TCONS_00064366 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064366
Unique NameTCONS_00064366
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1987

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064366 ID=TCONS_00064366|Name=TCONS_00064366|organism=Clytia hemisphaerica|type=transcript|length=1987bp
TCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCATATTctgct
ttcatttttcttttcaccCAGGTGACAAACAGACGATAGAAGGAAAATGG
CTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTCTTGTTAACA
CCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAA
AGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATAAGAGAGAGG
GGGAAATACTGGACGATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGA
GCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGCCAATCTTTT
CGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCGAGTTTGAAA
ATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGA
TTCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTATTCAAG
TTATTTCAAGTTGGAGACGTACCACCACAGCAAGGTGATGGTGATGTTGT
TGGATTTCTACGATCATGGTTTTCGCTTCAGTGAATCCGTTCGCAAGAAG
ATCGAAGTTGATTCCAAAAACCATTTGGATCATATCCATGATATCCAGAA
AGCTTTCTTTCAACATAAAGTGAAATTGTGTTCCGCTTTCGCGAGGAATC
GCATCAAAGCGTGCGCTCTCTCCTTGGACGCCATGTTGCCGGCTGAAGTG
AAGGAACGTAACGAACATGGCTCGCGTCATTCTTTGTTCACGTGGATCAA
CCCTTTTGTGGCTGACGCACATTGTATCATCAATCAGCTGAAGAGCGATG
GTTTCGTTTACAAAGAATCTTTAGAAGAATTGAGTGGATCGGAAGATAAC
GGACTTTATTTCTCTTATGAAGAAGATGGTGCAAACACTGACTTGTTGGA
GTTTCCTGCATGGTGTAAAGATGAAGTGTACAACCATCAATTAGCATTGG
ATTCGTCTCTTGTTCCAATGAGTAAACCACGTTACCTGATGACAAAGGCG
TGTCGGCGTGCACACGATGAAGTGTGTCGAGTGCAACAGAAATCGCATCA
TCACGCTGTTCTCCCGGCAACCGATGGCAAGGAGAATCATGATATGGTGA
ACGGTGGTTGTGATGTCGTCCTCACTCATCCTGAAACTGGATCGTTGGCG
GCATACTTATGTTCCTTCCTTGGCACCAACAAACGTCTCTTTATCTTTGG
TTGTCATGGTGACAAAGCGGTAGAGGtcgagaaaaatttgaaaaatattg
gaatatcaAATTATGTTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGG
ATCGATGACCGGCTTTCATCCGTTAAACTGATCGTTTGTAACCCACCCTG
TTCCAATAGCGGTGTAGTGAACATGGTGGACTTTATCATACAGGAAGGAG
CAGACACAGCCAGCAGTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGA
GGTCTAGCGGAAGAACAAGCCTCTACCATCAGGATTACTTTCTCTTTCCC
AAATGTCCAATCCATTGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAA
ATGAGAAATTGGTGCAACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAAT
CGTTTCGAGATGTGTGTCGTCTTGGAAGATATGAGAGACATTTTCACCTC
TAGCCAAGATGGGGATTTCTTGAGAGTGGAACCTTCGTACAAAATGGATG
GTTTCTTTGTCACTTTGTTGAAACGAAAGATCAAGGAGGATTCAGTGAGT
GAAGTGATGGAGCGAGCGGCCAAGAAAGGTTTATTAAAGAAATCGAGCGG
TAAGAAAGAGAAGAGGAAGGGCGTTCCCAAAGATCAACCGCCCCACGTCG
CCAATCGGTTGTCGGTTGTTGATAAGAAGAAGGCGGGGAGAAGCTCACCT
AAACCACAAAAGAAACTGGAAAGACGAGACACTGANN
Run BLAST on NCBI

transcript from alignment at scaffold_412:23438..32156+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064366 ID=TCONS_00064366|Name=TCONS_00064366|organism=Clytia hemisphaerica|type=transcript|length=8719bp|location=Sequence derived from alignment at scaffold_412:23438..32156+ (Clytia hemisphaerica)
TCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCATATTctgct ttcatttttcttttcaccCAGGTGACAAACAGACGATAGAAGGAAAATGG CTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTCTTGTTAACA CCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAA AGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATAAGAGAGAGG GGGAAATACTGGACGATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGA GCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGCCAATCTTTT CGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCGAGTTTGAAA ATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGA TGTAAGTGACTTTCTCCTCTTTTGAGTTTTATGAGTTTAGTTAACAGTTG ATGCCCGCTTTCCAAGGTAAATCAAATTTATACCAAATACTGGAACTTAT CAAATAATGAATAGTCCGCCTGTTCCGGTAAAAACGAGgtaaaaatctaa tttaaaaatcGAGAATATAAATTTCAGTGAGACTCTTGAACGCTAaccaa aataataatattgaaggCCTCGATGAAGCCTAACTTGTTTGCAAAATATC TCCGAATTTTATCTgttctgaaaatcaaattttaatcaaatttctcgatt tagaaaatcaaaagatttgaaaaatctagTTTGCGAGCTCCGTTCTTTAG GTCTTCATATTTTAACCCGCTGAAATGGAATAAGAGAGCGAAAAACCTTT GATTTTAAATCTAAAACGTGAGGTTATCATATTCCGGTATAGAATGTCGA AATGTATCGGTTGTGAGGTTTTCTCTCCAATAAATTTGAAAGTTGGCTTC CATTCATTGAGAACGGAAGTTTGTCGATTGTAGGACGTGGAATTAGTAAG ACTTTCAACGTTaatattcattctttttttcttgcgtTTACCTTATAGTC GAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTATTCAAGTTA TTTCAAGGTACGTATTTTGATACTGTTATCACTGCAGGATTTCACTTTAT TTACCTTTAGGGTGTTTTCAAGCTCGTGTCctatttttgcttggttagcg TCTGTGAAAATGAAAGCTCACTTAAAATATGTGAACACCCTTTTtctgaa ttcttttcaaaaaaaattttaagccaaagtggaagaaaagttattggatt tcattttggtaaaatcgcgatcttaaaatcttgcTTTTGGTCCAGAGTTA taacaatttaaattttaaaacagaGTTTGCTTTATGAATTATGTTACTCa ttaattgtctctttcggaaagaACAAAGAGAAAAGACAAGGTCCAGCTTA CGTTTATTCTCACATCTATGGAATAGTAACATTTtgacacattttgctga ttaaTCAATTAAACAGCAATTGTCTcgctaaaaatttcaaatcgatgtag agaaaaatgaaattttactataccatactacttttaacgaagttaaagtg tATGAGTGACTACTAGCTATCGACTccattcttttttataagattccCGA AAGGTCAAACTTAAAAAGCGCATTTGAATTAaccttttggacctaccccg gaggtcctttaatcgttcgttcgttcgttcgtctgttaccagcttttctc gcgATTTTTTGCATAGAGATGCAAATCGACAGTACCCAAAaggtgacgaa gcccgatttttgtaaaaaacttttttgggcaaatttagggccgtaaaaat cagattttcttaattggggaaattcccttttatcatttttatggaAAATG AGCATTCCTCGCGACTGCCTTGGTATTTTAcctgattttttgtaaaattg taaattttaaaatctgatcgagcccgattttcgaaacaataattatttgg gcaaatttgtccaaaaagtGTCTAAAAATAGGATCATTGCATGAATGATA ATGggcaaagttctttaaaaagtggCTGAATCAGTTTTTTCGGATAActt tttttggccgtaaaaatttATTaatcttatttggggaaatttccctttgt catttttagggaaatgagcatttctcgcaACGTCGCAACTGCCTTGGTAT TTTGTCTGATTTTTTggacaatgatgtaaaatggtaacgtttaagggctc tgaccatagtgaatttttaatatttgccagtggcaaatttttttcattgc aattcttaaattttcagatttcaagGATAATTGTACGTgacgtacaaaat ataaatttctacttgatgtagcccacaagacttgacgaagaagaaaattt ttgcgaagaagagtatttcaactttgaagaacttattttcggcgaagaaa aaacaatttttcatcccaatttttcatagaaaaacagccataacttttga tacattatttagaaaatttttccgaaaaatttaaaacagttcaattcttt gcggacagtatgaaaaaacttcgaaacaaaaaagttaattacccattaaa actttttataaaagaaggtaatgcaacatattactaacgtctttttaaag ttcatagcgtcattttcgcaattaaattcttaattactcttaggggattt gattaaaaagcaatttaaaaaggcaattctttgttaaagtgttaaagaag ctaaaacataacttttatgttcaaatactaaagtCATAttttcgactatg gtcagagcccttaaaatctgatggagcccgattttcaaaagaaaaatttt aggcaaatttgggtcGAATTCAGATTTGTAGAAGTTGCTTCATTCAATTT TATCTTTAATGAGAAAGAGTTATGAAAGAAAGGATCGTTTTTGTTTACTC CTTGGGGCTACTTAGCTCTAAAATATCGGAAAGCCGACGTGAAACAAGTT GCATCATGTTTTCAAGTTTACGCATCTCTATGCTATGCTGTTATCTTTTC CATTTCGTTCGAACATTTTCATTTAACACGTTTCCGACTACCtatatcag gtaggtccattcagcacgttgcttgttttcaatatttttacaaagatttt atcAAGATTTAACGAGTTAAAGTCAAtgtaaagaaaaatctttttagttc aatctattgaatttttaaaatggtGTCGTTAAAAATTTTGAGTAGAAACT CTTCCGCAATATGACATATCAAAGGCCTTCAGAACATAGTACCGAAATTA TTTTTCCAGAATTTAAAAGCTATGGGCGACTTCACCTTCTTTGAAGTAGG CAatgttgaaattttaaattttaattactGGCTTTCAGAAATACATATTT TGATGtacaaaaatttgttgttctaaagatatggcCAAGGAAAGAGAATT TGTCATAAAGGGTGTCCACATACCTTAACACATCCCgtaagcatagtata agaacgccgcggctggaatgataacatctgaacttCTGTTGATTGAAGTT AGATCGCCGCCAAAATTCGATCCTTCAAGTCGTCCCGACGTACTAgaagt cgtcccgtcgcactAGAAGTCCGCAGGTCGCATTAGAAGTCTGCAAGTCG GAATCTTTTGGAAGTCGAAACATTCCAAAGTTTAAGTCGAGTCGTTGCTT CAGAAGTTGACTCGTCGCAAATTTCGGCAGTCGACTCATCCCAAAAAGTT GGACTCTAGGCTATTCCGAATAAAAAACTTGTTTTgtatatcaaaaatca aaatattgtggAGATAATGTAATGTTCGTGTGGTGTGCAGTTTTTTTTGC ACGTGCAGAGCTCACCCAGGGAAAACTTCAATGTTCAAAATAGAAGCTGG TGGAAACACACGTGTGGAAATTTACTTATTGATTAGAGccatgtcaaaat tttgaaaacaattttgaatttNgaaggaaaataagagaaaaatttcaaaa actatctaccaataataaactgagcatctcgatgttcttataaagcttgG AGACAGAGATAGAGCAGCAATTAACTGAGAAGACAAtgtggtacatattc cagccgcgacATTCTNTAAACGTACATGATTGGAACATGTACCAAGTTCC GACGAGTTAACTTCTGATAGGAACCACTAAAAACTTGGTATGGCTTGACT TAAAAGAAATACGACCTGTGAACTTATAGTGCGACGGGAGGACTTGAAAC TTGGGATGATTCGACTACCGAAAACTGCGACGGGACGACTTCTagtacga cgggacgacttgaaggattgaattttggcggcgatctaacttcatactgt tgttctatctctgtcgtatttgatgacatttttttatcaagagatcagta atgtagcatctttaatggtaaattttattggtttgtcgttaatacttact tctcagtgtgtTTTAGATATTAATTatacccttgataatacacttgcatt gtAAAATCAttatcaacaataagaaatttaaaataaacaaagtgcctcga atgccttcgcaatatttcaNtacatattccagccgctgCATTCCTATACT ATGCCGTGAGTATATTTTTCCAGATATACTGTTGGCAAGAGAGCCAGACC TATACACCCCTTCTCAAAACGTTATGAAGTGTAGCAATTACTATTtacgt tgaaaaaaaaaagtttattcttCATTTCTGAAGCATTCTTTGTCATTTTG AAGTGATATAGGGAACTCTCAAAAGTCATTACGCGTAAAATCATTTCCAT TTCGAGATTTCCTAGCCAATCAAAATACGAGCACAGAAAGCTGTACTAGG TCTCTCCTGGCAACAAATTCCGTAGCTGAAGCCATCGCCatcatatataa aaaaacagAAGGTTTGGATTCAGCAAACGGGTTTTTGTCGCCAGTTTTCT GAACTAATTTTTCAATTGGTTCTATAGTTGGAGACGTACCACCACAGCAA GGTGATGGTGATGTTGTTGGATTTCTACGATCATGGTTTTCGCTTCAGTG AATCCGTTCGCAAGAAGATCGAAGTTGATTCCAAAAACCATTTGGATCAT ATCCATGATATCCAGAAAGCTTTCTTTCAACATAAAGTGAAATTGTGTTC CGCTTTCGCGAGGAATCGCATCAAAGCGTGCGCTCTCTCCTTGGACGCCA TGTTGCCGGCTGAAGTGAAGGAACGTAACGAACATGGCTCGCGTCATTCT TTGTTCACGTGGATCAACCCTTTTGTGGCTGACGCACATTGTATCATCAA TCAGCTGAAGAGCGATGGTTTCGTTTACAAAGAATCTTTAGAAGAATTGA GTGGATCGGAAGATAACGGACTTTATTTCTCTTATGAAGAAGATGGTGCA AACACTGACTTGTTGGAGTTTCCTGCATGGTGTAAAGATGAAGTGTACAA CCATCAATTAGCATTGGATTCGTCTCTTGTTCCAATGGTAAGCACCTTCT TCCacaccatttttcatttttgatccAAAATAACATGTTGTAAGAAATTC CACTGAACCTCTCTACTTTTTCGCATGATTGCTCTCCTCCTCTCGTGTAA AAGAAGTAGTTTTGAATTATGCACATGTTTACAATACTGAGGGACCATTC CATTGGACCCGTGACAACAATTTGTACTGTGGAATTTTTTATCGTTTAAA GAAAGTTTATTATATTTGGAGACCTTTGGAGTTGAGTATGCGAATAAGAG ATGTCAAAATGTATCATTATCATGGCCAGATCACTGACGTTACAGGCAAA GCTGCAAGGGAAAGTGCGTAAAAATCATCAATTTCCAAAAGTCGAATTTA ACAAAAAGGACTAATACTTCAGTTAGATCATTAAATTCTGATATGACCAA AATTAGTATACTACAACTCTCTCGAACATACAATGACATAAGCACATTTT AAGCTCGAAATTCTGTCTGGTCCAGTTCAGTTCTGTCTACCAATAGAAAA CTCACCATATGTGTTGCTCGTAACAAATAAATGCTTCGATAATCTTTCGA TATCTTCTCCAGAGTAAACCACGTTACCTGATGACAAAGGCGTGTCGGCG TGCACACGATGAAGTGTGTCGAGTGCAACAGAAATCGCATCATCACGCTG TTCTCCCGGCAACCGATGGCAAGGAGAATCATGATATGGTGAACGGTGGT TGTGATGTCGTCCTCACTCATCCTGAAACTGGTATCTTTCTTTCTCTAAa aggctacacgttttttataagaacataaggcttcgatggccaaaatttga agaacaagttaaggtctctgaccatagtgaatttttaatatttgtcactt acaaaatataaagttctacttgatgtagcacacaaaactgtggcatgtta tacattttctgttaggccaattatccgtgagtctgaaaatttaagaatcg caatgaaaaaatttgataaagaagaaaatgaagactttcgcgaagaagag tatttcaactttgaaaagcttagtttcggcgaagaaaaaacattttgaaa aattatttgcaGTAGATGGTttatcttttatcgaactaaaattatttttt cggaatttttttctaaaagcttatttgcttcaaaatcttgaaaatagtgc tttttgaccaattttccatcccaatttttcatagaaaaacagccataact tttgatgcgttaatttagaaaatttttccgaaaaatctaaaacagttcaa ttctttgcggggcagtttgaaaaaacttcgaaacaaaaaggttaattacc cattaaaacttaaaactttttataaaagaaagtgaTGCAACATATAATTA ACGTctctttaaagttcataacgtcatttttgcaattaaattcttaatta ctcttaagggatttgattaaaaagcaatttataaaagcaatatttgtcaa aagtgttaaaaacctaaaacataacttttgtGTTCAAAtacttaaatcaa tttttcgagTATGGTCCGAGCCCTTAaggacattttaaggctttatggac tctaaaacacccgacttttttggaaaatggtcaaaaaagctcaaaaagtg TCTAAAAATCTACTTGATGCCATCATCGAATTCGTTAAACATCAAAAGAG CATCCAAAGAAAATAATCATCTTCTATATTTTCATTCTTCAGGATCGTTG GCGGCATACTTATGTTCCTTCCTTGGCACCAACAAACGTCTCTTTATCTT TGGTTGTCATGGTGACAAAGCGGTAGAGGtcgagaaaaatttgaaaaata ttggaatatcaAGTATCCTTTCACCTAGTGTTTTCCAATACTTTTTATTg cctttattttttgaaaattaactcGTAGTTATTCAAGGTCTTATCCTTTG TTCGCTTTCAGATAGATATCACGGACCTTAACAGTTCAAAATAGATTATG TTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGGATCGATGACCGGCTT TCATCCGTTAAACTGATCGTTTGTAACCCACCCTGTTCCAATAGCGGTGT AGTGAACATGGTGGACTTTATCATACAGGAAGGAGCAGACACAGCCAGCA GTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGAGGTCTAGCGGAAGAA CAAGCCTCTACCATCAGGATTACTTTCTCTTTCCCAAATGTCCAATCCAT TGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAAATGAGAAATTGGTGC AACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAATCGTTTCGAGATGTGT GTCGTCTTGGAAGATATGAGAGACATTTTCACCTCTAGCCAAGGTAAATG CTTTGTAATTGACTTAAATAATAAGATTTAAAAGCTATTTGAAGACAAAG ACAAAGTTGAACTCATCATTAATTTTAAAGCTCGAGGGGTTCAAACTgga aactcctggatgggaaaggaagccacttatttcccatccaaaacgcgtga cccgtatggttttcacacaaacgccagattggaAGTAAAAGCTATCGCAA GATTTCGAAACACGCcgcttaaaaacaaagaaagagctAGATCTAATCTG TCATTCTCAATGCggcgcaaatcttaaggcttcacttttacTTGCTTGAT AAAGGTTACAGATTCATCTCTAaccccttcggggctttaaactcaatgga acTCATCCTCCCTTTTTACAGGAAGTGTATCAAAtgtgctttctttcttt ttgctaGATGGGGATTTCTTGAGAGTGGAACCTTCGTACAAAATGGATGG TTTCTTTGTCACTTTGTTGAAACGAAAGGTTTGCTTTTCGATATTATTCT TTCTTAGTTATTTGAACTATTAAACCTTCTGATCAAAGAAATAACCAAGT TGATTTTTGACAGTACAGTGCTTATTGTCATTGTGATATTTGGATTTCTT TAATGTTATATGCGAATTTCTTTGAGAGTCCTGTCATTTACACACTTCAC TCGTTCTGCAGATCAAGGAGGATTCAGTGAGTGAAGTGATGGAGCGAGCG GCCAAGAAAGGTTTATTAAAGAAATCGAGCGGTAAGAAAGAGAAGAGGAA GGGCGTTCCCAAAGATCAACCGCCCCACGTCGCCAATCGGTTGTCGGTTG TTGATAAGAAGAAGGCGGGGAGAAGCTCACCTAAACCACAAAAGAAACTG GAAAGACGAGACACTGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040357XLOC_040357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064366-exon-scaffold_412-1491911889:23438..23888TCONS_00064366-exon-scaffold_412-1491911889:23438..23888Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:23438..23888TCONS_00064366-exon-scaffold_412-1510915933:23438..23888Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:23438..23888TCONS_00064366-exon-scaffold_412-1575043694:23438..23888Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1491911889:24486..24544TCONS_00064366-exon-scaffold_412-1491911889:24486..24544Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:24486..24544TCONS_00064366-exon-scaffold_412-1510915933:24486..24544Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:24486..24544TCONS_00064366-exon-scaffold_412-1575043694:24486..24544Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1491911889:28415..28924TCONS_00064366-exon-scaffold_412-1491911889:28415..28924Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:28415..28924TCONS_00064366-exon-scaffold_412-1510915933:28415..28924Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:28415..28924TCONS_00064366-exon-scaffold_412-1575043694:28415..28924Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1491911889:29500..29668TCONS_00064366-exon-scaffold_412-1491911889:29500..29668Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:29500..29668TCONS_00064366-exon-scaffold_412-1510915933:29500..29668Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:29500..29668TCONS_00064366-exon-scaffold_412-1575043694:29500..29668Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1491911889:30630..30749TCONS_00064366-exon-scaffold_412-1491911889:30630..30749Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:30630..30749TCONS_00064366-exon-scaffold_412-1510915933:30630..30749Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:30630..30749TCONS_00064366-exon-scaffold_412-1575043694:30630..30749Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1491911889:30882..31280TCONS_00064366-exon-scaffold_412-1491911889:30882..31280Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:30882..31280TCONS_00064366-exon-scaffold_412-1510915933:30882..31280Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:30882..31280TCONS_00064366-exon-scaffold_412-1575043694:30882..31280Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1491911889:31695..31765TCONS_00064366-exon-scaffold_412-1491911889:31695..31765Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:31695..31765TCONS_00064366-exon-scaffold_412-1510915933:31695..31765Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:31695..31765TCONS_00064366-exon-scaffold_412-1575043694:31695..31765Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1491911889:31949..32156TCONS_00064366-exon-scaffold_412-1491911889:31949..32156Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1510915933:31949..32156TCONS_00064366-exon-scaffold_412-1510915933:31949..32156Clytia hemisphaericaexon
TCONS_00064366-exon-scaffold_412-1575043694:31949..32156TCONS_00064366-exon-scaffold_412-1575043694:31949..32156Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_412supercontigscaffold_412:23438..32156 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.64154 1.81759 0.813281 1.10109 30.5575 24.4112 34.0329 31.8753 45.241 49.0403 29.3622 38.714 3.88518 3.33805 3.71834 3.99626 4.70845 3.43008 5.69605 6.38048 4.30229 3.62357 6.22541 6.00686 25.3084 15.6714 6.49508 8.04463 9.33365 11.3284
Blast
BLAST of TCONS_00064366 vs. Swiss-Prot (Human)
Match: NSUN7 (Putative methyltransferase NSUN7 OS=Homo sapiens GN=NSUN7 PE=2 SV=4)

HSP 1 Score: 162.155 bits (409), Expect = 5.670e-42
Identity = 148/543 (27.26%), Postives = 254/543 (46.78%), Query Frame = 1
Query:  238 NKREGEILDDNSKRPISREERA-----QIKFGHTIYNKAANLFELLK------------DNTVVQPKIEFENEFEKRRAYSLAFAAKRFEGILKDVLLDSTFYSSYFKLETYHHSKVMVMLLDFYDHGFRFSESVRKKIEVDSKNHLDHIHDIQKAFFQHKVKLCSAFARNRIKACALSLDAMLPAEVKERNEHGSRHSLFTWINPFVADAHCIINQLKSDGFVYKESLEELSGSEDNGLYFSYEEDGANTDLLEFPAWCKDEVYNHQLALDSSLVPMSKPRYLMTKACRRAHDEVCRVQQKSHHHAVLPATDGKENHDMVNGGCDVVLTHPETGSLAAYLCSFLGTNKRLFIFGCHGDKAVEVEKNLKN----IGISNYVLLSEDFKNIVGIDDRLSSVKLIVCNPPCSNSGVVNMVDFIIQEGADT--ASSLSKEATPV-KIRGLAEEQASTIRITFSFPNVQSIVYCSFSTFPEENEKLVQRVLQSQQ--NSKNRFEM---CVVLEDMRDIFTSSQDGDFLRVEPSYKMDGFFVTLLKRK 1779
            N+ + EI+   +  P+S  + +     +  +  ++Y  AAN+F+ ++             N  ++   E E++  +R +Y LAF+A +++ IL+ +L+DS  + S   +  +  S ++VML DF D  F+       ++  D++  +  + +++      K+KL +A AR RIK  ALS+  +LP  V+++    S   L+ WIN        + N LK  G+   +S+  +    D+ +   +  D    D+L FP+  K+++ N  L  D  L+   K R L                     H+V    +  ++  MVN G    ++H           S L  N    +F C G ++   + +LK     IG  N  +L E F NI   D RL  VK+I+  P CS  GV N V+FI+ E  DT      S+    V K+  LA++Q   +     F   Q++VYC+ S FPEENE +V++ L+ Q   N    + +    + L  +++I  S+    F R+EPS   +G F+++L R+
Sbjct:   12 NEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIEKSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPST-TIPDHLSSLIIVMLYDFQDRKFQ------TRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHI----DDKV---FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAV-------------------HSVKALLNMDDDVLMVNTGSWYTVSH----------MSILTNNNTSKVFVC-GVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESKDHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYEQLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYRLSPPVLPLCSLKEIQLSTD--KFFRMEPSEITNGCFLSILTRE 508          
The following BLAST results are available for this feature:
BLAST of TCONS_00064366 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NSUN75.670e-4227.26Putative methyltransferase NSUN7 OS=Homo sapiens G... [more]
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