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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064323 ID=TCONS_00064323|Name=TCONS_00064323|organism=Clytia hemisphaerica|type=transcript|length=1546bp
caaacatcTCATCGTATGAAATGAAATCatcctctctctctctctgatAA
GTCTTCCTTAGAGGTTTTAAAAACATTTCGAACAAGTTTGGGAAGTTATC
AACATCTTCTTAAAAGATTGGCGAGCTTAGAGAATTTTTCTGATAACCTT
ATATCTAAGAATAAAACTTTTACTTTAATATAATATGGCACGATGCAGCG
ATTCCCTATCTTAACGTTGTCTCCAGAGAACTAGAAAGCAATCTAAATAG
CTAATAATAGTTTGACGATTGAAAAGAAACAGGAAATGTTaaggaataaa
gaaaaatcaaagaaacaaGATACTTCACAAAACTGCATTCATATATTTGT
GAATCCAGGGTGTACGATACTATATTGAATCTATATTCTTTACAGCAAAA
TTTCAGTCCTCCCTTCAGCATTCAGCAATCCAGACATTGAGATTGATGAA
TAAACTATTCTATACAGATTTCAAACTACCATTCAAACATTCTGAACAGA
CCTCCTTTGGTCTGGAAGATTTCATTGTGAATTTCAAACAGTTTATAATT
TTCTCTTAAACAGAAAAGTGTTCATATACCTTCTTCAATATTATAAAAGC
GGTCTTGGAAAATTCTGAAATTAGAAAATAATGTTTACTATTATAAGTTT
GATGGTTAGGAAATATTGATAATAGAATCCCTTATAACACACTGTAGAGA
AGACATGTTAAAGACATGTTTTCTGAAAGATTCTTAATCTTTGTTCTTAC
AAAGAAAAGCTCTTCTACTGTGACTTAACTTAAGAAATTGGAACAGAGGG
TGGTCTATTTCATGATATTACCACCCGgaataattgtttttaagtaGCCT
GGCTAGGGAttcaattttcttgatttttctgACTGTTCAAGGAACCAAAA
AATTGTATTCAGTCAACAACTACAGGTTAGTCTGGGTTAGTAAAAAAACg
agcagaaaaaaaaaacagttataGCATTTAATGGTAAAAGGACTTCAGCC
TGTGCTAGACTAAATCCCATCAGCGTGTGCAGGTTCGTGAGATATTCTTT
TACAAGGAAAGAGTATATTTACAAAGTCGATGGGTGTCCTTTATGATAGA
ACACTGATGGATGAAATTCTAGTCCTTTGCAGCGGTCTGTCAAATATATC
AGGTTAccataaaaaatacaaaaagtccTTCGCAACTTGGTCGATGGTAA
TGGTAGACGTTATGTGCAAAAGCTTGCTTTCACAATATCAAAATGTTATC
CCATTTACATAGGAATGTACAATGACCTTGCAATTCTATCTCTACCAACA
GAAAACTAACTTGACCAGGGGTTTACTTTGAGACATGTATGAAATTTCAA
ACCTTTCAATCTAAACAAACGACCTGACAAAACATAACATCAAAAAAGTA
GTCTTCAACAAAATTAACTTTCCAAACGTTTTTACTCTTAGCGTTCATTG
TAGCCGATTTGTCTATTGATCAAATCAGAAAGGCATCAAATTTTGCAACA
CAGGATAGacattgttttaaatttataAGAGTAATGAAGCTCTGTA Run BLAST on NCBI transcript from alignment at scaffold_410:86496..88041 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064323 ID=TCONS_00064323|Name=TCONS_00064323|organism=Clytia hemisphaerica|type=transcript|length=1546bp|location=Sequence derived from alignment at scaffold_410:86496..88041 (Clytia hemisphaerica)
TACAGAGCTTCATTACTCTtataaatttaaaacaatgtCTATCCTGTGTT
GCAAAATTTGATGCCTTTCTGATTTGATCAATAGACAAATCGGCTACAAT
GAACGCTAAGAGTAAAAACGTTTGGAAAGTTAATTTTGTTGAAGACTACT
TTTTTGATGTTATGTTTTGTCAGGTCGTTTGTTTAGATTGAAAGGTTTGA
AATTTCATACATGTCTCAAAGTAAACCCCTGGTCAAGTTAGTTTTCTGTT
GGTAGAGATAGAATTGCAAGGTCATTGTACATTCCTATGTAAATGGGATA
ACATTTTGATATTGTGAAAGCAAGCTTTTGCACATAACGTCTACCATTAC
CATCGACCAAGTTGCGAAggactttttgtattttttatggTAACCTGATA
TATTTGACAGACCGCTGCAAAGGACTAGAATTTCATCCATCAGTGTTCTA
TCATAAAGGACACCCATCGACTTTGTAAATATACTCTTTCCTTGTAAAAG
AATATCTCACGAACCTGCACACGCTGATGGGATTTAGTCTAGCACAGGCT
GAAGTCCTTTTACCATTAAATGCtataactgttttttttttctgctcGTT
TTTTTACTAACCCAGACTAACCTGTAGTTGTTGACTGAATACAATTTTTT
GGTTCCTTGAACAGTcagaaaaatcaagaaaattgaaTCCCTAGCCAGGC
tacttaaaaacaattattcCGGGTGGTAATATCATGAAATAGACCACCCT
CTGTTCCAATTTCTTAAGTTAAGTCACAGTAGAAGAGCTTTTCTTTGTAA
GAACAAAGATTAAGAATCTTTCAGAAAACATGTCTTTAACATGTCTTCTC
TACAGTGTGTTATAAGGGATTCTATTATCAATATTTCCTAACCATCAAAC
TTATAATAGTAAACATTATTTTCTAATTTCAGAATTTTCCAAGACCGCTT
TTATAATATTGAAGAAGGTATATGAACACTTTTCTGTTTAAGAGAAAATT
ATAAACTGTTTGAAATTCACAATGAAATCTTCCAGACCAAAGGAGGTCTG
TTCAGAATGTTTGAATGGTAGTTTGAAATCTGTATAGAATAGTTTATTCA
TCAATCTCAATGTCTGGATTGCTGAATGCTGAAGGGAGGACTGAAATTTT
GCTGTAAAGAATATAGATTCAATATAGTATCGTACACCCTGGATTCACAA
ATATATGAATGCAGTTTTGTGAAGTATCttgtttctttgatttttcttta
ttccttAACATTTCCTGTTTCTTTTCAATCGTCAAACTATTATTAGCTAT
TTAGATTGCTTTCTAGTTCTCTGGAGACAACGTTAAGATAGGGAATCGCT
GCATCGTGCCATATTATATTAAAGTAAAAGTTTTATTCTTAGATATAAGG
TTATCAGAAAAATTCTCTAAGCTCGCCAATCTTTTAAGAAGATGTTGATA
ACTTCCCAAACTTGTTCGAAATGTTTTTAAAACCTCTAAGGAAGACTTat
cagagagagagagaggatGATTTCATTTCATACGATGAgatgtttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064323-exon-scaffold_410-1491911889:86496..88041 | TCONS_00064323-exon-scaffold_410-1491911889:86496..88041 | Clytia hemisphaerica | exon |
| TCONS_00064323-exon-scaffold_410-1510915933:86496..88041 | TCONS_00064323-exon-scaffold_410-1510915933:86496..88041 | Clytia hemisphaerica | exon |
| TCONS_00064323-exon-scaffold_410-1575043694:86496..88041 | TCONS_00064323-exon-scaffold_410-1575043694:86496..88041 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_410 | supercontig | scaffold_410:86496..88041 . |
Blast
The following BLAST results are available for this feature:
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