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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064484 ID=TCONS_00064484|Name=TCONS_00064484|organism=Clytia hemisphaerica|type=transcript|length=534bp
GTTGAAACTTTGTTGTCTGCCAGCTGGGTTAAAATTACAGCCGCAGAGGT
AACGTAACTAATTCAAACTGATATTTCCTTCCTTTTTCAGTTTGTCCGTA
TCACAACCCGTGTTCCCGAATCCGATGCCGTTACGGGTACAGATGTGTAC
CAAATTTCTCAAGATGTGCTTACTCATGCCAACCTAAAGTTTGCCCAAAC
AGACAATGTGTCCAAGCTGCTTGTGATGCAAAACCTTGTAAAAAAGGTCA
ACGGTGTATTGAGATATGCAAGAACTCATGTGTACACGCCTGCGAAATCA
GCAGATataCTTACGGCGGTTGATGAAAACATTTTGATGGATTGAAACTA
ATTCCCTGATTGTGTAAACTAACTCAAATCTTTTGCTGTGGATCATGCAG
AAGATGAAAATCAGtatttggaaaatttattttcaacttttttaaccatt
gttatattcttatttttagtACTTTTTATTACTTCTTCGAACATTTTAAA
ATTCTGAAATAGATGATGTCAATTTAATgaatat Run BLAST on NCBI transcript from alignment at scaffold_418:94196..96146+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064484 ID=TCONS_00064484|Name=TCONS_00064484|organism=Clytia hemisphaerica|type=transcript|length=1951bp|location=Sequence derived from alignment at scaffold_418:94196..96146+ (Clytia hemisphaerica)
GTTGAAACTTTGTTGTCTGCCAGCTGGGTTAAAATTACAGCCGCAGAGGT
AACGTAACTAATTCAAACTGATATTTCCTTCCTTTTTCAGTTTGTCCGTA
TCACAACCCGTGTTCCCGAATCCGATGCCGTTACGGGTACAGATGTGTAC
CAAATTTCTCAAGATGTGCTTACTCATGCCAACCTAAAGGTAAGTTCTAT
TAACAAAACACTGGTCAATCTCGTCGTACCCAGAGCTATTTGTACCACTT
GGTTTATTTTACTGATGGGCGTGATAAATCGCGCAGATAGTGCTATCAAA
ATCATAAGAAAGACAACAAAGGGAATGGGTTCTAGTTTGAGCACTGGTGC
ATTCAATTTCTTTCAACAAAGATGGTCGGGAAAAATACCATAAATAATTA
TAATTTCCATATTTTGATATTGGAGTCGCTCAAAAAGCCATAACAAATTT
GACCCAAACTGGGCTAGCAAACATAATAATGGGTGGAATCTTTAaagtcc
cttcagttaacaatgcctcatAAACCTAACTTCACtttaaaatttccata
attcgagcaaaattacattttcaggtgcgtgttcgagttatggaaactcg
ACTGTTCCTTTTATATTTTAAATGCACGCATATAGTTCAAAAGCCTCCAT
CCCAGGTCAAATCTAACAATAAATACATCTTTTTGACCgcagtcgcgcgg
tcaggcgcatgccacttttatcccactaaactcgatccaatccttttttg
acacatttttctattgtctataggtgcgaaaaaaggactgggacggtttt
agtgggataaagcggacaaaaaatacccgcgcggcaattggcggctacgg
ttgaaaaggtgtatgaAAAACGAGATCATATCTCATAACCCTACTCCCGC
CTTTCCTTTTAGTTTGCCCAAACAGACAATGTGTCCAAGCTGCTTGTGAT
GCAAAACCTTGTAAAAAAGGTCAACGGTGTATTGAGATATGCAAGAACTC
ATGTGTACACGCCTGCGAAATCAGCAGATGTGAGTTattctttaaccttt
ctctCTATGAGGGAACTACTTTTTGAGATATACTCTTCTCAGTCTTAAca
tagttcttataaaagacaCTGATCTGGAAGCCTATTGTTATAaatttttg
ttaactttttccttTGTTGATAACGATTATAAAAGTCGATTTgttcagtt
tttgatcacgttccCAAATACTGTACTACTACTCTTGGGATTGGTTGAAA
AGTTAATCACATGAtaaaaaagtgagcaaaacagaataatttctcaacgc
aagttcaagtttgaaacaatagaaagaaacaaaaggcttccagaccggtg
ttttttttatacggactatggtctCAGCCGCGTCCTTCAGTAAAAATATT
CGTTTGAGTTAGCAACGACGACTTTCGATTTGACTGATAaagagtttgtt
tttattactaCTATCGTCTTTTTTTACCTTGAAAGCCCTAGGCATCTAAG
AAGTTTAATATTCTGATAGttgagtcgatattttacgcaAATAGCCCTAA
CACTTTTAGAACATTCTtcaattgttttcacggggtcacGAAAAGCTGGC
TCGGTCATCTATGagctgaacggaacattggaaggagcgggaaTTCTAAT
TCTTTTTTGTAGTTATAACGGCTCAGACAACTCGGCTGTCGCTCcttcta
tatatatatattttttcatttagataCTTACGGCGGTTGATGAAAACATT
TTGATGGATTGAAACTAATTCCCTGATTGTGTAAACTAACTCAAATCTTT
TGCTGTGGATCATGCAGAAGATGAAAATCAGtatttggaaaatttatttt
caacttttttaaccattgttatattcttatttttagtACTTTTTATTACT
TCTTCGAACATTTTAAAATTCTGAAATAGATGATGTCAATTTAATgaata
t
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064484-exon-scaffold_418-1491911889:94196..94384 | TCONS_00064484-exon-scaffold_418-1491911889:94196..94384 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1510915933:94196..94384 | TCONS_00064484-exon-scaffold_418-1510915933:94196..94384 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1575043694:94196..94384 | TCONS_00064484-exon-scaffold_418-1575043694:94196..94384 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1491911889:95108..95224 | TCONS_00064484-exon-scaffold_418-1491911889:95108..95224 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1510915933:95108..95224 | TCONS_00064484-exon-scaffold_418-1510915933:95108..95224 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1575043694:95108..95224 | TCONS_00064484-exon-scaffold_418-1575043694:95108..95224 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1491911889:95919..96146 | TCONS_00064484-exon-scaffold_418-1491911889:95919..96146 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1510915933:95919..96146 | TCONS_00064484-exon-scaffold_418-1510915933:95919..96146 | Clytia hemisphaerica | exon |
| TCONS_00064484-exon-scaffold_418-1575043694:95919..96146 | TCONS_00064484-exon-scaffold_418-1575043694:95919..96146 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_418 | supercontig | scaffold_418:94196..96146 + |
Blast
The following BLAST results are available for this feature:
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