TCONS_00064360 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064360
Unique NameTCONS_00064360
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2237

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064360 ID=TCONS_00064360|Name=TCONS_00064360|organism=Clytia hemisphaerica|type=transcript|length=2237bp
gcttttatgaTGCATTAAAAAACTTATACCTATAACTTAGGACATTTTGG
AAggcaaaaaaattctttgtcgCCCAACTATGATAGTGACATTCAAAACC
CCTgaattgaaattctattgttcagaCCAAAACGGTGGAAaggaaaagtg
cttggaaaatGCCCTGCTTGGATAACCAGAGAGTGCAAACGATTACCTCA
ACGCAAGGAACCTCTCTACAAGTGGGCTAAGCATGCAAATATGGGATGCA
GTGACCACGCACTGACCACGAAAAGAATGTCTgagtttttctgaattttt
atcGAATCGAATATTTTGGACGTGACAAACAGACGATAGAAGGAAAATGG
CTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTCTTGTTAACA
CCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATCCTCCCGAAA
AGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATAAGAGAGAGG
GGGAAATACTTGACGATAACAGTAAAAGACCCATCTCGCGAGAAGAAAGA
GCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGCCAATCTTTT
CGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCGGGTTTGAAA
ATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAAGA
TTCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTATTCAAG
TTATTTCAAGTTGGAGACGTACCACCACAGCAAGGTGATGGTGATGTTGT
TGGATTTCTACGATCATGGTTTTCGCTTCAGTGAATCCGTTCGCAAGAAG
ATCGAAGTTGATTCCAAAAACCATTTGGATCATATCCATGATATCCAGAA
AGCTTTCTTTCAACATAAAGTGAAATTGTGTTCCGCTTTCGCGAGGAATC
GCATCAAAGCGTGCGCTCTCTCCTTGGACGCCATGTTGCCGGCTGAAGTG
AAGGAACGTAACGAACATGGCTCGCGTCATTCTTTGTTCACGTGGATCAA
CCCTTTTGTGGCTGACGCACATTGTATCATCAATCAGCTGAAGAGCGATG
GTTTCGTTTACAAAGAATCTTTAGAAGAATTGAGTGGATCGGAAGATAAC
GGACTTTATTTCTCTTATGAAGAAGATGGTGCAAACACTGACTTGTTGGA
GTTTCCTGCATGGTGTAAAGATGAAGTGTACAACCATCAATTAGCATTGG
ATTCGTCTCTTGTTCCAATGAGTAAACCACGTTACCTGATGACAAAGGCG
TGTCGGCGTGCACACGATGAAGTGTGTCGAGTGCAACAGAAATCGCATCA
TCACGCTGTTCTCCCGGCAACCGATGGCAAGGAGAATCATGATATGGTGA
ACGGTGGTTGTGATGTCGTCCTCACTCATCCTGAAACTGGATCGTTGGCG
GCATACTTATGTTCCTTCCTTGGCACCAACAAACGTCTCTTTATCTTTGG
TTGTCATGGTGACAAAGCGGTAGAGGtcgagaaaaatttgaaaaatattg
gaatatcaAATTATGTTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGG
ATCGATGACCGGCTTTCATCCGTTAAACTGATCGTTTGTAACCCACCCTG
TTCCAATAGCGGTGTAGTGAACATGGTGGACTTTATCATACAGGAAGGAG
CAGACACAGCCAGCAGTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGA
GGTCTAGCGGAAGAACAAGCCTCTACCATCAGGATTACTTTCTCTTTCCC
AAATGTCCAATCCATTGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAA
ATGAGAAATTGGTGCAACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAAT
CGTTTCGAGATGTGTGTCGTCTTGGAAGATATGAGAGACATTTTCACCTC
TAGCCAAGATGGGGATTTCTTGAGAGTGGAACCTTCGTACAAAATGGATG
GTTTCTTTGTCACTTTGTTGAAACGAAAGATCAAGGAGGATTCAGTGAGT
GAAGTGATGGAGCGAGCGGCCAAGAAAGGTTTATTAAAGAAATCGAGCGG
TAAGAAAGAGAAGAGGAAGGGCGTTCCCAAAGATCAACCGCCCCACGTCG
CCAATCGGTTGTCGGTTGTTGATAAGAAGAAGGCGGGGAGAAGCTCACCT
AAACCACAAAAGAAACTGGAAAGACGAGACACTGANN
Run BLAST on NCBI

transcript from alignment at scaffold_412:20731..32156+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064360 ID=TCONS_00064360|Name=TCONS_00064360|organism=Clytia hemisphaerica|type=transcript|length=11426bp|location=Sequence derived from alignment at scaffold_412:20731..32156+ (Clytia hemisphaerica)
gcttttatgaTGCATTAAAAAACTTATACCTATAACTTAGGACATTTTGG AAggcaaaaaaattctttgtcgCCCAACTATGATAGTGACATTCAAAACC CCTgaattgaaattctattgttcagaCCAAAACGGTGGAAaggaaaagtg cttggaaaatGCCCTGCTTGGATAACCAGAGAGTGCAAACGATTACCTCA ACGCAAGGAACCTCTCTACAAGTGGGCTAAGCATGCAAATATGGGATGCA GTGACCACGCACTGACCACGAAAAGAATGTCTgagtttttctgaattttt atcGAATCGAATATTTTGGACGTACGTGATTTCCAATCAGCATTTatcat tcatttttattttgatccTGCCAAACACTGAAATTCCAATATCTCCTTCA TCTATAATTAATAGATGAAGAAAAGGACGGAACTTAAAAATATCTGAAAG AATAATTAAGAAAAAATATCCCCATTTACTGATATTATATCTCCATTGTG GATCGAGAAAGGATGTTTTTATATCCTTTTGTTTTATATTCATGTCAAAA TCTCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCATATTctg ctttcatttttcttttcactcAGGTGACAAACAGACGATAGAAGGAAAAT GGCTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTCTTGTTAA CACCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATCCTCCCGA AAAGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATAAGAGAGA GGGGGAAATACTTGACGATAACAGTAAAAGACCCATCTCGCGAGAAGAAA GAGCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGCCAATCTT TTCGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCGGGTTTGA AAATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCTGCTAAAA GATGTAAGTGACTTTCTCCTCTTTTGAGTTTTATGAGTTTAGTTAACAGT TGATGCCCGCTTTCCAAGGTAAATCAAATTTATACCAAATACTGGAACTT ATCAAATAATGAATAGTCCGCCTGTTCCGGTAAAAACGAGgtaaaaatct aatttaaaaatcGAGAATATAAATTTCAGTGAGACTCTTGAACGCTAacc aaaataataatattgaaggCCTCGATGAAGCCTAACTTGTTTGCAAAATA TCTCCGAATTTTATCTgttctgaaaatcaaattttaatcaaatttctcga tttagaaaatcaaaagatttgaaaaatctagTTTGCGAGCTCCGTTCTTT AGGTCTTCATATTTTAACCCGCTGAAATGGAATAAGAGAGCGAAAAACCT TTGATTTTAAATCTAAAACGTGAGGTTATCATATTCCGGTATAGAATGTC GAAATGTATCGGTTGTGAGGTTTTCTCTCCAATAAATTTGAAAGTTGGCT TCCATTCATTGAGAACGGAAGTTTGTCGATTGTAGGACGTGGAATTAGTA AGACTTTCAACGTTaatattcattctttttttcttgcgtTTACCTTATAG TCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTATTCAAGT TATTTCAAGGTACGTATTTTGATACTGTTATCACTGCAGGATTTCACTTT ATTTACCTTTAGGGTGTTTTCAAGCTCGTGTCctatttttgcttggttag cgTCTGTGAAAATGAAAGCTCACTTAAAATATGTGAACACCCTTTTtctg aattcttttcaaaaaaaattttaagccaaagtggaagaaaagttattgga tttcattttggtaaaatcgcgatcttaaaatcttgcTTTTGGTCCAGAGT TAtaacaatttaaattttaaaacagaGTTTGCTTTATGAATTATGTTACT CattaattgtctctttcggaaagaACAAAGAGAAAAGACAAGGTCCAGCT TACGTTTATTCTCACATCTATGGAATAGTAACATTTtgacacattttgct gattaaTCAATTAAACAGCAATTGTCTcgctaaaaatttcaaatcgatgt agagaaaattgaaattttactataccatactacttttaacgaagttaaag tgtATGAGTGACTACTAGCTATCGACTccattcttttttataagattccC GAAAGGTCAAACTTAAAAAGCGCATTTGAATTAaccttttggacctaccc cggaggtcctttaatcgttcgttcgttcgtctgttaccagcttttctcgc gATTTTTTGCATAGAGATGCAAATCGACAGTACCCAAAaggtgacgaagc ccgatttttgtaaaaaacttttttgggcaaatttagggccgtaaaaatca gattttcttaATTGGGGAAATTcacttttatcatttttagggaNTCTGAA TTTTTATCGAATCGAATATTTTGGACGTACGTGATTTCCAATCAGCATTT atcattcatttttattttgatccTGCCAAACACTGAAATTCCAATATCTC CTTCATCTATAATTAATAGATGAAGAAAAGGACGGAACTTAAAAATATCT GAAAGAATAATTAAGAAAAAATATCCCCATTTACTGATATTATATCTCCA TTGTGGATCGAGAAAGGATGTTTTTATATCCTTTTGTTTTATATTCATGT CAAAATCTCACAGTCAAACGTGAAGGCGGATAAGCTCCACGATTTCCATA TTctgctttcatttttcttttcaccCAGGTGACAAACAGACGATAGAAGG AAAATGGCTACAAAGAGTAGTAAGGCGAGAGACCCAAACATCAAACTCTT GTTAACACCTGAAGCTGAGCGAAAGAAACTGGAATCACGTAAAGGATCCT CCCGAAAAGAAAGAAGGAGGCCTTCTTTGACCGATCACAATCGAAATAAG AGAGAGGGGGAAATACTGGACGATAACAGTAAAAGACCCATCTCGCGAGA AGAAAGAGCACAGATCAAGTTTGGACATACCATTTACAATAAAGCTGCCA ATCTTTTCGAATTGCTGAAAGACAACACCGTCGTCCAACCGAAAATCGAG TTTGAAAATGAATTCGAAAAACGAAGAGCCTATAGTTTAGCATTTGCTGC TAAAAGATGTAAGTGACTTTCTCCTCTTTTGAGTTTTATGAGTTTAGTTA ACAGTTGATGCCCGCTTTCCAAGGTAAATCAAATTTATACCAAATACTGG AACTTATCAAATAATGAATAGTCCGCCTGTTCCGGTAAAAACGAGgtaaa aatctaatttaaaaatcGAGAATATAAATTTCAGTGAGACTCTTGAACGC TAaccaaaataataatattgaaggCCTCGATGAAGCCTAACTTGTTTGCA AAATATCTCCGAATTTTATCTgttctgaaaatcaaattttaatcaaattt ctcgatttagaaaatcaaaagatttgaaaaatctagTTTGCGAGCTCCGT TCTTTAGGTCTTCATATTTTAACCCGCTGAAATGGAATAAGAGAGCGAAA AACCTTTGATTTTAAATCTAAAACGTGAGGTTATCATATTCCGGTATAGA ATGTCGAAATGTATCGGTTGTGAGGTTTTCTCTCCAATAAATTTGAAAGT TGGCTTCCATTCATTGAGAACGGAAGTTTGTCGATTGTAGGACGTGGAAT TAGTAAGACTTTCAACGTTaatattcattctttttttcttgcgtTTACCT TATAGTCGAGGGCATTTTGAAAGATGTTTTGCTGGATAGTACATTTTATT CAAGTTATTTCAAGGTACGTATTTTGATACTGTTATCACTGCAGGATTTC ACTTTATTTACCTTTAGGGTGTTTTCAAGCTCGTGTCctatttttgcttg gttagcgTCTGTGAAAATGAAAGCTCACTTAAAATATGTGAACACCCTTT Ttctgaattcttttcaaaaaaaattttaagccaaagtggaagaaaagtta ttggatttcattttggtaaaatcgcgatcttaaaatcttgcTTTTGGTCC AGAGTTAtaacaatttaaattttaaaacagaGTTTGCTTTATGAATTATG TTACTCattaattgtctctttcggaaagaACAAAGAGAAAAGACAAGGTC CAGCTTACGTTTATTCTCACATCTATGGAATAGTAACATTTtgacacatt ttgctgattaaTCAATTAAACAGCAATTGTCTcgctaaaaatttcaaatc gatgtagagaaaaatgaaattttactataccatactacttttaacgaagt taaagtgtATGAGTGACTACTAGCTATCGACTccattcttttttataaga ttccCGAAAGGTCAAACTTAAAAAGCGCATTTGAATTAaccttttggacc taccccggaggtcctttaatcgttcgttcgttcgttcgtctgttaccagc ttttctcgcgATTTTTTGCATAGAGATGCAAATCGACAGTACCCAAAagg tgacgaagcccgatttttgtaaaaaacttttttgggcaaatttagggccg taaaaatcagattttcttaattggggaaattcccttttatcatttttatg gaAAATGAGCATTCCTCGCGACTGCCTTGGTATTTTAcctgattttttgt aaaattgtaaattttaaaatctgatcgagcccgattttcgaaacaataat tatttgggcaaatttgtccaaaaagtGTCTAAAAATAGGATCATTGCATG AATGATAATGggcaaagttctttaaaaagtggCTGAATCAGTTTTTTCGG ATAActttttttggccgtaaaaatttATTaatcttatttggggaaatttc cctttgtcatttttagggaaatgagcatttctcgcaACGTCGCAACTGCC TTGGTATTTTGTCTGATTTTTTggacaatgatgtaaaatggtaacgttta agggctctgaccatagtgaatttttaatatttgccagtggcaaatttttt tcattgcaattcttaaattttcagatttcaagGATAATTGTACGTgacgt acaaaatataaatttctacttgatgtagcccacaagacttgacgaagaag aaaatttttgcgaagaagagtatttcaactttgaagaacttattttcggc gaagaaaaaacaatttttcatcccaatttttcatagaaaaacagccataa cttttgatacattatttagaaaatttttccgaaaaatttaaaacagttca attctttgcggacagtatgaaaaaacttcgaaacaaaaaagttaattacc cattaaaactttttataaaagaaggtaatgcaacatattactaacgtctt tttaaagttcatagcgtcattttcgcaattaaattcttaattactcttag gggatttgattaaaaagcaatttaaaaaggcaattctttgttaaagtgtt aaagaagctaaaacataacttttatgttcaaatactaaagtCATAttttc gactatggtcagagcccttaaaatctgatggagcccgattttcaaaagaa aaattttaggcaaatttgggtcGAATTCAGATTTGTAGAAGTTGCTTCAT TCAATTTTATCTTTAATGAGAAAGAGTTATGAAAGAAAGGATCGTTTTTG TTTACTCCTTGGGGCTACTTAGCTCTAAAATATCGGAAAGCCGACGTGAA ACAAGTTGCATCATGTTTTCAAGTTTACGCATCTCTATGCTATGCTGTTA TCTTTTCCATTTCGTTCGAACATTTTCATTTAACACGTTTCCGACTACCt atatcaggtaggtccattcagcacgttgcttgttttcaatatttttacaa agattttatcAAGATTTAACGAGTTAAAGTCAAtgtaaagaaaaatcttt ttagttcaatctattgaatttttaaaatggtGTCGTTAAAAATTTTGAGT AGAAACTCTTCCGCAATATGACATATCAAAGGCCTTCAGAACATAGTACC GAAATTATTTTTCCAGAATTTAAAAGCTATGGGCGACTTCACCTTCTTTG AAGTAGGCAatgttgaaattttaaattttaattactGGCTTTCAGAAATA CATATTTTGATGtacaaaaatttgttgttctaaagatatggcCAAGGAAA GAGAATTTGTCATAAAGGGTGTCCACATACCTTAACACATCCCgtaagca tagtataagaacgccgcggctggaatgataacatctgaacttCTGTTGAT TGAAGTTAGATCGCCGCCAAAATTCGATCCTTCAAGTCGTCCCGACGTAC TAgaagtcgtcccgtcgcactAGAAGTCCGCAGGTCGCATTAGAAGTCTG CAAGTCGGAATCTTTTGGAAGTCGAAACATTCCAAAGTTTAAGTCGAGTC GTTGCTTCAGAAGTTGACTCGTCGCAAATTTCGGCAGTCGACTCATCCCA AAAAGTTGGACTCTAGGCTATTCCGAATAAAAAACTTGTTTTgtatatca aaaatcaaaatattgtggAGATAATGTAATGTTCGTGTGGTGTGCAGTTT TTTTTGCACGTGCAGAGCTCACCCAGGGAAAACTTCAATGTTCAAAATAG AAGCTGGTGGAAACACACGTGTGGAAATTTACTTATTGATTAGAGccatg tcaaaattttgaaaacaattttgaatttNgaaggaaaataagagaaaaat ttcaaaaactatctaccaataataaactgagcatctcgatgttcttataa agcttgGAGACAGAGATAGAGCAGCAATTAACTGAGAAGACAAtgtggta catattccagccgcgacATTCTNTAAACGTACATGATTGGAACATGTACC AAGTTCCGACGAGTTAACTTCTGATAGGAACCACTAAAAACTTGGTATGG CTTGACTTAAAAGAAATACGACCTGTGAACTTATAGTGCGACGGGAGGAC TTGAAACTTGGGATGATTCGACTACCGAAAACTGCGACGGGACGACTTCT agtacgacgggacgacttgaaggattgaattttggcggcgatctaacttc atactgttgttctatctctgtcgtatttgatgacatttttttatcaagag atcagtaatgtagcatctttaatggtaaattttattggtttgtcgttaat acttacttctcagtgtgtTTTAGATATTAATTatacccttgataatacac ttgcattgtAAAATCAttatcaacaataagaaatttaaaataaacaaagt gcctcgaatgccttcgcaatatttcaNtacatattccagccgctgCATTC CTATACTATGCCGTGAGTATATTTTTCCAGATATACTGTTGGCAAGAGAG CCAGACCTATACACCCCTTCTCAAAACGTTATGAAGTGTAGCAATTACTA TTtacgttgaaaaaaaaaagtttattcttCATTTCTGAAGCATTCTTTGT CATTTTGAAGTGATATAGGGAACTCTCAAAAGTCATTACGCGTAAAATCA TTTCCATTTCGAGATTTCCTAGCCAATCAAAATACGAGCACAGAAAGCTG TACTAGGTCTCTCCTGGCAACAAATTCCGTAGCTGAAGCCATCGCCatca tatataaaaaaacagAAGGTTTGGATTCAGCAAACGGGTTTTTGTCGCCA GTTTTCTGAACTAATTTTTCAATTGGTTCTATAGTTGGAGACGTACCACC ACAGCAAGGTGATGGTGATGTTGTTGGATTTCTACGATCATGGTTTTCGC TTCAGTGAATCCGTTCGCAAGAAGATCGAAGTTGATTCCAAAAACCATTT GGATCATATCCATGATATCCAGAAAGCTTTCTTTCAACATAAAGTGAAAT TGTGTTCCGCTTTCGCGAGGAATCGCATCAAAGCGTGCGCTCTCTCCTTG GACGCCATGTTGCCGGCTGAAGTGAAGGAACGTAACGAACATGGCTCGCG TCATTCTTTGTTCACGTGGATCAACCCTTTTGTGGCTGACGCACATTGTA TCATCAATCAGCTGAAGAGCGATGGTTTCGTTTACAAAGAATCTTTAGAA GAATTGAGTGGATCGGAAGATAACGGACTTTATTTCTCTTATGAAGAAGA TGGTGCAAACACTGACTTGTTGGAGTTTCCTGCATGGTGTAAAGATGAAG TGTACAACCATCAATTAGCATTGGATTCGTCTCTTGTTCCAATGGTAAGC ACCTTCTTCCacaccatttttcatttttgatccAAAATAACATGTTGTAA GAAATTCCACTGAACCTCTCTACTTTTTCGCATGATTGCTCTCCTCCTCT CGTGTAAAAGAAGTAGTTTTGAATTATGCACATGTTTACAATACTGAGGG ACCATTCCATTGGACCCGTGACAACAATTTGTACTGTGGAATTTTTTATC GTTTAAAGAAAGTTTATTATATTTGGAGACCTTTGGAGTTGAGTATGCGA ATAAGAGATGTCAAAATGTATCATTATCATGGCCAGATCACTGACGTTAC AGGCAAAGCTGCAAGGGAAAGTGCGTAAAAATCATCAATTTCCAAAAGTC GAATTTAACAAAAAGGACTAATACTTCAGTTAGATCATTAAATTCTGATA TGACCAAAATTAGTATACTACAACTCTCTCGAACATACAATGACATAAGC ACATTTTAAGCTCGAAATTCTGTCTGGTCCAGTTCAGTTCTGTCTACCAA TAGAAAACTCACCATATGTGTTGCTCGTAACAAATAAATGCTTCGATAAT CTTTCGATATCTTCTCCAGAGTAAACCACGTTACCTGATGACAAAGGCGT GTCGGCGTGCACACGATGAAGTGTGTCGAGTGCAACAGAAATCGCATCAT CACGCTGTTCTCCCGGCAACCGATGGCAAGGAGAATCATGATATGGTGAA CGGTGGTTGTGATGTCGTCCTCACTCATCCTGAAACTGGTATCTTTCTTT CTCTAAaaggctacacgttttttataagaacataaggcttcgatggccaa aatttgaagaacaagttaaggtctctgaccatagtgaatttttaatattt gtcacttacaaaatataaagttctacttgatgtagcacacaaaactgtgg catgttatacattttctgttaggccaattatccgtgagtctgaaaattta agaatcgcaatgaaaaaatttgataaagaagaaaatgaagactttcgcga agaagagtatttcaactttgaaaagcttagtttcggcgaagaaaaaacat tttgaaaaattatttgcaGTAGATGGTttatcttttatcgaactaaaatt attttttcggaatttttttctaaaagcttatttgcttcaaaatcttgaaa atagtgctttttgaccaattttccatcccaatttttcatagaaaaacagc cataacttttgatgcgttaatttagaaaatttttccgaaaaatctaaaac agttcaattctttgcggggcagtttgaaaaaacttcgaaacaaaaaggtt aattacccattaaaacttaaaactttttataaaagaaagtgaTGCAACAT ATAATTAACGTctctttaaagttcataacgtcatttttgcaattaaattc ttaattactcttaagggatttgattaaaaagcaatttataaaagcaatat ttgtcaaaagtgttaaaaacctaaaacataacttttgtGTTCAAAtactt aaatcaatttttcgagTATGGTCCGAGCCCTTAaggacattttaaggctt tatggactctaaaacacccgacttttttggaaaatggtcaaaaaagctca aaaagtgTCTAAAAATCTACTTGATGCCATCATCGAATTCGTTAAACATC AAAAGAGCATCCAAAGAAAATAATCATCTTCTATATTTTCATTCTTCAGG ATCGTTGGCGGCATACTTATGTTCCTTCCTTGGCACCAACAAACGTCTCT TTATCTTTGGTTGTCATGGTGACAAAGCGGTAGAGGtcgagaaaaatttg aaaaatattggaatatcaAGTATCCTTTCACCTAGTGTTTTCCAATACTT TTTATTgcctttattttttgaaaattaactcGTAGTTATTCAAGGTCTTA TCCTTTGTTCGCTTTCAGATAGATATCACGGACCTTAACAGTTCAAAATA GATTATGTTTTGTTGAGTGAAGATTTCAAGAACATCGTGGGGATCGATGA CCGGCTTTCATCCGTTAAACTGATCGTTTGTAACCCACCCTGTTCCAATA GCGGTGTAGTGAACATGGTGGACTTTATCATACAGGAAGGAGCAGACACA GCCAGCAGTCTGTCTAAAGAAGCCACTCCAGTCAAGATCAGAGGTCTAGC GGAAGAACAAGCCTCTACCATCAGGATTACTTTCTCTTTCCCAAATGTCC AATCCATTGTTTACTGTTCCTTTTCAACTTTCCCTGAAGAAAATGAGAAA TTGGTGCAACGCGTTTTGCAGAGTCAGCAAAATTCCAAGAATCGTTTCGA GATGTGTGTCGTCTTGGAAGATATGAGAGACATTTTCACCTCTAGCCAAG GTAAATGCTTTGTAATTGACTTAAATAATAAGATTTAAAAGCTATTTGAA GACAAAGACAAAGTTGAACTCATCATTAATTTTAAAGCTCGAGGGGTTCA AACTggaaactcctggatgggaaaggaagccacttatttcccatccaaaa cgcgtgacccgtatggttttcacacaaacgccagattggaAGTAAAAGCT ATCGCAAGATTTCGAAACACGCcgcttaaaaacaaagaaagagctAGATC TAATCTGTCATTCTCAATGCggcgcaaatcttaaggcttcacttttacTT GCTTGATAAAGGTTACAGATTCATCTCTAaccccttcggggctttaaact caatggaacTCATCCTCCCTTTTTACAGGAAGTGTATCAAAtgtgctttc tttctttttgctaGATGGGGATTTCTTGAGAGTGGAACCTTCGTACAAAA TGGATGGTTTCTTTGTCACTTTGTTGAAACGAAAGGTTTGCTTTTCGATA TTATTCTTTCTTAGTTATTTGAACTATTAAACCTTCTGATCAAAGAAATA ACCAAGTTGATTTTTGACAGTACAGTGCTTATTGTCATTGTGATATTTGG ATTTCTTTAATGTTATATGCGAATTTCTTTGAGAGTCCTGTCATTTACAC ACTTCACTCGTTCTGCAGATCAAGGAGGATTCAGTGAGTGAAGTGATGGA GCGAGCGGCCAAGAAAGGTTTATTAAAGAAATCGAGCGGTAAGAAAGAGA AGAGGAAGGGCGTTCCCAAAGATCAACCGCCCCACGTCGCCAATCGGTTG TCGGTTGTTGATAAGAAGAAGGCGGGGAGAAGCTCACCTAAACCACAAAA GAAACTGGAAAGACGAGACACTGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040357XLOC_040357Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064360-exon-scaffold_412-1491911889:20731..21051TCONS_00064360-exon-scaffold_412-1491911889:20731..21051Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:20731..21051TCONS_00064360-exon-scaffold_412-1510915933:20731..21051Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:20731..21051TCONS_00064360-exon-scaffold_412-1575043694:20731..21051Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:21354..21733TCONS_00064360-exon-scaffold_412-1491911889:21354..21733Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:21354..21733TCONS_00064360-exon-scaffold_412-1510915933:21354..21733Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:21354..21733TCONS_00064360-exon-scaffold_412-1575043694:21354..21733Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:22331..22389TCONS_00064360-exon-scaffold_412-1491911889:22331..22389Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:22331..22389TCONS_00064360-exon-scaffold_412-1510915933:22331..22389Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:22331..22389TCONS_00064360-exon-scaffold_412-1575043694:22331..22389Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:28415..28924TCONS_00064360-exon-scaffold_412-1491911889:28415..28924Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:28415..28924TCONS_00064360-exon-scaffold_412-1510915933:28415..28924Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:28415..28924TCONS_00064360-exon-scaffold_412-1575043694:28415..28924Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:29500..29668TCONS_00064360-exon-scaffold_412-1491911889:29500..29668Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:29500..29668TCONS_00064360-exon-scaffold_412-1510915933:29500..29668Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:29500..29668TCONS_00064360-exon-scaffold_412-1575043694:29500..29668Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:30630..30749TCONS_00064360-exon-scaffold_412-1491911889:30630..30749Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:30630..30749TCONS_00064360-exon-scaffold_412-1510915933:30630..30749Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:30630..30749TCONS_00064360-exon-scaffold_412-1575043694:30630..30749Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:30882..31280TCONS_00064360-exon-scaffold_412-1491911889:30882..31280Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:30882..31280TCONS_00064360-exon-scaffold_412-1510915933:30882..31280Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:30882..31280TCONS_00064360-exon-scaffold_412-1575043694:30882..31280Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:31695..31765TCONS_00064360-exon-scaffold_412-1491911889:31695..31765Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:31695..31765TCONS_00064360-exon-scaffold_412-1510915933:31695..31765Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:31695..31765TCONS_00064360-exon-scaffold_412-1575043694:31695..31765Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1491911889:31949..32156TCONS_00064360-exon-scaffold_412-1491911889:31949..32156Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1510915933:31949..32156TCONS_00064360-exon-scaffold_412-1510915933:31949..32156Clytia hemisphaericaexon
TCONS_00064360-exon-scaffold_412-1575043694:31949..32156TCONS_00064360-exon-scaffold_412-1575043694:31949..32156Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_412supercontigscaffold_412:20731..32156 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.194741 0 0.22724 0.186308 0.227836 0 0 0.29203 0.19604 0.214225 0.304101 2.81014e-07 0 0 0 0.16289 0.067313 0 0.00384125 0 0 0 5.52471e-05 0 0.405002 0 0.0406619 0.00232568 0.380666
Blast
BLAST of TCONS_00064360 vs. Swiss-Prot (Human)
Match: NSUN7 (Putative methyltransferase NSUN7 OS=Homo sapiens GN=NSUN7 PE=2 SV=4)

HSP 1 Score: 160.229 bits (404), Expect = 6.267e-41
Identity = 149/543 (27.44%), Postives = 253/543 (46.59%), Query Frame = 2
Query:  488 NKREGEILDDNSKRPISREERA-----QIKFGHTIYNKAANLFELLKDNTVVQP---KIG---------FENEFEKRRAYSLAFAAKRFEGILKDVLLDSTFYSSYFKLETYHHSKVMVMLLDFYDHGFRFSESVRKKIEVDSKNHLDHIHDIQKAFFQHKVKLCSAFARNRIKACALSLDAMLPAEVKERNEHGSRHSLFTWINPFVADAHCIINQLKSDGFVYKESLEELSGSEDNGLYFSYEEDGANTDLLEFPAWCKDEVYNHQLALDSSLVPMSKPRYLMTKACRRAHDEVCRVQQKSHHHAVLPATDGKENHDMVNGGCDVVLTHPETGSLAAYLCSFLGTNKRLFIFGCHGDKAVEVEKNLKN----IGISNYVLLSEDFKNIVGIDDRLSSVKLIVCNPPCSNSGVVNMVDFIIQEGADT--ASSLSKEATPV-KIRGLAEEQASTIRITFSFPNVQSIVYCSFSTFPEENEKLVQRVLQSQQ--NSKNRFEM---CVVLEDMRDIFTSSQDGDFLRVEPSYKMDGFFVTLLKRK 2029
            N+ + EI+   +  P+S  + +     +  +  ++Y  AAN+F+ ++     Q    K G          E++  +R +Y LAF+A +++ IL+ +L+DS  + S   +  +  S ++VML DF D  F+       ++  D++  +  + +++      K+KL +A AR RIK  ALS+  +LP  V+++    S   L+ WIN        + N LK  G+   +S+  +    D+ +   +  D    D+L FP+  K+++ N  L  D  L+   K R L                     H+V    +  ++  MVN G    ++H           S L  N    +F C G ++   + +LK     IG  N  +L E F NI   D RL  VK+I+  P CS  GV N V+FI+ E  DT      S+    V K+  LA++Q   +     F   Q++VYC+ S FPEENE +V++ L+ Q   N    + +    + L  +++I  S+    F R+EPS   +G F+++L R+
Sbjct:   12 NEEDPEIISQLTSLPLSGGKSSAGVPEKTGYPDSVYVMAANIFQGIRIEKSAQKVLIKYGNEPLRSLSESEDQSFQRLSYELAFSALKYQDILETILIDSCIFPST-TIPDHLSSLIIVMLYDFQDRKFQ------TRVLSDNEEPISEVQEVENLLNSFKIKLAAALARCRIKHDALSIYHILPETVRKQELRASTLPLYAWINTCKISPEEVYNNLKRRGYNKVKSVLHI----DDKV---FAVDQHCYDVLIFPSHLKNDLINIDLFKDYKLIFQDKSRSLAV-------------------HSVKALLNMDDDVLMVNTGSWYTVSH----------MSILTNNNTSKVFVC-GVQSQAKDPDLKTLFTKIGCKNIEILHEKFINIESKDHRLQKVKVILLLPRCSGLGVSNPVEFILNEHEDTEFLKDHSQGGISVDKLHVLAQQQYEQLTHAMKFTKAQAVVYCTCSVFPEENEAVVKKALEFQDLGNKGQPYRLSPPVLPLCSLKEIQLSTD--KFFRMEPSEITNGCFLSILTRE 508          
The following BLAST results are available for this feature:
BLAST of TCONS_00064360 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NSUN76.267e-4127.44Putative methyltransferase NSUN7 OS=Homo sapiens G... [more]
back to top