|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064366 ID=TCONS_00064366|Name=TCONS_00064366|organism=Clytia hemisphaerica|type=transcript|length=1987bp TCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCATATTctgct ttcatttttcttttcaccCAGGTGACAAACAGACGATAGAAGGAAAATGG CTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTCTTGTTAACA CCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAA AGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATAAGAGAGAGG GGGAAATACTGGACGATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGA GCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGCCAATCTTTT CGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCGAGTTTGAAA ATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGA TTCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTATTCAAG TTATTTCAAGTTGGAGACGTACCACCACAGCAAGGTGATGGTGATGTTGT TGGATTTCTACGATCATGGTTTTCGCTTCAGTGAATCCGTTCGCAAGAAG ATCGAAGTTGATTCCAAAAACCATTTGGATCATATCCATGATATCCAGAA AGCTTTCTTTCAACATAAAGTGAAATTGTGTTCCGCTTTCGCGAGGAATC GCATCAAAGCGTGCGCTCTCTCCTTGGACGCCATGTTGCCGGCTGAAGTG AAGGAACGTAACGAACATGGCTCGCGTCATTCTTTGTTCACGTGGATCAA CCCTTTTGTGGCTGACGCACATTGTATCATCAATCAGCTGAAGAGCGATG GTTTCGTTTACAAAGAATCTTTAGAAGAATTGAGTGGATCGGAAGATAAC GGACTTTATTTCTCTTATGAAGAAGATGGTGCAAACACTGACTTGTTGGA GTTTCCTGCATGGTGTAAAGATGAAGTGTACAACCATCAATTAGCATTGG ATTCGTCTCTTGTTCCAATGAGTAAACCACGTTACCTGATGACAAAGGCG TGTCGGCGTGCACACGATGAAGTGTGTCGAGTGCAACAGAAATCGCATCA TCACGCTGTTCTCCCGGCAACCGATGGCAAGGAGAATCATGATATGGTGA ACGGTGGTTGTGATGTCGTCCTCACTCATCCTGAAACTGGATCGTTGGCG GCATACTTATGTTCCTTCCTTGGCACCAACAAACGTCTCTTTATCTTTGG TTGTCATGGTGACAAAGCGGTAGAGGtcgagaaaaatttgaaaaatattg gaatatcaAATTATGTTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGG ATCGATGACCGGCTTTCATCCGTTAAACTGATCGTTTGTAACCCACCCTG TTCCAATAGCGGTGTAGTGAACATGGTGGACTTTATCATACAGGAAGGAG CAGACACAGCCAGCAGTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGA GGTCTAGCGGAAGAACAAGCCTCTACCATCAGGATTACTTTCTCTTTCCC AAATGTCCAATCCATTGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAA ATGAGAAATTGGTGCAACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAAT CGTTTCGAGATGTGTGTCGTCTTGGAAGATATGAGAGACATTTTCACCTC TAGCCAAGATGGGGATTTCTTGAGAGTGGAACCTTCGTACAAAATGGATG GTTTCTTTGTCACTTTGTTGAAACGAAAGATCAAGGAGGATTCAGTGAGT GAAGTGATGGAGCGAGCGGCCAAGAAAGGTTTATTAAAGAAATCGAGCGG TAAGAAAGAGAAGAGGAAGGGCGTTCCCAAAGATCAACCGCCCCACGTCG CCAATCGGTTGTCGGTTGTTGATAAGAAGAAGGCGGGGAGAAGCTCACCT AAACCACAAAAGAAACTGGAAAGACGAGACACTGANN Run BLAST on NCBI transcript from alignment at scaffold_412:23438..32156+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064366 ID=TCONS_00064366|Name=TCONS_00064366|organism=Clytia hemisphaerica|type=transcript|length=8719bp|location=Sequence derived from alignment at scaffold_412:23438..32156+ (Clytia hemisphaerica) TCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCATATTctgct
ttcatttttcttttcaccCAGGTGACAAACAGACGATAGAAGGAAAATGG
CTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTCTTGTTAACA
CCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAA
AGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATAAGAGAGAGG
GGGAAATACTGGACGATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGA
GCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGCCAATCTTTT
CGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCGAGTTTGAAA
ATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGA
TGTAAGTGACTTTCTCCTCTTTTGAGTTTTATGAGTTTAGTTAACAGTTG
ATGCCCGCTTTCCAAGGTAAATCAAATTTATACCAAATACTGGAACTTAT
CAAATAATGAATAGTCCGCCTGTTCCGGTAAAAACGAGgtaaaaatctaa
tttaaaaatcGAGAATATAAATTTCAGTGAGACTCTTGAACGCTAaccaa
aataataatattgaaggCCTCGATGAAGCCTAACTTGTTTGCAAAATATC
TCCGAATTTTATCTgttctgaaaatcaaattttaatcaaatttctcgatt
tagaaaatcaaaagatttgaaaaatctagTTTGCGAGCTCCGTTCTTTAG
GTCTTCATATTTTAACCCGCTGAAATGGAATAAGAGAGCGAAAAACCTTT
GATTTTAAATCTAAAACGTGAGGTTATCATATTCCGGTATAGAATGTCGA
AATGTATCGGTTGTGAGGTTTTCTCTCCAATAAATTTGAAAGTTGGCTTC
CATTCATTGAGAACGGAAGTTTGTCGATTGTAGGACGTGGAATTAGTAAG
ACTTTCAACGTTaatattcattctttttttcttgcgtTTACCTTATAGTC
GAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTATTCAAGTTA
TTTCAAGGTACGTATTTTGATACTGTTATCACTGCAGGATTTCACTTTAT
TTACCTTTAGGGTGTTTTCAAGCTCGTGTCctatttttgcttggttagcg
TCTGTGAAAATGAAAGCTCACTTAAAATATGTGAACACCCTTTTtctgaa
ttcttttcaaaaaaaattttaagccaaagtggaagaaaagttattggatt
tcattttggtaaaatcgcgatcttaaaatcttgcTTTTGGTCCAGAGTTA
taacaatttaaattttaaaacagaGTTTGCTTTATGAATTATGTTACTCa
ttaattgtctctttcggaaagaACAAAGAGAAAAGACAAGGTCCAGCTTA
CGTTTATTCTCACATCTATGGAATAGTAACATTTtgacacattttgctga
ttaaTCAATTAAACAGCAATTGTCTcgctaaaaatttcaaatcgatgtag
agaaaaatgaaattttactataccatactacttttaacgaagttaaagtg
tATGAGTGACTACTAGCTATCGACTccattcttttttataagattccCGA
AAGGTCAAACTTAAAAAGCGCATTTGAATTAaccttttggacctaccccg
gaggtcctttaatcgttcgttcgttcgttcgtctgttaccagcttttctc
gcgATTTTTTGCATAGAGATGCAAATCGACAGTACCCAAAaggtgacgaa
gcccgatttttgtaaaaaacttttttgggcaaatttagggccgtaaaaat
cagattttcttaattggggaaattcccttttatcatttttatggaAAATG
AGCATTCCTCGCGACTGCCTTGGTATTTTAcctgattttttgtaaaattg
taaattttaaaatctgatcgagcccgattttcgaaacaataattatttgg
gcaaatttgtccaaaaagtGTCTAAAAATAGGATCATTGCATGAATGATA
ATGggcaaagttctttaaaaagtggCTGAATCAGTTTTTTCGGATAActt
tttttggccgtaaaaatttATTaatcttatttggggaaatttccctttgt
catttttagggaaatgagcatttctcgcaACGTCGCAACTGCCTTGGTAT
TTTGTCTGATTTTTTggacaatgatgtaaaatggtaacgtttaagggctc
tgaccatagtgaatttttaatatttgccagtggcaaatttttttcattgc
aattcttaaattttcagatttcaagGATAATTGTACGTgacgtacaaaat
ataaatttctacttgatgtagcccacaagacttgacgaagaagaaaattt
ttgcgaagaagagtatttcaactttgaagaacttattttcggcgaagaaa
aaacaatttttcatcccaatttttcatagaaaaacagccataacttttga
tacattatttagaaaatttttccgaaaaatttaaaacagttcaattcttt
gcggacagtatgaaaaaacttcgaaacaaaaaagttaattacccattaaa
actttttataaaagaaggtaatgcaacatattactaacgtctttttaaag
ttcatagcgtcattttcgcaattaaattcttaattactcttaggggattt
gattaaaaagcaatttaaaaaggcaattctttgttaaagtgttaaagaag
ctaaaacataacttttatgttcaaatactaaagtCATAttttcgactatg
gtcagagcccttaaaatctgatggagcccgattttcaaaagaaaaatttt
aggcaaatttgggtcGAATTCAGATTTGTAGAAGTTGCTTCATTCAATTT
TATCTTTAATGAGAAAGAGTTATGAAAGAAAGGATCGTTTTTGTTTACTC
CTTGGGGCTACTTAGCTCTAAAATATCGGAAAGCCGACGTGAAACAAGTT
GCATCATGTTTTCAAGTTTACGCATCTCTATGCTATGCTGTTATCTTTTC
CATTTCGTTCGAACATTTTCATTTAACACGTTTCCGACTACCtatatcag
gtaggtccattcagcacgttgcttgttttcaatatttttacaaagatttt
atcAAGATTTAACGAGTTAAAGTCAAtgtaaagaaaaatctttttagttc
aatctattgaatttttaaaatggtGTCGTTAAAAATTTTGAGTAGAAACT
CTTCCGCAATATGACATATCAAAGGCCTTCAGAACATAGTACCGAAATTA
TTTTTCCAGAATTTAAAAGCTATGGGCGACTTCACCTTCTTTGAAGTAGG
CAatgttgaaattttaaattttaattactGGCTTTCAGAAATACATATTT
TGATGtacaaaaatttgttgttctaaagatatggcCAAGGAAAGAGAATT
TGTCATAAAGGGTGTCCACATACCTTAACACATCCCgtaagcatagtata
agaacgccgcggctggaatgataacatctgaacttCTGTTGATTGAAGTT
AGATCGCCGCCAAAATTCGATCCTTCAAGTCGTCCCGACGTACTAgaagt
cgtcccgtcgcactAGAAGTCCGCAGGTCGCATTAGAAGTCTGCAAGTCG
GAATCTTTTGGAAGTCGAAACATTCCAAAGTTTAAGTCGAGTCGTTGCTT
CAGAAGTTGACTCGTCGCAAATTTCGGCAGTCGACTCATCCCAAAAAGTT
GGACTCTAGGCTATTCCGAATAAAAAACTTGTTTTgtatatcaaaaatca
aaatattgtggAGATAATGTAATGTTCGTGTGGTGTGCAGTTTTTTTTGC
ACGTGCAGAGCTCACCCAGGGAAAACTTCAATGTTCAAAATAGAAGCTGG
TGGAAACACACGTGTGGAAATTTACTTATTGATTAGAGccatgtcaaaat
tttgaaaacaattttgaatttNgaaggaaaataagagaaaaatttcaaaa
actatctaccaataataaactgagcatctcgatgttcttataaagcttgG
AGACAGAGATAGAGCAGCAATTAACTGAGAAGACAAtgtggtacatattc
cagccgcgacATTCTNTAAACGTACATGATTGGAACATGTACCAAGTTCC
GACGAGTTAACTTCTGATAGGAACCACTAAAAACTTGGTATGGCTTGACT
TAAAAGAAATACGACCTGTGAACTTATAGTGCGACGGGAGGACTTGAAAC
TTGGGATGATTCGACTACCGAAAACTGCGACGGGACGACTTCTagtacga
cgggacgacttgaaggattgaattttggcggcgatctaacttcatactgt
tgttctatctctgtcgtatttgatgacatttttttatcaagagatcagta
atgtagcatctttaatggtaaattttattggtttgtcgttaatacttact
tctcagtgtgtTTTAGATATTAATTatacccttgataatacacttgcatt
gtAAAATCAttatcaacaataagaaatttaaaataaacaaagtgcctcga
atgccttcgcaatatttcaNtacatattccagccgctgCATTCCTATACT
ATGCCGTGAGTATATTTTTCCAGATATACTGTTGGCAAGAGAGCCAGACC
TATACACCCCTTCTCAAAACGTTATGAAGTGTAGCAATTACTATTtacgt
tgaaaaaaaaaagtttattcttCATTTCTGAAGCATTCTTTGTCATTTTG
AAGTGATATAGGGAACTCTCAAAAGTCATTACGCGTAAAATCATTTCCAT
TTCGAGATTTCCTAGCCAATCAAAATACGAGCACAGAAAGCTGTACTAGG
TCTCTCCTGGCAACAAATTCCGTAGCTGAAGCCATCGCCatcatatataa
aaaaacagAAGGTTTGGATTCAGCAAACGGGTTTTTGTCGCCAGTTTTCT
GAACTAATTTTTCAATTGGTTCTATAGTTGGAGACGTACCACCACAGCAA
GGTGATGGTGATGTTGTTGGATTTCTACGATCATGGTTTTCGCTTCAGTG
AATCCGTTCGCAAGAAGATCGAAGTTGATTCCAAAAACCATTTGGATCAT
ATCCATGATATCCAGAAAGCTTTCTTTCAACATAAAGTGAAATTGTGTTC
CGCTTTCGCGAGGAATCGCATCAAAGCGTGCGCTCTCTCCTTGGACGCCA
TGTTGCCGGCTGAAGTGAAGGAACGTAACGAACATGGCTCGCGTCATTCT
TTGTTCACGTGGATCAACCCTTTTGTGGCTGACGCACATTGTATCATCAA
TCAGCTGAAGAGCGATGGTTTCGTTTACAAAGAATCTTTAGAAGAATTGA
GTGGATCGGAAGATAACGGACTTTATTTCTCTTATGAAGAAGATGGTGCA
AACACTGACTTGTTGGAGTTTCCTGCATGGTGTAAAGATGAAGTGTACAA
CCATCAATTAGCATTGGATTCGTCTCTTGTTCCAATGGTAAGCACCTTCT
TCCacaccatttttcatttttgatccAAAATAACATGTTGTAAGAAATTC
CACTGAACCTCTCTACTTTTTCGCATGATTGCTCTCCTCCTCTCGTGTAA
AAGAAGTAGTTTTGAATTATGCACATGTTTACAATACTGAGGGACCATTC
CATTGGACCCGTGACAACAATTTGTACTGTGGAATTTTTTATCGTTTAAA
GAAAGTTTATTATATTTGGAGACCTTTGGAGTTGAGTATGCGAATAAGAG
ATGTCAAAATGTATCATTATCATGGCCAGATCACTGACGTTACAGGCAAA
GCTGCAAGGGAAAGTGCGTAAAAATCATCAATTTCCAAAAGTCGAATTTA
ACAAAAAGGACTAATACTTCAGTTAGATCATTAAATTCTGATATGACCAA
AATTAGTATACTACAACTCTCTCGAACATACAATGACATAAGCACATTTT
AAGCTCGAAATTCTGTCTGGTCCAGTTCAGTTCTGTCTACCAATAGAAAA
CTCACCATATGTGTTGCTCGTAACAAATAAATGCTTCGATAATCTTTCGA
TATCTTCTCCAGAGTAAACCACGTTACCTGATGACAAAGGCGTGTCGGCG
TGCACACGATGAAGTGTGTCGAGTGCAACAGAAATCGCATCATCACGCTG
TTCTCCCGGCAACCGATGGCAAGGAGAATCATGATATGGTGAACGGTGGT
TGTGATGTCGTCCTCACTCATCCTGAAACTGGTATCTTTCTTTCTCTAAa
aggctacacgttttttataagaacataaggcttcgatggccaaaatttga
agaacaagttaaggtctctgaccatagtgaatttttaatatttgtcactt
acaaaatataaagttctacttgatgtagcacacaaaactgtggcatgtta
tacattttctgttaggccaattatccgtgagtctgaaaatttaagaatcg
caatgaaaaaatttgataaagaagaaaatgaagactttcgcgaagaagag
tatttcaactttgaaaagcttagtttcggcgaagaaaaaacattttgaaa
aattatttgcaGTAGATGGTttatcttttatcgaactaaaattatttttt
cggaatttttttctaaaagcttatttgcttcaaaatcttgaaaatagtgc
tttttgaccaattttccatcccaatttttcatagaaaaacagccataact
tttgatgcgttaatttagaaaatttttccgaaaaatctaaaacagttcaa
ttctttgcggggcagtttgaaaaaacttcgaaacaaaaaggttaattacc
cattaaaacttaaaactttttataaaagaaagtgaTGCAACATATAATTA
ACGTctctttaaagttcataacgtcatttttgcaattaaattcttaatta
ctcttaagggatttgattaaaaagcaatttataaaagcaatatttgtcaa
aagtgttaaaaacctaaaacataacttttgtGTTCAAAtacttaaatcaa
tttttcgagTATGGTCCGAGCCCTTAaggacattttaaggctttatggac
tctaaaacacccgacttttttggaaaatggtcaaaaaagctcaaaaagtg
TCTAAAAATCTACTTGATGCCATCATCGAATTCGTTAAACATCAAAAGAG
CATCCAAAGAAAATAATCATCTTCTATATTTTCATTCTTCAGGATCGTTG
GCGGCATACTTATGTTCCTTCCTTGGCACCAACAAACGTCTCTTTATCTT
TGGTTGTCATGGTGACAAAGCGGTAGAGGtcgagaaaaatttgaaaaata
ttggaatatcaAGTATCCTTTCACCTAGTGTTTTCCAATACTTTTTATTg
cctttattttttgaaaattaactcGTAGTTATTCAAGGTCTTATCCTTTG
TTCGCTTTCAGATAGATATCACGGACCTTAACAGTTCAAAATAGATTATG
TTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGGATCGATGACCGGCTT
TCATCCGTTAAACTGATCGTTTGTAACCCACCCTGTTCCAATAGCGGTGT
AGTGAACATGGTGGACTTTATCATACAGGAAGGAGCAGACACAGCCAGCA
GTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGAGGTCTAGCGGAAGAA
CAAGCCTCTACCATCAGGATTACTTTCTCTTTCCCAAATGTCCAATCCAT
TGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAAATGAGAAATTGGTGC
AACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAATCGTTTCGAGATGTGT
GTCGTCTTGGAAGATATGAGAGACATTTTCACCTCTAGCCAAGGTAAATG
CTTTGTAATTGACTTAAATAATAAGATTTAAAAGCTATTTGAAGACAAAG
ACAAAGTTGAACTCATCATTAATTTTAAAGCTCGAGGGGTTCAAACTgga
aactcctggatgggaaaggaagccacttatttcccatccaaaacgcgtga
cccgtatggttttcacacaaacgccagattggaAGTAAAAGCTATCGCAA
GATTTCGAAACACGCcgcttaaaaacaaagaaagagctAGATCTAATCTG
TCATTCTCAATGCggcgcaaatcttaaggcttcacttttacTTGCTTGAT
AAAGGTTACAGATTCATCTCTAaccccttcggggctttaaactcaatgga
acTCATCCTCCCTTTTTACAGGAAGTGTATCAAAtgtgctttctttcttt
ttgctaGATGGGGATTTCTTGAGAGTGGAACCTTCGTACAAAATGGATGG
TTTCTTTGTCACTTTGTTGAAACGAAAGGTTTGCTTTTCGATATTATTCT
TTCTTAGTTATTTGAACTATTAAACCTTCTGATCAAAGAAATAACCAAGT
TGATTTTTGACAGTACAGTGCTTATTGTCATTGTGATATTTGGATTTCTT
TAATGTTATATGCGAATTTCTTTGAGAGTCCTGTCATTTACACACTTCAC
TCGTTCTGCAGATCAAGGAGGATTCAGTGAGTGAAGTGATGGAGCGAGCG
GCCAAGAAAGGTTTATTAAAGAAATCGAGCGGTAAGAAAGAGAAGAGGAA
GGGCGTTCCCAAAGATCAACCGCCCCACGTCGCCAATCGGTTGTCGGTTG
TTGATAAGAAGAAGGCGGGGAGAAGCTCACCTAAACCACAAAAGAAACTG
GAAAGACGAGACACTGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00064366-exon-scaffold_412-1491911889:23438..23888 | TCONS_00064366-exon-scaffold_412-1491911889:23438..23888 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:23438..23888 | TCONS_00064366-exon-scaffold_412-1510915933:23438..23888 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:23438..23888 | TCONS_00064366-exon-scaffold_412-1575043694:23438..23888 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1491911889:24486..24544 | TCONS_00064366-exon-scaffold_412-1491911889:24486..24544 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:24486..24544 | TCONS_00064366-exon-scaffold_412-1510915933:24486..24544 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:24486..24544 | TCONS_00064366-exon-scaffold_412-1575043694:24486..24544 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1491911889:28415..28924 | TCONS_00064366-exon-scaffold_412-1491911889:28415..28924 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:28415..28924 | TCONS_00064366-exon-scaffold_412-1510915933:28415..28924 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:28415..28924 | TCONS_00064366-exon-scaffold_412-1575043694:28415..28924 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1491911889:29500..29668 | TCONS_00064366-exon-scaffold_412-1491911889:29500..29668 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:29500..29668 | TCONS_00064366-exon-scaffold_412-1510915933:29500..29668 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:29500..29668 | TCONS_00064366-exon-scaffold_412-1575043694:29500..29668 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1491911889:30630..30749 | TCONS_00064366-exon-scaffold_412-1491911889:30630..30749 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:30630..30749 | TCONS_00064366-exon-scaffold_412-1510915933:30630..30749 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:30630..30749 | TCONS_00064366-exon-scaffold_412-1575043694:30630..30749 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1491911889:30882..31280 | TCONS_00064366-exon-scaffold_412-1491911889:30882..31280 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:30882..31280 | TCONS_00064366-exon-scaffold_412-1510915933:30882..31280 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:30882..31280 | TCONS_00064366-exon-scaffold_412-1575043694:30882..31280 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1491911889:31695..31765 | TCONS_00064366-exon-scaffold_412-1491911889:31695..31765 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:31695..31765 | TCONS_00064366-exon-scaffold_412-1510915933:31695..31765 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:31695..31765 | TCONS_00064366-exon-scaffold_412-1575043694:31695..31765 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1491911889:31949..32156 | TCONS_00064366-exon-scaffold_412-1491911889:31949..32156 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1510915933:31949..32156 | TCONS_00064366-exon-scaffold_412-1510915933:31949..32156 | Clytia hemisphaerica | exon |
TCONS_00064366-exon-scaffold_412-1575043694:31949..32156 | TCONS_00064366-exon-scaffold_412-1575043694:31949..32156 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_412 | supercontig | scaffold_412:23438..32156 + |
Blast
BLAST of TCONS_00064366 vs. Swiss-Prot (Human)
Match: NSUN7 (Putative methyltransferase NSUN7 OS=Homo sapiens GN=NSUN7 PE=2 SV=4) HSP 1 Score: 162.155 bits (409), Expect = 5.670e-42 Identity = 148/543 (27.26%), Postives = 254/543 (46.78%), Query Frame = 1
Query: 238 NKREGEILDDNSKRPISREERA-----QIKFGHTIYNKAANLFELLK------------DNTVVQPKIEFENEFEKRRAYSLAFAAKRFEGILKDVLLDSTFYSSYFKLETYHHSKVMVMLLDFYDHGFRFSESVRKKIEVDSKNHLDHIHDIQKAFFQHKVKLCSAFARNRIKACALSLDAMLPAEVKERNEHGSRHSLFTWINPFVADAHCIINQLKSDGFVYKESLEELSGSEDNGLYFSYEEDGANTDLLEFPAWCKDEVYNHQLALDSSLVPMSKPRYLMTKACRRAHDEVCRVQQKSHHHAVLPATDGKENHDMVNGGCDVVLTHPETGSLAAYLCSFLGTNKRLFIFGCHGDKAVEVEKNLKN----IGISNYVLLSEDFKNIVGIDDRLSSVKLIVCNPPCSNSGVVNMVDFIIQEGADT--ASSLSKEATPV-KIRGLAEEQASTIRITFSFPNVQSIVYCSFSTFPEENEKLVQRVLQSQQ--NSKNRFEM---CVVLEDMRDIFTSSQDGDFLRVEPSYKMDGFFVTLLKRK 1779
N+ + EI+ + P+S + + + + ++Y AAN+F+ ++ N ++ E E++ +R +Y LAF+A +++ IL+ +L+DS + S + + S ++VML DF D F+ ++ D++ + + +++ K+KL +A AR RIK ALS+ +LP V+++ S L+ WIN + N LK G+ +S+ + D+ + + D D+L FP+ K+++ N L D L+ K R L H+V + ++ MVN G ++H S L N +F C G ++ + +LK IG N +L E F NI D RL VK+I+ P CS GV N V+FI+ E DT S+ V K+ LA++Q + F Q++VYC+ S FPEENE +V++ L+ Q N + + + L +++I S+ F R+EPS +G F+++L R+
Sbjct: 12 NEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIEKSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPST-TIPDHLSSLIIVMLYDFQDRKFQ------TRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHI----DDKV---FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAV-------------------HSVKALLNMDDDVLMVNTGSWYTVSH----------MSILTNNNTSKVFVC-GVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESKDHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYEQLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYRLSPPVLPLCSLKEIQLSTD--KFFRMEPSEITNGCFLSILTRE 508
The following BLAST results are available for this feature:
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