TCONS_00064230 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064230
Unique NameTCONS_00064230
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length100

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064230 ID=TCONS_00064230|Name=TCONS_00064230|organism=Clytia hemisphaerica|type=transcript|length=100bp
CCTCGACCATGTGTTTGACTTCTGTTTTCAATTTGCTGACATATAAACGT
GCTACTGTAAACTCTTCATCGAACTGTGATGCGTTCTCAATCTCTGGTCT
Run BLAST on NCBI

transcript from alignment at scaffold_41:541638..541795-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064230 ID=TCONS_00064230|Name=TCONS_00064230|organism=Clytia hemisphaerica|type=transcript|length=158bp|location=Sequence derived from alignment at scaffold_41:541638..541795- (Clytia hemisphaerica)
CCTCGACCATGTGTTTGACTTCTGTTTTCAATTTGCTGACATACAAACGT
GCTACTGTAAACTCTTCATCGAACTGTGATGCGTNTCAATTTGCTGACAT
ATAAACGTGCTACTGTAAACTCTTCATCGAACTGTGATGCGTTCTCAATC
TCTGGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040263XLOC_040263Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064230-exon-scaffold_41-1575043694:541756..541795TCONS_00064230-exon-scaffold_41-1575043694:541756..541795Clytia hemisphaericaexon
TCONS_00064230-exon-scaffold_41-1575043694:541638..541697TCONS_00064230-exon-scaffold_41-1575043694:541638..541697Clytia hemisphaericaexon
TCONS_00064230-exon-scaffold_41-1510915933:541756..541795TCONS_00064230-exon-scaffold_41-1510915933:541756..541795Clytia hemisphaericaexon
TCONS_00064230-exon-scaffold_41-1510915933:541638..541697TCONS_00064230-exon-scaffold_41-1510915933:541638..541697Clytia hemisphaericaexon
TCONS_00064230-exon-scaffold_41-1491911889:541756..541795TCONS_00064230-exon-scaffold_41-1491911889:541756..541795Clytia hemisphaericaexon
TCONS_00064230-exon-scaffold_41-1491911889:541638..541697TCONS_00064230-exon-scaffold_41-1491911889:541638..541697Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:541638..541795 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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