TCONS_00064362 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064362
Unique NameTCONS_00064362
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2523

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064362 ID=TCONS_00064362|Name=TCONS_00064362|organism=Clytia hemisphaerica|type=transcript|length=2523bp
AAAAAACTTATACCTATAACTTAGGACATTTTGGAAggcaaaaaaattct
ttgtcgCCCAACTATGATAGTGACATTCAAAACCCCTgaattgaaattct
attgttcagaCCAAAACGGTGGAAaggaaaagtgcttggaaaatGCCCTG
CTTGGATAACCAGAGAGTGCAAACGATTACCTCAACGCAAGGAACCTCTC
TACAAGTGGGCTAAGCATGCAAATATGGGATGCAGTGACCACGCACTGAC
CACGAAAAGAATGTCTgagtttttctgaatttttatcGAATCGAATATTT
TGGACGTACGTGATTTCCAATCAGCATTTatcattcatttttattttgat
ccTGCCAAACACTGAAATTCCAATATCTCCTTCATCTATAATTAATAGAT
GAAGAAAAGGACGGAACTTAAAAATATCTGAAAGAATAATTAAGAAAAAA
TATCCCCATTTACTGATATTATATCTCCATTGTGGATCGAGAAAGGATGT
TTTTATATCCTTTTGTTTTATATTCATGTCAAAATCTCACAGTCAAACGT
GAAGGCGGATAAGCTCCACGATTTCCATATTctgctttcatttttctttt
cactcAGGTGACAAACAGACGATAGAAGGAAAATGGCTACAAAGAGTAGT
AAGGCGAGAGACCCAAACATCAAACTCTTGTTAACACCTGAAGCTGAGCG
AAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAAAGAAAGAAGGAGGC
CTTCTTTGACCGATCACAATCGAAATAAGAGAGAGGGGGAAATACTTGAC
GATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGAGCACAGATCAAGTT
TGGACATACCATTTACAATAAAGCTGCCAATCTTTTCGAATTGCTGAAAG
ACAACACCGTCGTCCAACCGAAAATCGGGTTTGAAAATGAATTCGAAAAA
CGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGATTCGAGGGCATTTT
GAAAGATGTTTTGCTGGATAGTACATTTTATTCAAGTTATTTCAAGTTGG
AGACGTACCACCACAGCAAGGTGATGGTGATGTTGTTGGATTTCTACGAT
CATGGTTTTCGCTTCAGTGAATCCGTTCGCAAGAAGATCGAAGTTGATTC
CAAAAACCATTTGGATCATATCCATGATATCCAGAAAGCTTTCTTTCAAC
ATAAAGTGAAATTGTGTTCCGCTTTCGCGAGGAATCGCATCAAAGCGTGC
GCTCTCTCCTTGGACGCCATGTTGCCGGCTGAAGTGAAGGAACGTAACGA
ACATGGCTCGCGTCATTCTTTGTTCACGTGGATCAACCCTTTTGTGGCTG
ACGCACATTGTATCATCAATCAGCTGAAGAGCGATGGTTTCGTTTACAAA
GAATCTTTAGAAGAATTGAGTGGATCGGAAGATAACGGACTTTATTTCTC
TTATGAAGAAGATGGTGCAAACACTGACTTGTTGGAGTTTCCTGCATGGT
GTAAAGATGAAGTGTACAACCATCAATTAGCATTGGATTCGTCTCTTGTT
CCAATGAGTAAACCACGTTACCTGATGACAAAGGCGTGTCGGCGTGCACA
CGATGAAGTGTGTCGAGTGCAACAGAAATCGCATCATCACGCTGTTCTCC
CGGCAACCGATGGCAAGGAGAATCATGATATGGTGAACGGTGGTTGTGAT
GTCGTCCTCACTCATCCTGAAACTGGATCGTTGGCGGCATACTTATGTTC
CTTCCTTGGCACCAACAAACGTCTCTTTATCTTTGGTTGTCATGGTGACA
AAGCGGTAGAGGtcgagaaaaatttgaaaaatattggaatatcaAATTAT
GTTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGGATCGATGACCGGCT
TTCATCCGTTAAACTGATCGTTTGTAACCCACCCTGTTCCAATAGCGGTG
TAGTGAACATGGTGGACTTTATCATACAGGAAGGAGCAGACACAGCCAGC
AGTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGAGGTCTAGCGGAAGA
ACAAGCCTCTACCATCAGGATTACTTTCTCTTTCCCAAATGTCCAATCCA
TTGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAAATGAGAAATTGGTG
CAACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAATCGTTTCGAGATGTG
TGTCGTCTTGGAAGATATGAGAGACATTTTCACCTCTAGCCAAGATGGGG
ATTTCTTGAGAGTGGAACCTTCGTACAAAATGGATGGTTTCTTTGTCACT
TTGTTGAAACGAAAGATCAAGGAGGATTCAGTGAGTGAAGTGATGGAGCG
AGCGGCCAAGAAAGGTTTATTAAAGAAATCGAGCGGTAAGAAAGAGAAGA
GGAAGGGCGTTCCCAAAGATCAACCGCCCCACGTCGCCAATCGGTTGTCG
GTTGTTGATAAGAAGAAGGCGGGGAGAAGCTCACCTAAACCACAAAAGAA
ACTGGAAAGACGAGACACTGANN
Run BLAST on NCBI

transcript from alignment at scaffold_412:20747..32156+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064362 ID=TCONS_00064362|Name=TCONS_00064362|organism=Clytia hemisphaerica|type=transcript|length=11410bp|location=Sequence derived from alignment at scaffold_412:20747..32156+ (Clytia hemisphaerica)
AAAAAACTTATACCTATAACTTAGGACATTTTGGAAggcaaaaaaattct
ttgtcgCCCAACTATGATAGTGACATTCAAAACCCCTgaattgaaattct
attgttcagaCCAAAACGGTGGAAaggaaaagtgcttggaaaatGCCCTG
CTTGGATAACCAGAGAGTGCAAACGATTACCTCAACGCAAGGAACCTCTC
TACAAGTGGGCTAAGCATGCAAATATGGGATGCAGTGACCACGCACTGAC
CACGAAAAGAATGTCTgagtttttctgaatttttatcGAATCGAATATTT
TGGACGTACGTGATTTCCAATCAGCATTTatcattcatttttattttgat
ccTGCCAAACACTGAAATTCCAATATCTCCTTCATCTATAATTAATAGAT
GAAGAAAAGGACGGAACTTAAAAATATCTGAAAGAATAATTAAGAAAAAA
TATCCCCATTTACTGATATTATATCTCCATTGTGGATCGAGAAAGGATGT
TTTTATATCCTTTTGTTTTATATTCATGTCAAAATCTCACAGTCAAACGT
GAAGGCGGATAAGCTCCACGATTTCCATATTctgctttcatttttctttt
cactcAGGTGACAAACAGACGATAGAAGGAAAATGGCTACAAAGAGTAGT
AAGGCGAGAGACCCAAACATCAAACTCTTGTTAACACCTGAAGCTGAGCG
AAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAAAGAAAGAAGGAGGC
CTTCTTTGACCGATCACAATCGAAATAAGAGAGAGGGGGAAATACTTGAC
GATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGAGCACAGATCAAGTT
TGGACATACCATTTACAATAAAGCTGCCAATCTTTTCGAATTGCTGAAAG
ACAACACCGTCGTCCAACCGAAAATCGGGTTTGAAAATGAATTCGAAAAA
CGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGATGTAAGTGACTTTC
TCCTCTTTTGAGTTTTATGAGTTTAGTTAACAGTTGATGCCCGCTTTCCA
AGGTAAATCAAATTTATACCAAATACTGGAACTTATCAAATAATGAATAG
TCCGCCTGTTCCGGTAAAAACGAGgtaaaaatctaatttaaaaatcGAGA
ATATAAATTTCAGTGAGACTCTTGAACGCTAaccaaaataataatattga
aggCCTCGATGAAGCCTAACTTGTTTGCAAAATATCTCCGAATTTTATCT
gttctgaaaatcaaattttaatcaaatttctcgatttagaaaatcaaaag
atttgaaaaatctagTTTGCGAGCTCCGTTCTTTAGGTCTTCATATTTTA
ACCCGCTGAAATGGAATAAGAGAGCGAAAAACCTTTGATTTTAAATCTAA
AACGTGAGGTTATCATATTCCGGTATAGAATGTCGAAATGTATCGGTTGT
GAGGTTTTCTCTCCAATAAATTTGAAAGTTGGCTTCCATTCATTGAGAAC
GGAAGTTTGTCGATTGTAGGACGTGGAATTAGTAAGACTTTCAACGTTaa
tattcattctttttttcttgcgtTTACCTTATAGTCGAGGGCATTTTGAA
AGATGTTTTGCTGGATAGTACATTTTATTCAAGTTATTTCAAGGTACGTA
TTTTGATACTGTTATCACTGCAGGATTTCACTTTATTTACCTTTAGGGTG
TTTTCAAGCTCGTGTCctatttttgcttggttagcgTCTGTGAAAATGAA
AGCTCACTTAAAATATGTGAACACCCTTTTtctgaattcttttcaaaaaa
aattttaagccaaagtggaagaaaagttattggatttcattttggtaaaa
tcgcgatcttaaaatcttgcTTTTGGTCCAGAGTTAtaacaatttaaatt
ttaaaacagaGTTTGCTTTATGAATTATGTTACTCattaattgtctcttt
cggaaagaACAAAGAGAAAAGACAAGGTCCAGCTTACGTTTATTCTCACA
TCTATGGAATAGTAACATTTtgacacattttgctgattaaTCAATTAAAC
AGCAATTGTCTcgctaaaaatttcaaatcgatgtagagaaaattgaaatt
ttactataccatactacttttaacgaagttaaagtgtATGAGTGACTACT
AGCTATCGACTccattcttttttataagattccCGAAAGGTCAAACTTAA
AAAGCGCATTTGAATTAaccttttggacctaccccggaggtcctttaatc
gttcgttcgttcgtctgttaccagcttttctcgcgATTTTTTGCATAGAG
ATGCAAATCGACAGTACCCAAAaggtgacgaagcccgatttttgtaaaaa
acttttttgggcaaatttagggccgtaaaaatcagattttcttaATTGGG
GAAATTcacttttatcatttttagggaNTCTGAATTTTTATCGAATCGAA
TATTTTGGACGTACGTGATTTCCAATCAGCATTTatcattcatttttatt
ttgatccTGCCAAACACTGAAATTCCAATATCTCCTTCATCTATAATTAA
TAGATGAAGAAAAGGACGGAACTTAAAAATATCTGAAAGAATAATTAAGA
AAAAATATCCCCATTTACTGATATTATATCTCCATTGTGGATCGAGAAAG
GATGTTTTTATATCCTTTTGTTTTATATTCATGTCAAAATCTCACAGTCA
AACGTGAAGGCGGATAAGCTCCACGATTTCCATATTctgctttcattttt
cttttcaccCAGGTGACAAACAGACGATAGAAGGAAAATGGCTACAAAGA
GTAGTAAGGCGAGAGACCCAAACATCAAACTCTTGTTAACACCTGAAGCT
GAGCGAAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAAAGAAAGAAG
GAGGCCTTCTTTGACCGATCACAATCGAAATAAGAGAGAGGGGGAAATAC
TGGACGATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGAGCACAGATC
AAGTTTGGACATACCATTTACAATAAAGCTGCCAATCTTTTCGAATTGCT
GAAAGACAACACCGTCGTCCAACCGAAAATCGAGTTTGAAAATGAATTCG
AAAAACGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGATGTAAGTGA
CTTTCTCCTCTTTTGAGTTTTATGAGTTTAGTTAACAGTTGATGCCCGCT
TTCCAAGGTAAATCAAATTTATACCAAATACTGGAACTTATCAAATAATG
AATAGTCCGCCTGTTCCGGTAAAAACGAGgtaaaaatctaatttaaaaat
cGAGAATATAAATTTCAGTGAGACTCTTGAACGCTAaccaaaataataat
attgaaggCCTCGATGAAGCCTAACTTGTTTGCAAAATATCTCCGAATTT
TATCTgttctgaaaatcaaattttaatcaaatttctcgatttagaaaatc
aaaagatttgaaaaatctagTTTGCGAGCTCCGTTCTTTAGGTCTTCATA
TTTTAACCCGCTGAAATGGAATAAGAGAGCGAAAAACCTTTGATTTTAAA
TCTAAAACGTGAGGTTATCATATTCCGGTATAGAATGTCGAAATGTATCG
GTTGTGAGGTTTTCTCTCCAATAAATTTGAAAGTTGGCTTCCATTCATTG
AGAACGGAAGTTTGTCGATTGTAGGACGTGGAATTAGTAAGACTTTCAAC
GTTaatattcattctttttttcttgcgtTTACCTTATAGTCGAGGGCATT
TTGAAAGATGTTTTGCTGGATAGTACATTTTATTCAAGTTATTTCAAGGT
ACGTATTTTGATACTGTTATCACTGCAGGATTTCACTTTATTTACCTTTA
GGGTGTTTTCAAGCTCGTGTCctatttttgcttggttagcgTCTGTGAAA
ATGAAAGCTCACTTAAAATATGTGAACACCCTTTTtctgaattcttttca
aaaaaaattttaagccaaagtggaagaaaagttattggatttcattttgg
taaaatcgcgatcttaaaatcttgcTTTTGGTCCAGAGTTAtaacaattt
aaattttaaaacagaGTTTGCTTTATGAATTATGTTACTCattaattgtc
tctttcggaaagaACAAAGAGAAAAGACAAGGTCCAGCTTACGTTTATTC
TCACATCTATGGAATAGTAACATTTtgacacattttgctgattaaTCAAT
TAAACAGCAATTGTCTcgctaaaaatttcaaatcgatgtagagaaaaatg
aaattttactataccatactacttttaacgaagttaaagtgtATGAGTGA
CTACTAGCTATCGACTccattcttttttataagattccCGAAAGGTCAAA
CTTAAAAAGCGCATTTGAATTAaccttttggacctaccccggaggtcctt
taatcgttcgttcgttcgttcgtctgttaccagcttttctcgcgATTTTT
TGCATAGAGATGCAAATCGACAGTACCCAAAaggtgacgaagcccgattt
ttgtaaaaaacttttttgggcaaatttagggccgtaaaaatcagattttc
ttaattggggaaattcccttttatcatttttatggaAAATGAGCATTCCT
CGCGACTGCCTTGGTATTTTAcctgattttttgtaaaattgtaaatttta
aaatctgatcgagcccgattttcgaaacaataattatttgggcaaatttg
tccaaaaagtGTCTAAAAATAGGATCATTGCATGAATGATAATGggcaaa
gttctttaaaaagtggCTGAATCAGTTTTTTCGGATAActttttttggcc
gtaaaaatttATTaatcttatttggggaaatttccctttgtcatttttag
ggaaatgagcatttctcgcaACGTCGCAACTGCCTTGGTATTTTGTCTGA
TTTTTTggacaatgatgtaaaatggtaacgtttaagggctctgaccatag
tgaatttttaatatttgccagtggcaaatttttttcattgcaattcttaa
attttcagatttcaagGATAATTGTACGTgacgtacaaaatataaatttc
tacttgatgtagcccacaagacttgacgaagaagaaaatttttgcgaaga
agagtatttcaactttgaagaacttattttcggcgaagaaaaaacaattt
ttcatcccaatttttcatagaaaaacagccataacttttgatacattatt
tagaaaatttttccgaaaaatttaaaacagttcaattctttgcggacagt
atgaaaaaacttcgaaacaaaaaagttaattacccattaaaactttttat
aaaagaaggtaatgcaacatattactaacgtctttttaaagttcatagcg
tcattttcgcaattaaattcttaattactcttaggggatttgattaaaaa
gcaatttaaaaaggcaattctttgttaaagtgttaaagaagctaaaacat
aacttttatgttcaaatactaaagtCATAttttcgactatggtcagagcc
cttaaaatctgatggagcccgattttcaaaagaaaaattttaggcaaatt
tgggtcGAATTCAGATTTGTAGAAGTTGCTTCATTCAATTTTATCTTTAA
TGAGAAAGAGTTATGAAAGAAAGGATCGTTTTTGTTTACTCCTTGGGGCT
ACTTAGCTCTAAAATATCGGAAAGCCGACGTGAAACAAGTTGCATCATGT
TTTCAAGTTTACGCATCTCTATGCTATGCTGTTATCTTTTCCATTTCGTT
CGAACATTTTCATTTAACACGTTTCCGACTACCtatatcaggtaggtcca
ttcagcacgttgcttgttttcaatatttttacaaagattttatcAAGATT
TAACGAGTTAAAGTCAAtgtaaagaaaaatctttttagttcaatctattg
aatttttaaaatggtGTCGTTAAAAATTTTGAGTAGAAACTCTTCCGCAA
TATGACATATCAAAGGCCTTCAGAACATAGTACCGAAATTATTTTTCCAG
AATTTAAAAGCTATGGGCGACTTCACCTTCTTTGAAGTAGGCAatgttga
aattttaaattttaattactGGCTTTCAGAAATACATATTTTGATGtaca
aaaatttgttgttctaaagatatggcCAAGGAAAGAGAATTTGTCATAAA
GGGTGTCCACATACCTTAACACATCCCgtaagcatagtataagaacgccg
cggctggaatgataacatctgaacttCTGTTGATTGAAGTTAGATCGCCG
CCAAAATTCGATCCTTCAAGTCGTCCCGACGTACTAgaagtcgtcccgtc
gcactAGAAGTCCGCAGGTCGCATTAGAAGTCTGCAAGTCGGAATCTTTT
GGAAGTCGAAACATTCCAAAGTTTAAGTCGAGTCGTTGCTTCAGAAGTTG
ACTCGTCGCAAATTTCGGCAGTCGACTCATCCCAAAAAGTTGGACTCTAG
GCTATTCCGAATAAAAAACTTGTTTTgtatatcaaaaatcaaaatattgt
ggAGATAATGTAATGTTCGTGTGGTGTGCAGTTTTTTTTGCACGTGCAGA
GCTCACCCAGGGAAAACTTCAATGTTCAAAATAGAAGCTGGTGGAAACAC
ACGTGTGGAAATTTACTTATTGATTAGAGccatgtcaaaattttgaaaac
aattttgaatttNgaaggaaaataagagaaaaatttcaaaaactatctac
caataataaactgagcatctcgatgttcttataaagcttgGAGACAGAGA
TAGAGCAGCAATTAACTGAGAAGACAAtgtggtacatattccagccgcga
cATTCTNTAAACGTACATGATTGGAACATGTACCAAGTTCCGACGAGTTA
ACTTCTGATAGGAACCACTAAAAACTTGGTATGGCTTGACTTAAAAGAAA
TACGACCTGTGAACTTATAGTGCGACGGGAGGACTTGAAACTTGGGATGA
TTCGACTACCGAAAACTGCGACGGGACGACTTCTagtacgacgggacgac
ttgaaggattgaattttggcggcgatctaacttcatactgttgttctatc
tctgtcgtatttgatgacatttttttatcaagagatcagtaatgtagcat
ctttaatggtaaattttattggtttgtcgttaatacttacttctcagtgt
gtTTTAGATATTAATTatacccttgataatacacttgcattgtAAAATCA
ttatcaacaataagaaatttaaaataaacaaagtgcctcgaatgccttcg
caatatttcaNtacatattccagccgctgCATTCCTATACTATGCCGTGA
GTATATTTTTCCAGATATACTGTTGGCAAGAGAGCCAGACCTATACACCC
CTTCTCAAAACGTTATGAAGTGTAGCAATTACTATTtacgttgaaaaaaa
aaagtttattcttCATTTCTGAAGCATTCTTTGTCATTTTGAAGTGATAT
AGGGAACTCTCAAAAGTCATTACGCGTAAAATCATTTCCATTTCGAGATT
TCCTAGCCAATCAAAATACGAGCACAGAAAGCTGTACTAGGTCTCTCCTG
GCAACAAATTCCGTAGCTGAAGCCATCGCCatcatatataaaaaaacagA
AGGTTTGGATTCAGCAAACGGGTTTTTGTCGCCAGTTTTCTGAACTAATT
TTTCAATTGGTTCTATAGTTGGAGACGTACCACCACAGCAAGGTGATGGT
GATGTTGTTGGATTTCTACGATCATGGTTTTCGCTTCAGTGAATCCGTTC
GCAAGAAGATCGAAGTTGATTCCAAAAACCATTTGGATCATATCCATGAT
ATCCAGAAAGCTTTCTTTCAACATAAAGTGAAATTGTGTTCCGCTTTCGC
GAGGAATCGCATCAAAGCGTGCGCTCTCTCCTTGGACGCCATGTTGCCGG
CTGAAGTGAAGGAACGTAACGAACATGGCTCGCGTCATTCTTTGTTCACG
TGGATCAACCCTTTTGTGGCTGACGCACATTGTATCATCAATCAGCTGAA
GAGCGATGGTTTCGTTTACAAAGAATCTTTAGAAGAATTGAGTGGATCGG
AAGATAACGGACTTTATTTCTCTTATGAAGAAGATGGTGCAAACACTGAC
TTGTTGGAGTTTCCTGCATGGTGTAAAGATGAAGTGTACAACCATCAATT
AGCATTGGATTCGTCTCTTGTTCCAATGGTAAGCACCTTCTTCCacacca
tttttcatttttgatccAAAATAACATGTTGTAAGAAATTCCACTGAACC
TCTCTACTTTTTCGCATGATTGCTCTCCTCCTCTCGTGTAAAAGAAGTAG
TTTTGAATTATGCACATGTTTACAATACTGAGGGACCATTCCATTGGACC
CGTGACAACAATTTGTACTGTGGAATTTTTTATCGTTTAAAGAAAGTTTA
TTATATTTGGAGACCTTTGGAGTTGAGTATGCGAATAAGAGATGTCAAAA
TGTATCATTATCATGGCCAGATCACTGACGTTACAGGCAAAGCTGCAAGG
GAAAGTGCGTAAAAATCATCAATTTCCAAAAGTCGAATTTAACAAAAAGG
ACTAATACTTCAGTTAGATCATTAAATTCTGATATGACCAAAATTAGTAT
ACTACAACTCTCTCGAACATACAATGACATAAGCACATTTTAAGCTCGAA
ATTCTGTCTGGTCCAGTTCAGTTCTGTCTACCAATAGAAAACTCACCATA
TGTGTTGCTCGTAACAAATAAATGCTTCGATAATCTTTCGATATCTTCTC
CAGAGTAAACCACGTTACCTGATGACAAAGGCGTGTCGGCGTGCACACGA
TGAAGTGTGTCGAGTGCAACAGAAATCGCATCATCACGCTGTTCTCCCGG
CAACCGATGGCAAGGAGAATCATGATATGGTGAACGGTGGTTGTGATGTC
GTCCTCACTCATCCTGAAACTGGTATCTTTCTTTCTCTAAaaggctacac
gttttttataagaacataaggcttcgatggccaaaatttgaagaacaagt
taaggtctctgaccatagtgaatttttaatatttgtcacttacaaaatat
aaagttctacttgatgtagcacacaaaactgtggcatgttatacattttc
tgttaggccaattatccgtgagtctgaaaatttaagaatcgcaatgaaaa
aatttgataaagaagaaaatgaagactttcgcgaagaagagtatttcaac
tttgaaaagcttagtttcggcgaagaaaaaacattttgaaaaattatttg
caGTAGATGGTttatcttttatcgaactaaaattattttttcggaatttt
tttctaaaagcttatttgcttcaaaatcttgaaaatagtgctttttgacc
aattttccatcccaatttttcatagaaaaacagccataacttttgatgcg
ttaatttagaaaatttttccgaaaaatctaaaacagttcaattctttgcg
gggcagtttgaaaaaacttcgaaacaaaaaggttaattacccattaaaac
ttaaaactttttataaaagaaagtgaTGCAACATATAATTAACGTctctt
taaagttcataacgtcatttttgcaattaaattcttaattactcttaagg
gatttgattaaaaagcaatttataaaagcaatatttgtcaaaagtgttaa
aaacctaaaacataacttttgtGTTCAAAtacttaaatcaatttttcgag
TATGGTCCGAGCCCTTAaggacattttaaggctttatggactctaaaaca
cccgacttttttggaaaatggtcaaaaaagctcaaaaagtgTCTAAAAAT
CTACTTGATGCCATCATCGAATTCGTTAAACATCAAAAGAGCATCCAAAG
AAAATAATCATCTTCTATATTTTCATTCTTCAGGATCGTTGGCGGCATAC
TTATGTTCCTTCCTTGGCACCAACAAACGTCTCTTTATCTTTGGTTGTCA
TGGTGACAAAGCGGTAGAGGtcgagaaaaatttgaaaaatattggaatat
caAGTATCCTTTCACCTAGTGTTTTCCAATACTTTTTATTgcctttattt
tttgaaaattaactcGTAGTTATTCAAGGTCTTATCCTTTGTTCGCTTTC
AGATAGATATCACGGACCTTAACAGTTCAAAATAGATTATGTTTTGTTGA
GTGAAGATTTCAAGAACATCGTGGGGATCGATGACCGGCTTTCATCCGTT
AAACTGATCGTTTGTAACCCACCCTGTTCCAATAGCGGTGTAGTGAACAT
GGTGGACTTTATCATACAGGAAGGAGCAGACACAGCCAGCAGTCTGTCTA
AAGAAGCCACTCCAGTCAAGATCAGAGGTCTAGCGGAAGAACAAGCCTCT
ACCATCAGGATTACTTTCTCTTTCCCAAATGTCCAATCCATTGTTTACTG
TTCCTTTTCAACTTTCCCTGAAGAAAATGAGAAATTGGTGCAACGCGTTT
TGCAGAGTCAGCAAAATTCCAAGAATCGTTTCGAGATGTGTGTCGTCTTG
GAAGATATGAGAGACATTTTCACCTCTAGCCAAGGTAAATGCTTTGTAAT
TGACTTAAATAATAAGATTTAAAAGCTATTTGAAGACAAAGACAAAGTTG
AACTCATCATTAATTTTAAAGCTCGAGGGGTTCAAACTggaaactcctgg
atgggaaaggaagccacttatttcccatccaaaacgcgtgacccgtatgg
ttttcacacaaacgccagattggaAGTAAAAGCTATCGCAAGATTTCGAA
ACACGCcgcttaaaaacaaagaaagagctAGATCTAATCTGTCATTCTCA
ATGCggcgcaaatcttaaggcttcacttttacTTGCTTGATAAAGGTTAC
AGATTCATCTCTAaccccttcggggctttaaactcaatggaacTCATCCT
CCCTTTTTACAGGAAGTGTATCAAAtgtgctttctttctttttgctaGAT
GGGGATTTCTTGAGAGTGGAACCTTCGTACAAAATGGATGGTTTCTTTGT
CACTTTGTTGAAACGAAAGGTTTGCTTTTCGATATTATTCTTTCTTAGTT
ATTTGAACTATTAAACCTTCTGATCAAAGAAATAACCAAGTTGATTTTTG
ACAGTACAGTGCTTATTGTCATTGTGATATTTGGATTTCTTTAATGTTAT
ATGCGAATTTCTTTGAGAGTCCTGTCATTTACACACTTCACTCGTTCTGC
AGATCAAGGAGGATTCAGTGAGTGAAGTGATGGAGCGAGCGGCCAAGAAA
GGTTTATTAAAGAAATCGAGCGGTAAGAAAGAGAAGAGGAAGGGCGTTCC
CAAAGATCAACCGCCCCACGTCGCCAATCGGTTGTCGGTTGTTGATAAGA
AGAAGGCGGGGAGAAGCTCACCTAAACCACAAAAGAAACTGGAAAGACGA
GACACTGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040357XLOC_040357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064362-exon-scaffold_412-1491911889:20747..21733TCONS_00064362-exon-scaffold_412-1491911889:20747..21733Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:20747..21733TCONS_00064362-exon-scaffold_412-1510915933:20747..21733Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:20747..21733TCONS_00064362-exon-scaffold_412-1575043694:20747..21733Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1491911889:22331..22389TCONS_00064362-exon-scaffold_412-1491911889:22331..22389Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:22331..22389TCONS_00064362-exon-scaffold_412-1510915933:22331..22389Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:22331..22389TCONS_00064362-exon-scaffold_412-1575043694:22331..22389Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1491911889:28415..28924TCONS_00064362-exon-scaffold_412-1491911889:28415..28924Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:28415..28924TCONS_00064362-exon-scaffold_412-1510915933:28415..28924Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:28415..28924TCONS_00064362-exon-scaffold_412-1575043694:28415..28924Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1491911889:29500..29668TCONS_00064362-exon-scaffold_412-1491911889:29500..29668Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:29500..29668TCONS_00064362-exon-scaffold_412-1510915933:29500..29668Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:29500..29668TCONS_00064362-exon-scaffold_412-1575043694:29500..29668Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1491911889:30630..30749TCONS_00064362-exon-scaffold_412-1491911889:30630..30749Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:30630..30749TCONS_00064362-exon-scaffold_412-1510915933:30630..30749Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:30630..30749TCONS_00064362-exon-scaffold_412-1575043694:30630..30749Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1491911889:30882..31280TCONS_00064362-exon-scaffold_412-1491911889:30882..31280Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:30882..31280TCONS_00064362-exon-scaffold_412-1510915933:30882..31280Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:30882..31280TCONS_00064362-exon-scaffold_412-1575043694:30882..31280Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1491911889:31695..31765TCONS_00064362-exon-scaffold_412-1491911889:31695..31765Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:31695..31765TCONS_00064362-exon-scaffold_412-1510915933:31695..31765Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:31695..31765TCONS_00064362-exon-scaffold_412-1575043694:31695..31765Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1491911889:31949..32156TCONS_00064362-exon-scaffold_412-1491911889:31949..32156Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1510915933:31949..32156TCONS_00064362-exon-scaffold_412-1510915933:31949..32156Clytia hemisphaericaexon
TCONS_00064362-exon-scaffold_412-1575043694:31949..32156TCONS_00064362-exon-scaffold_412-1575043694:31949..32156Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_412supercontigscaffold_412:20747..32156 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.597125	0.640894	6.66589e-08	0.211022	0.186931	2.08672e-07	1.28609	2.05307	0.975845	1.69059	1.48828	1.91737	3.63203e-08	3.00295e-09	0.263738	1.30859e-08	1.28121e-08	0.0999902	0	0.137961	5.03666e-08	0	4.79218e-08	1.56928e-08	2.72608e-07	0.589795	1.37762e-07	2.71846	2.09711	2.67588
Blast
[Close]
BLAST of TCONS_00064362 vs. Swiss-Prot (Human)
Match: NSUN7 (Putative methyltransferase NSUN7 OS=Homo sapiens GN=NSUN7 PE=2 SV=4)

HSP 1 Score: 160.229 bits (404), Expect = 1.202e-40
Identity = 149/543 (27.44%), Postives = 253/543 (46.59%), Query Frame = 3 
Query:  774 NKREGEILDDNSKRPISREERA-----QIKFGHTIYNKAANLFELLKDNTVVQP---KIG---------FENEFEKRRAYSLAFAAKRFEGILKDVLLDSTFYSSYFKLETYHHSKVMVMLLDFYDHGFRFSESVRKKIEVDSKNHLDHIHDIQKAFFQHKVKLCSAFARNRIKACALSLDAMLPAEVKERNEHGSRHSLFTWINPFVADAHCIINQLKSDGFVYKESLEELSGSEDNGLYFSYEEDGANTDLLEFPAWCKDEVYNHQLALDSSLVPMSKPRYLMTKACRRAHDEVCRVQQKSHHHAVLPATDGKENHDMVNGGCDVVLTHPETGSLAAYLCSFLGTNKRLFIFGCHGDKAVEVEKNLKN----IGISNYVLLSEDFKNIVGIDDRLSSVKLIVCNPPCSNSGVVNMVDFIIQEGADT--ASSLSKEATPV-KIRGLAEEQASTIRITFSFPNVQSIVYCSFSTFPEENEKLVQRVLQSQQ--NSKNRFEM---CVVLEDMRDIFTSSQDGDFLRVEPSYKMDGFFVTLLKRK 2315
            N+ + EI+   +  P+S  + +     +  +  ++Y  AAN+F+ ++     Q    K G          E++  +R +Y LAF+A +++ IL+ +L+DS  + S   +  +  S ++VML DF D  F+       ++  D++  +  + +++      K+KL +A AR RIK  ALS+  +LP  V+++    S   L+ WIN        + N LK  G+   +S+  +    D+ +   +  D    D+L FP+  K+++ N  L  D  L+   K R L                     H+V    +  ++  MVN G    ++H           S L  N    +F C G ++   + +LK     IG  N  +L E F NI   D RL  VK+I+  P CS  GV N V+FI+ E  DT      S+    V K+  LA++Q   +     F   Q++VYC+ S FPEENE +V++ L+ Q   N    + +    + L  +++I  S+    F R+EPS   +G F+++L R+
Sbjct:   12 NEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIEKSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPST-TIPDHLSSLIIVMLYDFQDRKFQ------TRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHI----DDKV---FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAV-------------------HSVKALLNMDDDVLMVNTGSWYTVSH----------MSILTNNNTSKVFVC-GVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESKDHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYEQLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYRLSPPVLPLCSLKEIQLSTD--KFFRMEPSEITNGCFLSILTRE 508
The following BLAST results are available for this feature:
BLAST of TCONS_00064362 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NSUN71.202e-4027.44Putative methyltransferase NSUN7 OS=Homo sapiens G... [more]
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