGGAGGAAGGCTAGATGC
TGAAGACAGATCAGTAGAGGATGCTGTATTGCGAGAAACGTTCGAAGAAA
TTGGAATCCCTTCTCATGAGATTGAAATATGGAACAAAGTAGTCTCCGAA
AAAAAGatttccaACTCGCCTATAGGAATCGTCTTTGGTTTTGTCAAAGA
TTTCAATCATGAAAAGCTCAACATTTGTGAACGAGAGGTGCACGATGTCT
TTACAGTCCCTATCAAGGATTTATTGGACCCTTCAAAACATGGATACACT
AAATTTCGCTGGGGAAATCAAATGCCAGTATTTGTTAACCAGCACCGAAA
TGTATGGGGCTTGACGGCCATGTTCACCAATATTTTCCTAAGGTCGCTTT
TCCCTGAGATACATCGTTTATCAACGTTTAGATCACTTCAGAACATGGAA
GAAACTCATAGGTAGCAGAGGCAAGAGACTTATTCTCGAAATTGTTGaca
atatttttctgtttttttgtgGATGTTTCGTTCTGGATTTCCAGAATTTA
TGGCCCTTCGGGAAACTTTTTCTAAGACTGCATTTTTATTTGCGCTTTGT
GACTCGTAGATaaactttcgttttcgaacGTCTGAATTAAGGGGGAAAAT
ATCTATCAAATACCTTTAGATCATCTTAATTCCTCTCTTGCGCTTCAATC
ATCACCGTTCTAATCAAAAAGAACATTCCAAACTTGATAAGAGTGACATT
AAGCCTTTTACAGAAATCAAATACAGTTGCTCTTTAATTCGTccttcaag
gggaattgaattttcatcgaataagggagcttatcgaataatagagcgaG
AAATTCTTGATGACTGGGacttcaaattttatcaaataagggAAGTTATC
GAGtagtagaatgtcgaattagagagcatcaactgtattctattttttaa
attttactgtaaatttttggaatttttataatttattgtttttgtttgtc
aaaGCATGTAAATTGTGACTAACATACTAGCGTAGATTAAATAATTGTTT
GAAAACTTTTATATCTGTTTCGACCGAATAAAAGTTAATTCATGCTATCT
GTAAATTGATCTTTTAGGAGAAAGGGAATCAATAATGGGATATTTTGATA
ATCTTAGATGATTGAAGTGAATGACAAATCATATCATCTACGTTCGATCC
CTTAAAGTGTTTATTCGAGGAGTGTTTCTTGAGTTTCCTTAACACTTAGT
AACCCTCCTCTTTTTGTCACAATTCTATGAGAGAAAACGAAATTTTAAGT
ATGGCTTTTCTGTGTTTTTAACAAGCTTTGTGCTATTGGTagtagattta
ttttttgagagGTGTTTTATATGAAAAGTTTAAGCAAACAAGATTTAGCT
TAATCAACATCATCTTGCTACCTGTCTACCGAAGAGGAGGTTTTTTGAAT
GCCATTCAGACGACTTTGTTGTTATTGTACTGGTATTTTATATGTTTGAG
TTAGCAATGTTTTGATGTGAAAGATACACTACATATTGGTTGAGAAGTTC
ATGAGCTCTGTGCTTTGTTTCTCACTTTGTTTCAGAGAGTCTTAGCAGGG
GATTTGACATATTCTTTCAAGCAAACATTATTATTTTCATTCGTGGCAAA
TGCTCCCATGCAGAATCATTGATCAACGGCAGCAGCGCTTTGCGATATTT
TAAGCGTCATCAATTTACCAAGAGATTGCTTTCGGAGAGTTGTCGAAATA
CgttttgttcagattttgggaaaGATTGAGAATTTAACTGCAGAATTATG
TCTCGCTTATTCATATTCTTCGTGCTTGTACCACTTGTATTTTGCGTGGA
CAACAAAGACAAATCGAGGTACATAAAACGTGTGAAACCAAGAATGAGCA
TGTTAATCAAACCGAACGATACCCGATGGACCATCCAAGGATATCAATGT
GATGGAAGAGATTGTGAGAAAACGTGCGATGCAGAAGGGATATGTACTTC
TTTTAAATGTGACTGCCCTGGGTCTCTTGCCTCTGGGTATATTGGAAACC
CACTGCCGACAAATTGTGAAGTTTCGACTGAACTTTCGTGCAGTAATGTT
TGTTTCCGTGGTTTTTGTAGACAAATTTGTAAAGAAGTGATTGTTAAAGA
TTGTTTCAACATTAATGGTTAACTTTTATAACGCTACCAACTTTTTATtt
ctacacccctgtctcacagcctcggtggaactttttt
Run BLAST on NCBI

protein sequence of TCONS_00064504-protein

>TCONS_00064504-protein ID=TCONS_00064504-protein|Name=TCONS_00064504-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
MNTRFTLKNFTQIFKRFCSRSRSCPNQSAVTVTESEIQKRLIDPVGRKQT
FQNLHEKGLTSKQVSKLKNANANYVGSAVLMPFCFVQNELSILFIIRSSF
QPSHAGQVGFPGGRLDAEDRSVEDAVLRETFEEIGIPSHEIEIWNKVVSE
KKISNSPIGIVFGFVKDFNHEKLNICEREVHDVFTVPIKDLLDPSKHGYT
KFRWGNQMPVFVNQHRNVWGLTAMFTNIFLRSLFPEIHRLSTFRSLQNME
ETHR
Run BLAST on NCBI

transcript from alignment at scaffold_418:158477..167368-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064504 ID=TCONS_00064504|Name=TCONS_00064504|organism=Clytia hemisphaerica|type=transcript|length=8892bp|location=Sequence derived from alignment at scaffold_418:158477..167368- (Clytia hemisphaerica)
AAAGGTATTAACCATCTCAAAAGGTTCAAAGTCCATCTTGAAAGATCGTG
TAACAAGTGTCAAGTAGGAAGACGAAATAACCAGAGAACCACAGACTGAC
AGACCTTCAAGACAAGACCAGACACATATCAACCCCTTGATTATGTCCAT
ATGAATACAAGATTTACTCTAAAGAACTTCACTCAGATCTTCAAAAGATT
TTGTAGTAGAAGTAGAAGCTGCCCAAATCAGTCTGCTGTCACAGTCACAG
AAAGTGAGATCCAAAAAAGACTAATTGACCCTGTTGGTCGAAAACAAACG
TTCCAAAATCTTCATGAAAAAGGTAAAAACTTTTTTTTCAAAGTCCTTTC
ACGTAGCGGCAATGTTCTCTTTTGGAATAGTTAGATCATCTGCAGAGGTG
CCAACTCATTTCTTACCGTAGAATCGGCTAATGTCAACATGCGTCTTTTG
TTTTATTTTGACATAGCTGTAGAGGCTGGTCTTTAAAATAAAAAATCAAA
CATAAACAAATACATACCAAAGTTATCAATCAATCACTAAATTGTACTCT
TCCTATCACGTCACAGATTGTTGATATGTAAGAAATGTGAAGTGGGTTTT
TTTCGAAAAGAAAACTTTAACGATGTAGTCACTAAAAAACTAATTAGCAT
GCTTTCAATTCAACAAAGATACCCAAATCAAAACAACATTTTCATACCGA
GAGACTCCCGCATACCAACATTTTCTCCCCTATAGCAACATTTTTTCCCA
CAGGAAAAAATTTAGCCAAATCTCCCATATTTTCAGGATTTTCTCCTGCA
TCGGATGAGATGGAGTTTTTATAAGATATATACTTTAGGCGGCCATCGAA
AAATTGTTCTATTCGCGTCACCTGCCAGCATCATATTTTCCGCTGATTTT
CTGGTGGGGAGATGCGGAAAAATATTTGTTCTTTTAAATTATAGCTTTTT
TCTTAATCGCTCTGACGCCCATCGAAAAATTGTCTTGTTCACGTCACCAC
CCGTCCCCGATTTACTGGCGTGATTTAAAAAAACCTGGGAATTTTTTCAA
CCGCCCGCCCGCCCGCATATATTTTTAACACCCGTTGCGACGCGAACAGA
GCATTTATTCGATGGTCGCCTTAGTAATTGGTCATTTGAAGTAATAAAAA
TGACGCGCTCTTTAGAAAAAAATAACTAAATTGTTTTGTACTGGTTATTA
ACCAACCAAATCAAATACGAGCTTGTAAAAACTCCATCTCGTCCCTCCCG
CATCTCCCGCATTTCCAAAAATTTTCAGATTTCCTGAAAAAATTCAGAAT
TTGAAATGATTTCTTGATATTTCAACAAAAATATTTGAAAGTTTGAGCAT
TTCGAGTTTTGAAAAAAAAAATTCAAAAGCAAGAAAAATGAAAAATTGAA
TGGTATATAGCTTGGGTATCCAGACTCAAAATTTCAGTAAAAAAACTCCT
ACCTCAACATACAAAGTTTCTAAAATTTTAGAGCTTTGTGCAATGCAACT
AAAAAAGTCTGCACTGGTACAGCTTGAATGACACACTGTTGGTGAACCCT
TGTTGACTGTGTTCGAAAACTTTGGAAACCCAGGCATACGCATAATTAAA
CCTTAAAACCTCTTTTACAAACTCAAAAGACATTCAAAACTACTTAAAAA
ATCAAAACATCAGCCATATTTATAAAAGCTCCTAGTCATTAATAGCCATT
TCGTTTAGAAGTGAATCTGTGTTTTTGTTTTTATTAGTTTATCTTTTTTT
GCAATGTCAGCTTTTTCCATAAATTATGCGAGCGCAGAGAAAAATATTGA
AAACCCCGCAAAAATTCTGATATCTCATGACAATTAATATGACATAGAGA
GAAACTTTAATAAACATTGTAAATTTAGTGAAACACACACAAGAACTTTC
TTTCTATAGAAGTGGTACGACTCAATACTTTTTTTGGGACACCCTGTATT
ACTTATCATCATTGTTTTGCAAAAAGCAAAAGGTATATTATTCTGCATAC
CCCGCATTACAAAGATATCTATTATCGAATTATCAAAATCTATCGAAGGC
TTGAAGTATTTAAAAAGTTTAAGGAAGTAGAATAGAACTAGGCTCTTCAA
TAAAATAAAAATATTCTTATACCAATTTTTTACCATTATATATATTAATG
AACCCTTACTCACAGTTAAAACCCCTACATATCCTCTTTAGTAAGGATGC
TTAACTATCCGTTCTCAGATCAACTCCTGGATATTCATAATTGAACAATT
TTTTTAAAGCTGACCAATATCCTCAGTAGAAGGGGGGGGTAACTTTTTCT
AGAAAAGCTCATTTATTATACATTAAAATATCAGTTTGAGCGGTAGAATG
GTACCTTTGCTTGTGGCGCAGTGGCCGGGAAACCATCCATGATCCATCCT
GTTCCTCCTGGTAGATTCCTAAATAAATAGAAGAAGCATTGGAGGTGTGA
CTTTGCTTTTAGAGAGAAGAGAAGAAGAAGAAGAGAAGTGAACCCTCTCA
ATGGGCCCTATCCCTGGATAGATACCTATTCTAGGATAGGGAAATTACCA
CGCTTACCAGACACTGCTAATCTGCACTCGCGACACAACAGAGTTATTGG
CGTACAGATGATGATACACGGGAGGACATACATCTTTGCAGGTGTTGAAC
CAATGAGTATCGTCACCACACCACATGCAATGCCTGGCATACTCCCCATA
ACCTTTTATCAGAGTGATGGTACCCAGTTCCCCTCTTCCCCTTTGGCTTT
AACCAAAACTGGGTGTATTTTGGAACAAGGCACAGCTAATATCTTTCTAC
AAAAACCTAACCATCATTTTAACTATTTTTGACAACCATACTCTACAGAC
ATAAAAGGAACATTTAATTAGAGATTTTATATTTATTAGATTTTATTAGA
TTGTCTTTTGTGACTTATTTTATTGGCTAATTTTTCACTTTTAACGGCCT
TATGTTTAGAAGGAAATGAAAATTTCTGATCCCCTCTTCTTCAATTTTTC
GGAAGGTGTCACCCCCCTCCCCCTTAAGAAAGGGGGGGGGGCGAACTATC
AGAAAGATGTTAGTATCATCATAGATAATGGTCATAGAAATATANCCCCC
CCCTTAAGAAAGGGGGGGGGCGAACTATCAGAAAGATGTTAGTATCATCA
TAGATAATTGTCATAGAAATATATAAAATAAGTATTATGCAGTAAATTGA
CTGCCAATAATTATATCAAACATTTTGCCGAGAATATAATGTTCGTTGTT
TCTTTTTTTATCGAGATATGTTCAAGCAACCACTTGAAATTTCAAAACAA
CACCTTTGATCGTTTGACCTTCTTCCATATCTGTTGCTTTCCTGTATCCA
TCAAAAACTTCAGTCGGTAAAATCTTGATCTTTCCCTCTCTTTCCAATCG
TTCTGCATGTTCCATTTCAGCAATCTTCATATAAATTTGACCAGTGCATG
CTACAACCAACTAATTTGAAAATTCTTCTTTTTCAGGGCTCACTAGTAAG
CAAGTATCAAAATTGAAGAATGCCAATGCCAATTATGTTGGATCAGCAGT
GTTGATGCCATTTTGTTTTGTACAGAATGAGCTTTCAATTCTTTTTATCA
TAAGATCTTCATTTCAACCGTCTCATGCTGGGCAAGTAGGGTACGTATTT
CTATGCAAAGTTTCCTTCTTTTTATCAAGGAAAGGTGCTGAGGTATGTGA
GAATCGTCCCTTTTCTCGCCCTTGAAAGTCTCTCACAAGGGTAGAAAAAC
CACAAAACAGCAATTGAATCCCTGACAGGGTCCCATAATTATGAAAAATC
ATTACTTCCTCGAAGGGTCATAAATTCTCGTAATTTGGACCAAAGCTTAA
AATCTTTAGCTGAAAATTACAAATTAGGCTCTCACAGGGTCGATTTTCGA
ACTTTCGCTCGGGCACATCCACCACTTCGCAAACCTAGTATACCCCCATC
CCGGTAATTCGTCACATTAAATATAGAATAGAATGGGGAATAAAAGATCA
GAGTATTGTTATAAAGTTTTTAGTTGTGTAGCCCGATAACAGATAGCCAT
AATTTTCATTCGAGCACATAAATCTCTGCAACAAATGCATTATATTAGTT
TCAAAAATTGTTTTTGATGCTAGCTATTTTATTTTAAAAGAATTACCTTC
GCTTTTTTTACAGATTTCCTGGAGGAAGGCTAGATGCTGAAGACAGATCA
GTAGAGGATGCTGTATTGCGAGAAACGTTCGAAGAAATTGGAATCCCTTC
TCATGAGATTGAAATATGGAACAAAGTAGTCTCCGAAAAAAAGGTCTGTT
AATATTTTTATGATGTTTTTTGGGGCACTTCAAAACAAAATGAATAGCCA
CACGTTGTTTTCATAAACAACTCTAGTGGGGTCGTTTAGCATAATTTAAA
GGAAAAAAATAATATCTAGTTGAAACTTTCTCCAGACATTCTCTATCAGG
AGCTTATGTCTAAGGAAAAAAAAACCCCTAAAATCCCACTGGTGGAACAT
CCCTTTTTTGGGCAATTTTTTTCCCCAGGCGCAAAACCCTAAGGGCAAAA
CTTTTTGAAAATTCTAAACTCATTTTTAGACCATATCATGTATACCATTC
GAAAGCTCTCAAAAATATATCGAAGACTTTCAAACGGTTTTAGCCGATTT
CCCTTCTTAACTCGAGATATTTCATGTGCAAGTTCCACTTTTCGCCATAT
TTTGGTCTAAAACTGACCATAAATTGCATCTTCTGCGTGAATTAAACATG
TATTGTATGTTTTTATTTTCTCTTTGTTTTTAGATTTCCAACTCGCCTAT
AGGAATCGTCTTTGGTTTTGTCAAAGATTTCAATCATGAAAAGCTCAACA
TTTGTGAACGAGAGGTAAAAGTTTTTTCTGCTTCACGATTCGCGTTCTCA
CTTGATTCATTCATATTTTGAATATTGATACGTTGACTCCAGTGATTCTT
TTAAGGTAACTATTTCTGAAAGTCATCCTAAAAAAATGTTTAAACGGTCT
TTTGAAGACTTAATATCTTTTTGTTAGTTTTGTTTGTTTGTTTGTTTGTT
ATTTATCGTTGAAACTAAGAAAAAAATAGCTACTAGGTTGATACAAGTCA
ACCTATTCACAATTTATTTAGTTCTTAAATAAAGCCATGGATATAACGTT
GATTTCCAATGCTTATTTTTGGACCTACCTCCGGGTACCCCGGTGGGGGT
CCTTTAAATTAACCCATGTCCGTTCGTTCGTCCGTTCGTTCGTCTGTTGC
CAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTCTGATTTTTTGCACAAT
GATGCAAAATGGCAATGCCCAAAATTTTTCCGGCCGAAAATACTGGAAAT
ATCCCGGAAAAACTGTTTTTTTGGCACTTTCTCGAGATTTTATCATTAGT
TTTTTCTGATTTTTGTTCAAAGATGCGTATTAACAATGCCCAAAACATGG
CCGAGTCCATTTTTTGAGAAAAAAAATTTTCCGGCCCAAAATATGCCGGA
AATCGCCGTTTTTCTGGATTTTCATTGGAATTTTTCCTTACAATTGGTTG
TTTTTTCATTCAAAAACATTATTAATAGCAATGCCCACCATCAAGCATTT
TTCAATTTTCAATGAAATTGATTTTTGAAGCTGGAACTATTCAAAAATCG
CTGGAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCGA
GCTGTACTTTATATTTTTTTATGAAATTTTGCATACTGATGCAAAATGAC
AATAGCTAAAATGTGACGGAGCCAGATTTGCGAAAAACATTTTTTTCCGG
CTGAAAATGCCGCTTTTCTGGATTTTCATTATACTTTTTGCTTATAATTG
GTTGTTTTTTCATTCAAAACATTATTAATAGCAATGCCCACCACCATCAA
GTATGTTCCAATTTTCAATTAAATTGATTTTTGAAGCCGGAACTATTCAA
AAATGGCCGGAAGAGCCTATTTTCGCCGGAAAGACAGTATTTCTTGAATT
TCTCGAGCTGTACTTTACACTTTTTATGAAATTTTGCACATGGATGCAAA
ATGACAATACCTTAAATGTGACGGAGTCTAATTTTCGAAAAACATTATTT
TCTGGCCGAAAATGCCGGAAATATGCCGGAGAAACCGTTTTTTTTGACAT
TTTATCGAATTTTCATCCTTATTTTTCTCTGATTTTTTTGCAGAATGATG
CGTATTCGCAATGCTCAAAACATGACCGAGTTCGATTTTTGAGAAATGTC
TTTTTCCGGCCAAAAAAAGCCGGAAATTTCCGTTTTTGCAGATTTTCATT
GGATTTTTTCGTTTCATGTCTTTGTTTTTTTCAAANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAATGAAACTGATTTTGGTACAGG
AACTTTCTAAAAATTGCCAGAACAGCCGAGAATCGCCGGATTCCATGAAT
TTCTCGTATTATTCTGCATTTTCATACTATTGTTCTCATTTTTCAATTGT
TTTATTACATCAATCTTCAGGTAGGTCCATTCAGCATGTAGCTCGTTTTA
CTTTAAATTCTTCAAGATCATTAAGATGTCGAAGTTCTTGGACAGTGGTA
TTTCTCTTTCAATGTTGTCAAATAATTTGATTTACTGCCTGGGTAGGCCT
GAAAGTGAAGCTTATATTGATGAAATGAGGTATTAATTCACTACTACATA
CTAATAATTTATACTTATTTAAAACCTTACTTGCTTTTGCAGGTGCACGA
TGTCTTTACAGTCCCTATCAAGGATTTATTGGACCCTTCAAAACATGGAT
ACACTAAATTTCGCTGGGGAAATCAAATGCCAGTATTTGTTAACCAGCAC
CGAAATGTATGGGGCTTGACGGCCATGTTCACCAATATTTTCCTAAGGTC
GCTTTTCCCTGAGATACATCGTTTATCAACGTTTAGATCACTTCAGAACA
TGGAAGAAACTCATAGGTAGCAGAGGCAAGAGACTTATTCTCGAAATTGT
TGACAATATTTTTCTGTTTTTTTGTGGATGTTTCGTTCTGGATTTCCAGA
ATTTATGGCCCTTCGGGAAACTTTTTCTAAGACTGCATTTTTATTTGCGC
TTTGTGACTCGTAGATAAACTTTCGTTTTCGAACGTCTGAATTAAGGGGG
AAAATATCTATCAAATACCTTTAGATCATCTTAATTCCTCTCTTGCGCTT
CAATCATCACCGTTCTAATCAAAAAGAACATTCCAAACTTGATAAGAGTG
ACATTAAGCCTTTTACAGAAATCAAATACAGTTGCTCTTTAATTCGTCCT
TCAAGGGGAATTGAATTTTCATCGAATAAGGGAGCTTATCGAATAATAGA
GCGAGAAATTCTTGATGACTGGGACTTCAAATTTTATCAAATAAGGGAAG
TTATCGAGTAGTAGAATGTCGAATTAGAGAGCATCAACTGTATTCTATTT
TTTAAATTTTACTGTAAATTTTTGGAATTTTTATAATTTATTGTTTTTGT
TTGTCAAAGCATGTAAATTGTGACTAACATACTAGCGTAGATTAAATAAT
TGTTTGAAAACTTTTATATCTGTTTCGACCGAATAAAAGTTAATTCATGC
TATCTGTAAATTGATCTTTTAGGAGAAAGGGAATCAATAATGGGATATTT
TGATAATCTTAGATGATTGAAGTGAATGACAAATCATATCATCTACGTTC
GATCCCTTAAAGTGTTTATTCGAGGAGTGTTTCTTGAGTTTCCTTAACAC
TTAGTAACCCTCCTCTTTTTGTCACAATTCTATGAGAGAAAACGAAATTT
TAAGTATGGCTTTTCTGTGTTTTTAACAAGCTTTGTGCTATTGGTAGTAG
ATTTATTTTTTGAGAGGTGTTTTATATGAAAAGTTTAAGCAAACAAGATT
TAGCTTAATCAACATCATCTTGCTACCTGTCTACCGAAGAGGAGGTTTTT
TGAATGCCATTCAGACGACTTTGTTGTTATTGTACTGGTATTTTATATGT
TTGAGTTAGCAATGTTTTGATGTGAAAGATACACTACATATTGGTTGAGA
AGTTCATGAGCTCTGTGCTTTGTTTCTCACTTTGTTTCAGAGAGTCTTAG
CAGGGGATTTGACATATTCTTTCAAGCAAACATTATTATTTTCATTCGTG
GCAAATGCTCCCATGCAGAATCATTGATCAACGGCAGCAGCGCTTTGCGA
TATTTTAAGCGTCATCAATTTACCAAGAGATTGCTTTCGGAGAGTTGTCG
AAATACGTTTTGTTCAGATTTTGGGAAAGATTGAGAATTTAACTGCAGAA
TTATGTCTCGCTTATTCATATTCTTCGTGCTTGTACCACTTGTATTTTGC
GTGGACAACAAAGACAAATCGAGGTACATAAAACGTGTGAAACCAAGAAT
GAGCATGTTAATCAAACCGAACGATACCCGATGGACCATCCAAGGATATC
AATGTGATGGAAGAGATTGTGAGAAAACGTGCGATGCAGAAGGGATATGT
ACTTCTTTTAAATGTGACTGCCCTGGGTCTCTTGCCTCTGGGTATATTGG
AAACCCACTGCCGACAAATTGTGAAGTTTCGACTGAACTTTCGTGCAGTA
ATGTTTGTTTCCGTGGTTTTTGTAGACAAATTTGTAAAGAAGTGATTGTT
AAAGATTGTTTCAACATTAATGGTTAACTTTTATAACGCTACCAACTTTT
TATTTCTACACCCCTGTCTCACAGCCTCGGTGGAACTTTTTT

Coding sequence (CDS) from alignment at scaffold_418:158477..167368-

>TCONS_00064504 ID=TCONS_00064504|Name=TCONS_00064504|organism=Clytia hemisphaerica|type=CDS|length=3825bp|location=Sequence derived from alignment at scaffold_418:158477..167368- (Clytia hemisphaerica)
GTGCACGATGTCTTTACAGTCCCTATCAAGGATTTATTGGACCCTTCAAA
ACATGGATACACTAAATTTCGCTGGGGAAATCAAATGCCAGTATTTGTTA
ACCAGCACCGAAATGTATGGGGCTTGACGGCCATGTTCACCAATATTTTC
CTAAGGTCGCTTTTCCCTGAGATACATCGTTTATCAACGTTTAGATCACT
TCAGAACATGGAAGAAACTCATAGGTAGATTTCCAACTCGCCTATAGGAA
TCGTCTTTGGTTTTGTCAAAGATTTCAATCATGAAAAGCTCAACATTTGT
GAACGAGAGATTTCCTGGAGGAAGGCTAGATGCTGAAGACAGATCAGTAG
AGGATGCTGTATTGCGAGAAACGTTCGAAGAAATTGGAATCCCTTCTCAT
GAGATTGAAATATGGAACAAAGTAGTCTCCGAAAAAAAGGGCTCACTAGT
AAGCAAGTATCAAAATTGAAGAATGCCAATGCCAATTATGTTGGATCAGC
AGTGTTGATGCCATTTTGTTTTGTACAGAATGAGCTTTCAATTCTTTTTA
TCATAAGATCTTCATTTCAACCGTCTCATGCTGGGCAAGTAGGATGAATA
CAAGATTTACTCTAAAGAACTTCACTCAGATCTTCAAAAGATTTTGTAGT
AGAAGTAGAAGCTGCCCAAATCAGTCTGCTGTCACAGTCACAGAAAGTGA
GATCCAAAAAAGACTAATTGACCCTGTTGGTCGAAAACAAACGTTCCAAA
ATCTTCATGAAAAAGGTGCACGATGTCTTTACAGTCCCTATCAAGGATTT
ATTGGACCCTTCAAAACATGGATACACTAAATTTCGCTGGGGAAATCAAA
TGCCAGTATTTGTTAACCAGCACCGAAATGTATGGGGCTTGACGGCCATG
TTCACCAATATTTTCCTAAGGTCGCTTTTCCCTGAGATACATCGTTTATC
AACGTTTAGATCACTTCAGAACATGGAAGAAACTCATAGGTAGATTTCCA
ACTCGCCTATAGGAATCGTCTTTGGTTTTGTCAAAGATTTCAATCATGAA
AAGCTCAACATTTGTGAACGAGAGATTTCCTGGAGGAAGGCTAGATGCTG
AAGACAGATCAGTAGAGGATGCTGTATTGCGAGAAACGTTCGAAGAAATT
GGAATCCCTTCTCATGAGATTGAAATATGGAACAAAGTAGTCTCCGAAAA
AAAGGGCTCACTAGTAAGCAAGTATCAAAATTGAAGAATGCCAATGCCAA
TTATGTTGGATCAGCAGTGTTGATGCCATTTTGTTTTGTACAGAATGAGC
TTTCAATTCTTTTTATCATAAGATCTTCATTTCAACCGTCTCATGCTGGG
CAAGTAGGATGAATACAAGATTTACTCTAAAGAACTTCACTCAGATCTTC
AAAAGATTTTGTAGTAGAAGTAGAAGCTGCCCAAATCAGTCTGCTGTCAC
AGTCACAGAAAGTGAGATCCAAAAAAGACTAATTGACCCTGTTGGTCGAA
AACAAACGTTCCAAAATCTTCATGAAAAAGGTGCACGATGTCTTTACAGT
CCCTATCAAGGATTTATTGGACCCTTCAAAACATGGATACACTAAATTTC
GCTGGGGAAATCAAATGCCAGTATTTGTTAACCAGCACCGAAATGTATGG
GGCTTGACGGCCATGTTCACCAATATTTTCCTAAGGTCGCTTTTCCCTGA
GATACATCGTTTATCAACGTTTAGATCACTTCAGAACATGGAAGAAACTC
ATAGGTAGATTTCCAACTCGCCTATAGGAATCGTCTTTGGTTTTGTCAAA
GATTTCAATCATGAAAAGCTCAACATTTGTGAACGAGAGATTTCCTGGAG
GAAGGCTAGATGCTGAAGACAGATCAGTAGAGGATGCTGTATTGCGAGAA
ACGTTCGAAGAAATTGGAATCCCTTCTCATGAGATTGAAATATGGAACAA
AGTAGTCTCCGAAAAAAAGGGCTCACTAGTAAGCAAGTATCAAAATTGAA
GAATGCCAATGCCAATTATGTTGGATCAGCAGTGTTGATGCCATTTTGTT
TTGTACAGAATGAGCTTTCAATTCTTTTTATCATAAGATCTTCATTTCAA
CCGTCTCATGCTGGGCAAGTAGGATGAATACAAGATTTACTCTAAAGAAC
TTCACTCAGATCTTCAAAAGATTTTGTAGTAGAAGTAGAAGCTGCCCAAA
TCAGTCTGCTGTCACAGTCACAGAAAGTGAGATCCAAAAAAGACTAATTG
ACCCTGTTGGTCGAAAACAAACGTTCCAAAATCTTCATGAAAAAGGTGCA
CGATGTCTTTACAGTCCCTATCAAGGATTTATTGGACCCTTCAAAACATG
GATACACTAAATTTCGCTGGGGAAATCAAATGCCAGTATTTGTTAACCAG
CACCGAAATGTATGGGGCTTGACGGCCATGTTCACCAATATTTTCCTAAG
GTCGCTTTTCCCTGAGATACATCGTTTATCAACGTTTAGATCACTTCAGA
ACATGGAAGAAACTCATAGGTAGATTTCCAACTCGCCTATAGGAATCGTC
TTTGGTTTTGTCAAAGATTTCAATCATGAAAAGCTCAACATTTGTGAACG
AGAGATTTCCTGGAGGAAGGCTAGATGCTGAAGACAGATCAGTAGAGGAT
GCTGTATTGCGAGAAACGTTCGAAGAAATTGGAATCCCTTCTCATGAGAT
TGAAATATGGAACAAAGTAGTCTCCGAAAAAAAGGGCTCACTAGTAAGCA
AGTATCAAAATTGAAGAATGCCAATGCCAATTATGTTGGATCAGCAGTGT
TGATGCCATTTTGTTTTGTACAGAATGAGCTTTCAATTCTTTTTATCATA
AGATCTTCATTTCAACCGTCTCATGCTGGGCAAGTAGGATGAATACAAGA
TTTACTCTAAAGAACTTCACTCAGATCTTCAAAAGATTTTGTAGTAGAAG
TAGAAGCTGCCCAAATCAGTCTGCTGTCACAGTCACAGAAAGTGAGATCC
AAAAAAGACTAATTGACCCTGTTGGTCGAAAACAAACGTTCCAAAATCTT
CATGAAAAAGGTGCACGATGTCTTTACAGTCCCTATCAAGGATTTATTGG
ACCCTTCAAAACATGGATACACTAAATTTCGCTGGGGAAATCAAATGCCA
GTATTTGTTAACCAGCACCGAAATGTATGGGGCTTGACGGCCATGTTCAC
CAATATTTTCCTAAGGTCGCTTTTCCCTGAGATACATCGTTTATCAACGT
TTAGATCACTTCAGAACATGGAAGAAACTCATAGGTAGATTTCCAACTCG
CCTATAGGAATCGTCTTTGGTTTTGTCAAAGATTTCAATCATGAAAAGCT
CAACATTTGTGAACGAGAGATTTCCTGGAGGAAGGCTAGATGCTGAAGAC
AGATCAGTAGAGGATGCTGTATTGCGAGAAACGTTCGAAGAAATTGGAAT
CCCTTCTCATGAGATTGAAATATGGAACAAAGTAGTCTCCGAAAAAAAGG
GCTCACTAGTAAGCAAGTATCAAAATTGAAGAATGCCAATGCCAATTATG
TTGGATCAGCAGTGTTGATGCCATTTTGTTTTGTACAGAATGAGCTTTCA
ATTCTTTTTATCATAAGATCTTCATTTCAACCGTCTCATGCTGGGCAAGT
AGGATGAATACAAGATTTACTCTAAAGAACTTCACTCAGATCTTCAAAAG
ATTTTGTAGTAGAAGTAGAAGCTGCCCAAATCAGTCTGCTGTCACAGTCA
CAGAAAGTGAGATCCAAAAAAGACTAATTGACCCTGTTGGTCGAAAACAA
ACGTTCCAAAATCTTCATGAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040455XLOC_040455Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064504-exon-scaffold_418-1575043694:167047..167368TCONS_00064504-exon-scaffold_418-1575043694:167047..167368Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1575043694:163729..163882TCONS_00064504-exon-scaffold_418-1575043694:163729..163882Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1575043694:163076..163205TCONS_00064504-exon-scaffold_418-1575043694:163076..163205Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1575043694:162505..162585TCONS_00064504-exon-scaffold_418-1575043694:162505..162585Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1575043694:158477..160476TCONS_00064504-exon-scaffold_418-1575043694:158477..160476Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1510915933:167047..167368TCONS_00064504-exon-scaffold_418-1510915933:167047..167368Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1510915933:163729..163882TCONS_00064504-exon-scaffold_418-1510915933:163729..163882Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1510915933:163076..163205TCONS_00064504-exon-scaffold_418-1510915933:163076..163205Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1510915933:162505..162585TCONS_00064504-exon-scaffold_418-1510915933:162505..162585Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1510915933:158477..160476TCONS_00064504-exon-scaffold_418-1510915933:158477..160476Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1491911889:167047..167368TCONS_00064504-exon-scaffold_418-1491911889:167047..167368Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1491911889:163729..163882TCONS_00064504-exon-scaffold_418-1491911889:163729..163882Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1491911889:163076..163205TCONS_00064504-exon-scaffold_418-1491911889:163076..163205Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1491911889:162505..162585TCONS_00064504-exon-scaffold_418-1491911889:162505..162585Clytia hemisphaericaexon
TCONS_00064504-exon-scaffold_418-1491911889:158477..160476TCONS_00064504-exon-scaffold_418-1491911889:158477..160476Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064504-proteinTCONS_00064504-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:158477..167368 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.47352	6.5479	7.83221	7.48568	3.06988	3.03614	15.7011	17.732	12.5835	12.0898	12.692	13.3301	5.4941	4.78605	3.56938	3.62064	7.35148	7.35878	3.25758	3.87001	12.0292	11.5863	8.19143	8.40235	11.5133	12.5801	7.16552	5.21688	7.26212	5.58564
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase_dom-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
Blast
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BLAST of TCONS_00064504 vs. Swiss-Prot (Human)
Match: NUDT8 (Nucleoside diphosphate-linked moiety X motif 8 OS=Homo sapiens GN=NUDT8 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.885e-23
Identity = 60/186 (32.26%), Postives = 92/186 (49.46%), Query Frame = 1 
Query:  325 LTSKQVSKLKNANANYVGSAVLMPFCFVQNELSILFIIRSS-FQPSHAGQVGFPGGRLDAEDRSVEDAVLRETFEEIGIPSHEIEIWNKVVSEKKISNSPIGIVFGFVKDFNHEKLNICEREVHDVFTVPIKDLLDPSKHGYTKFRWGNQ----MPVFVNQHRNVWGLTAMFTNIFLRSLFPEIHR 867
            L +   ++L+   A+   +AVL+P C V+   ++L+ +RSS     H G V FPGG+ D  D+ V    LRET EE+G+   E  +W  +        + +  V   V   + + L     EV +VF +P+  LL     GYT F  G      +PVF++    VWGLTA+ T   L+ L P  ++
Sbjct:   17 LLAGATARLRARPAS---AAVLVPLCSVRGVPALLYTLRSSRLTGRHKGDVSFPGGKCDPADQDVVHTALRETREELGLAVPEEHVWGLLRPVYDPQKATVVPVLAGVGPLDPQSLRPNSEEVDEVFALPLAHLLQTQNQGYTHFCRGGHFRYTLPVFLHGPHRVWGLTAVITEFALQLLAPGTYQ 199
The following BLAST results are available for this feature:
BLAST of TCONS_00064504 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NUDT82.885e-2332.26Nucleoside diphosphate-linked moiety X motif 8 OS=... [more]
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