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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064495 ID=TCONS_00064495|Name=TCONS_00064495|organism=Clytia hemisphaerica|type=transcript|length=507bp
GAAAGGGGAGGCATCTCATTTCGGTTCAGACTTTCTGCTTGCAACGTTGA
GTGAAGAGAAAAAATACAGATTTCAAAATGGTCAAGTACACATTGAACTA
CTTTGATACAGCTGGTCGTGGTGAAGCAATCAGGTTAATGTTTCATGCCG
CTGGAGTTGACTTCAATGATAACAGAATGTCTGGAGAGGAGTGGGCCAAA
AATAAAACAGATGCCAAAAGATTTCCACTTCACCAAATGCCAACTTTGGA
AGTTGATGATAACGTCATCTGTCAATCAAGTGCTATTGTTCGATTCGTTG
CTAGGGAACTTGGCTTCTATGGCAGTAGTTCGTTGGAACAAGCTGTGATC
GATCAAGTTTGTGAGACGTTCAGTGACATTGGAGAACAGttgatcaaaat
tatatttggaGGGAATGACGAGGAAGCAAAGAAAACAAAATTGCAAGAAT
TTTACGCCTCTGACAAATACAAGTTGTTGATGGGATTCATTTCAAAAACC
TTGAAGC Run BLAST on NCBI transcript from alignment at scaffold_418:151833..152924+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064495 ID=TCONS_00064495|Name=TCONS_00064495|organism=Clytia hemisphaerica|type=transcript|length=1092bp|location=Sequence derived from alignment at scaffold_418:151833..152924+ (Clytia hemisphaerica)
GAAAGGGGAGGCATCTCATTTCGGTTCAGACTTTCTGCTTGCAACGTTGA
GTGAAGAGAAAAAATACAGATTTCAAAATGGTCAAGTACACATTGAACTA
CTTTGATACAGCTGGTCGTGGTGAAGCAATCAGGTTAATGTTTCATGCCG
CTGGAGTTGACTTCAATGATAACAGAATGTCTGGAGAGGAGTGGGCCAAA
AATAAAACAGATGGTATGTTCTTATCTTTTACGTCTTTCTGCTTTTGTAA
ATTAGCACTTACACATCCTGTCTTGTTGACCTAGCCAGAAATTAATCTGG
CTATTTCGTATTTGTAAGTCTAGTTGTTCTAAGTTATTCGGATCTACTTT
TGCAATCTATCGCAAGAAATAAGTTCATTCTCATTGTTTGGTTCGCATCT
TTGACTTGACTTGacatatttgtttattttccttTTAGCCAAAAGATTTC
CACTTCACCAAATGCCAACTTTGGAAGTTGATGATAACGTCATCTGTCAA
TCAAGTGCTATTGTTCGATTCGTTGCTAGGGAACTTGGCTTCTATGGCAG
TAGTTCGTTGGAACAAGCTGTGATCGATCAAGTTTGTGAGACGTTCAGTG
ACATTGGAGAACAGttgatcaaaattatatttggaGGGAATGACGAGGAA
GCAAAGGTACCAGAAATTTTTCCTTATTCTCagcttcagttgagctacaa
tctgacaatgtctgtctgtgtgtggctgtctgtctgtctgtatgtctgtc
acaaaaactttagggcagcctggagacttcaaaaattgttcgatttggct
gaaattttgcacacttgttctttgggtgaatatctggggttctacaattg
ggcctatgaatagtttgatggcactgaagttgagcccagtgcgttgcgca
cgttcgactattttgaAATCTATTGCAAAACGTTCAGCCAActctcaaaa
acatattttcacAGCTTGTAATttgtcaacttgaaaaatatagcttttat
TGTTCATTCTTTTAAGAAAACAAAATTGCAAGAATTTTACGCCTCTGACA
AATACAAGTTGTTGATGGGATTCATTTCAAAAACCTTGAAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064495-exon-scaffold_418-1491911889:151833..152045 | TCONS_00064495-exon-scaffold_418-1491911889:151833..152045 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1510915933:151833..152045 | TCONS_00064495-exon-scaffold_418-1510915933:151833..152045 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1575043694:151833..152045 | TCONS_00064495-exon-scaffold_418-1575043694:151833..152045 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1491911889:152271..152488 | TCONS_00064495-exon-scaffold_418-1491911889:152271..152488 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1510915933:152271..152488 | TCONS_00064495-exon-scaffold_418-1510915933:152271..152488 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1575043694:152271..152488 | TCONS_00064495-exon-scaffold_418-1575043694:152271..152488 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1491911889:152849..152924 | TCONS_00064495-exon-scaffold_418-1491911889:152849..152924 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1510915933:152849..152924 | TCONS_00064495-exon-scaffold_418-1510915933:152849..152924 | Clytia hemisphaerica | exon |
| TCONS_00064495-exon-scaffold_418-1575043694:152849..152924 | TCONS_00064495-exon-scaffold_418-1575043694:152849..152924 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_418 | supercontig | scaffold_418:151833..152924 + |
Blast
The following BLAST results are available for this feature:
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