TCONS_00064126 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064126
Unique NameTCONS_00064126
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2963

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064126 ID=TCONS_00064126|Name=TCONS_00064126|organism=Clytia hemisphaerica|type=transcript|length=2963bp
ATAAAAGTGCATAAATGCTTGTCTGTTTCGTAGCCAAAGCCTTAGGAGGA
GGCTTCTACTGCaagaaatcaaatcaatctcAATTTAGAGCCTCAAGATG
AAGGACAGAGCAGCAGCGGCAttcattttcgtattttttatgGTAAACAT
TGCTTTAGTGGATGCTGCAGACGAAACGGAAAAGAACGAAACAAAAAGCG
ATGGTTTACCAATCGTGTGTCCTCAATGTGATCCAAACTGGACGCCTTTC
CCTAACATGGTGTCTGGTCTAGTTGGCTATAATATCGTTAGTGGTGACCC
ATTGCAAACAGCGGCAGATCCTGGAATGGGAAATCAAATTTTCGCACCAA
CCAAATATATTGATGGTACAGTGTATCTTGATGATTCTATTACAGCTTTT
GAACTAAGTAATTGTCAGCGGTCAATGAGTATTCAATCGTGGACAAACGT
AAACCAAATGAGCTCATCATTAGAAGAAACTTCAACAAGTGGATATAATT
TGCAGTTGGGTTATGATTCAAAGGTCACTGCTGGGGTAGAAGGTTTGGAT
CTTTCATCTGATATTCCAGCTCCTTTCACTATGGGATGGagtaattctaa
aacaatgaaaaatgcTGCATCCTCATTCTCTGAAGAACAAGGCATGGTGG
CGTTTACACATGGCATGTGTATTcaatatgaaatgaaattgagtgCTTAC
TATTTACCTGAATTCATGCCACCATTTGTCATGGCTATTGGAGAGTTGCA
CGATGCGAGCAGTCAAAGTACAAACGAACAAGAAAATGCGtttaaaaagt
ttgtcaatgAGTTTGGAACCCATTATATGATACATTCAGAACTGGGAGCA
TTATTTGCACAACAAACAACTTACTCGGGAACTGTTCGTCAAAATATGGA
TCACGAGGCGTTACAACAATGTAATTCAAAGCAAGCGGTAAAGATATTTG
GTATTCAAACGGCGCCAGATACGTCAAAATGCACAGATACAGCTGAAGAA
ACCCTAAATTCGTATTCACAAACTGACGTCAAACAAGTCACAATAACTAA
AGGATCAAGACCTACTGATATTGCAGACTGGGCGACACAAGAGTTCACAC
CTACGCCATTAAGATACCAATTTTCAcccattgtcaatatatttcaagAC
AATTTCATCGAAAAACGAAACATACAAAATTCAGATGGTCAGCCTGTTAA
TTCATTAAAACTTCGCCAGTGGTTTATGCCTCTATATGACAAATATTGTG
AAGTGCTCGGCTTCAAATGTTCCATGGCTAAAGGGTGCGGTTTTGATGAC
AATTGTCCAGTTGATACAATATGTGAGGGTGAAGGTGAAACACATGAATG
CGGTGACGTTCTACACAAAGTGTATGTCCGAGTTGCATTgtacgaaaata
ctgatgctgGTAGTAATTATGAACCCTACGGTGATATGAAGATCTCAATC
GGTGATCGACCGgagaatcaaaacaaacaagccTGGAATGTCGCAAGAAA
AAATTGTCCAAGCTTTAAGTTGAGCACTTGGTATTATGGACCTGATAAAT
ATATTGAATTTTATGAACACTTTGATTTTCTTAAATCAGATGGTAATATC
TTCAAGTTACATGGACATGCTTGGGAGGCTGATAATAATCCTGATGATCT
GCTTGCAAAGTTTGATGATTTTCAAGATGATGTGAAAAAATATCTTGATT
ATGACTGGCTCCACTTCAATGGTAAAGCTGGCCATGGTAAAGAAGAAGGT
CAAGTAAAAATCAAATTCTATAAAGTTTGAATTTGACTAAACTTTGAAAG
AGGGAAATTAATCTAAAAGTTTTATcaaagaatttaattttttccaggCT
ATGAATTTAATGTTTCATATTGGTCACATTTTTATTATTACCTGACCAGA
CATCGGTTTACTGTTATGTAATATTTTGTATTATAACAGATATTTGTATG
GCCTTTCATTAgattattgagatttattaactgGAGGTGAGTGATATTCA
ATATCATTTACCGAGTAATAAATCCAATATCTAAGGAAAGTTGACATGCA
ATATATGTTTTAATATATACCAAGAACCATTTCATCTATATTCCAACAAA
AGCTAGTCAATCACAAGCGTTTTGGACTATATTTTAATTGAGGAACTAAA
GCACaaataattttccaaaactGACATTAAAATATCAGAAGCAACTCCAT
TGCTGGCGTGGTACTCAAGCGTGTAATAATTACCGTATCATTGCACAGTC
ATTGGCAATATGGAGATTTATTTTAGAGGAAAAAAGCTTACTGGTATgta
ataataagcagatattcaatggttaaaagttggttattgagatttattaa
cccgaggtgatgtaatattcaacgaggcgaagccgagttgaatatacatc
accgagggttaataaatccaatatccaacgaaaacctatttaatatatgt
tttattatatacctagggcaaaaataaaacattaactATGTCAATATAGT
CAAACGATTCACTTAAAACACTCCCagaatcgaacgttcgaatgtttttc
ttttttcaatgattttattAATTACTTTGActtataaaatttgtttatga
aattgacaatagatttattttaatgaatttctttgataacaacaagagca
acaaaaaaactcaaactttgaaagcaaaatttgaaaaaaaaattctaccg
tggtataatagccatggtatatcaggaattattcaatggctgtttttgcc
tacaatAAAAgttcttatttaattttttttgtctatCCCATACTATTAAT
TTTGTAAGTTTATTCAAAAGCAAGTTAAAATTGTAAACATTTCCTCTGAG
TTTAACCAAATTATCTTTCTTGttcatcaatttcaattttcgatGAAAGA
ATTTTAATTGTCATTAAATCTGTGAAAACTTCCGACTTtattattcatag
aattatatttcag
Run BLAST on NCBI

transcript from alignment at scaffold_409:25491..45792+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064126 ID=TCONS_00064126|Name=TCONS_00064126|organism=Clytia hemisphaerica|type=transcript|length=20302bp|location=Sequence derived from alignment at scaffold_409:25491..45792+ (Clytia hemisphaerica)
ATAAAAGTGCATAAATGCTTGTCTGTTTCGTAGCCAAAGCCTTAGGAGGA
GGCTTCTACTGCaagaaatcaaatcaatctcAATTTAGAGGTAATTTGTT
CATCTCAAATAACAAAGGGCATATAAAAAATGGTTGTAAAAATACAGTAC
TCATTTCGACTAAATTTAACCTGATATCagattgttgttgttttctcTCT
ACCACGCTGAACCTCTGAAGGGATGgttgaaaacatacaatctgataaat
atgcaatctcgaaactGTAAGGACCGCGTTTGCAAAGTatgaacaaaagt
ttttgatgttattatttaTCACGTATCATAGTATTTCCATGGATTTGTAA
GTTGAGTTAGTTCACAATAATAAGGacagaaattttgttttcatcacaaa
gaaaatgtgacaatttttttatgttaaaaattttcagatacgTTTAaaca
gagatttgggaaaagaggataagaatcgccgctgccgctcgctgttttct
caTTGTTGATCATTGAATTCGGCGTCGTCTGAAGTCGNNNNNNNNNNNNN
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NNNNNNNNNTCCTTTGGAGGGGTTTCCTACTTATATAAACAACTAAAAAG
CAAATAACGATCTTTTGGGGTTTCCACTGACAAAAAAATCTGCTGTTGCa
tgctttattttttgagaaaaagatggcGGAAGCAGGCATGCTAAAATTTG
ATGTGAAATgggacctttttatttttagctagTTTGCCTTACTGGAAAGT
CTTTCAGAGTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GTAGCAGTAAGGTTGATTAAGTGACAACCTATAGCTTAGTTTTACATGGC
ACATATCCTCAaactttcttagcattttgattgaagaTGGGCAAAATCGT
CTAAAAATGTTGTAGTTTTTTCCtagttttagatgaaaaaataatgtttt
cctaGCAAAACTTGCTTGCTGGCAATGGATTTTAGATTTGGTAAGTACGC
TAAATTATCCTTGATGTCTTTTTAGCTTCTActgaggaaaaacatttttt
tggggttgaaatttcaagtttttgtactGTATGTAACAGAAAATTGCAAT
CAAAgttctaatatttttacttatgtaaatatgaaataaatcttatataa
ctggacaatctattaaccggtcagagccaatctattaaccggtcagagcc
aatctactaaccggtcagagctNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTTAAT
AGATTGGCCAGTTATATAAGATTTATTTCACCGGTTTTTGTCAGTGGTCG
GTGATTTGTTGTTTGTGTTCTGTATTTGTTCATGATAGCTTGCTGCAAAA
GATCccattttcattattatatactttcaggttagttaCCATCATACTGC
CCAATAACCTAACCTAGATCCATGAATTATTTTGTaccttcacgtggttg
gtaTACAATGagaattggcttaaaatttgtcTGAATTTGTNNNNNNNNNN
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TTCTACAAAATAATATGTGACATCGGTTCGAGCATTCCTTGAGGAAAGTA
TTTTGGCTAAAACTGAAAGTTTTTGGCTCGACTAACACTGTATCCGCCtt
gtccaaaatgaaaaatgcttattaaaaaaataccaaaatacccgatatta
aaaatatttttatttcactttcgatatcaaccacggctgccattttgttt
gtacttctagtcttgtgcgcatagTATAATCAAGCGCTCCGATTGGTTCA
GAACTAAAACAATCGATCGGGCGCAGATatttcaatagaacaaaaggctc
CCTAGCCTATATTTCTATAGCTGAATAGCAcgattcttatcctcttttcc
caaatctctggtttaaaatacatttaaaaatttttatcgaataatttgGG
TAAATTGCTCTGCGCCCTCTGCTCCATTAATAATTGTAGCAAATTAGTTA
GTTAAGTTGTTTTGAGAATTGCCGGTTTAGTTTGATTAAATTATGAGCAA
TTAGAACACACaagattttagaaaattgatgtttaaaagttttatttcaa
cAAGCCAAGTTGTCAGTTGTGTCAGTCACATGTCTGTCAGGCCATGAGCT
ATGTTTAGAAATGATGTTAAGGAAGGGTCTCTTCTTGGCTTAAATTTAAC
AACTCAAatgttatttccaaaatttattcatcaatatttattttctttct
aactTTCAGGTAAAACCATAATATACCGAATACTGACACACATAATGCCC
CGATAAAATCCCTATAAGGACCCGAATACTGGTAGTGGTATtcttacaaa
gaaaagaaaaatgatgcattacaaattctcaattcttatgaaaaatattt
cctaaaagaaatatttcggatattgaataattaaaatgNATGGCTAAGAA
GatctaaaatattcttttgctaagccatttatttaattgtggttaaaaGT
TGCAAtgtaatgttttcttttttgtcctttatttcctaaaatcaaaatca
aatcatcaatCGGCGGCTAACTTTCTTCAGTCATaattttttagatgtgt
agTGATTCACTTGATTGGGAaacgcagcgtgcgacgctgcgcatacggct
agttcAATATAATCATCTTTAACAAAGAATATCCctcttgagaaaaaaac
tgaCAGATTGGcgtattttcgtattttgtttGTCGTAAAATTAGTAGAGA
TTCTCTAGGGAAATCATAGCAGTGTTTAAAAAGTGTTTCAACTTTCAGAC
TGAAGCACAGAGAAAGACGAGAAATCTCCTGTTGTCAAACGTCTCCAGGT
ATATGAATTTTTTACAGATCGAAAATTATTACGTTGAAGCTTATAGTTTT
TAGAGTTTCTTCATAGATTTTAATGAATATCTatctaaattattttcaat
cttcttatcaaatttgaaaaacagCAGTGCCATTTTGGGGCACATAAGTT
TTGGAAACGGgacaaatttgagaaaaatttcaaaagtagtTCAATTAACT
CTTAAATTTTAAACAAGGTTATTTCTTTTTAAAGGTttcgtttttaaata
aaagtgatatcgtttgcttactcgtcaaatTTATAATTAACAGacttttt
aatatttaattgaaacggatgtggagcaagatttgtcAAGAAAAGGAAAA
GATTCACatatcacatgtcaaaataaaaaatcaaaccaaatttgGCTAAT
TGAtcttttacaagtttgttttggacacgtgattttaattgttctcttta
atgacacgtgcttcgagtaatgtttacattttactactttgatgtccctt
taaatatttgtctgatatgaaacgggaacaattatgtaaaaataatactT
TAAACTTGCTTTCAGCCTCAAGATGAAGGACAGAGCAGCAGCGGCAttca
ttttcgtattttttatgGTAAACATTGCTTTAGTGGATGCTGCAGACGAA
ACGGAAAAGAACGAAACAAAAAGCGATGGTTTACCAATCGTGTGTCCTCA
ATGTGATCCAAACTGGACGCCTTTCCCTAACATGGTGTCTGGTCTAGTTG
GCTATAATATCGTTAGTGGTAAGTAGTTAGATTCTGATTGCTATCTttca
acacccctgtgtcacagacccgctggggcctcagccccactggaaatttg
gtaaaaaatttcgtccgtgtgggaaaaataccctaaaatttcagccccac
tgggaaattgattttgatctcatccccattcgaaattcattgtttaaaaa
ttgcactctgaaaccatccccactggattttctaACGTtataacaataga
atttttatccccactgtagGAAAAGGTTTCACCAGgatgtgaaacagggg
tgtcttTTATACTCTTCCGTATACATTCCTATTCCTATTGCTATAGATGA
TGTATTGAGtgaaaaagaataaaacaaactagccgtatgcgcagcgtcgc
acgctgcgtgtcccaatccagcgaatcactacacatctaaaaaattctaa
CGGAAGAAAGACAGCCGCCAATCGATGAtttgattttaggaaataaagga
gaaaaaagataacattgcattgcaatttttaaccacaattaaatAAATGG
CTTAGCAAAAGTatgttttggatgttcttagccATCGTGGCTGGCCACCG
TGGTTggacattcgagggtgactttgaaagactttaagagccattttttt
taagagtcttcagggtgtgatacctNNNNNNNNNNNNNNNNNNNNNNNNN
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tggtcaaaatttcatcaaaatctaagagggtgaggtatcacactttcttt
attctgaagatttttaaaaaaaatggctcttaaaaaagttttgaaagtga
tagggagctgctattgtaaacagaaagttttaaagggCATCTGAATAAGc
attctttaaaatgacaaaaaaaaattgggaagaaggttgattttaagcCA
TCAAACTccaaacttggtgaatagaaaatagtatcttggggtctcaaagt
tagtctagtggtaggaaatctgctcaaggtgcaaaaagatgatggttcaa
cgccatgaagaggaggctttgtagagctttgttagatattcgaaaacttt
ttacaaaacgtcgTAAACACACACGtataagcgtattaatatatagNATT
CCTATTCCTATTGCTATAGATGATGTACTGAGtgaaaaagaataaaacaa
attggaaaaatataaatgtttttcgccagccagttagtcacactagcgtc
ccgccgaaatgcgtatcaaagattagtGCTGCAAAAGCGCTTgcctgact
ctcaagcaaagaaaatgcgccgcaaaattTCTAGAGTGATTTATAAAAAa
gtaacccggcgctttttaatgaaattaacattttcaaaaagtatgagaaa
ttgctcaaaatttgagccgtagatgaaaaaaaaattgagccaaACCAACC
TTAAAAACTAATtcgaagatcaacttcccaagaaaaagatctatggggga
gacggaacccacctagatccgcgcaccgccggataggctactttccggaa
attttgccggacctcaaatactgacccatttacatgtgtggAATTATTTC
TACTTTAGCGTATAagcaaggccttaaaaatcgaagcgctgtctcgggaa
ttgaatgacgaaattttcttcgatttttgaaaaaaagtcttaCCCTTAGA
AACATTTTTACACGTGTTTTCtttcgaaatctaaaagttttcctaaaaac
cttgaattttgcgacccttagagagactttaaaaGGTGAAAAACCAACCC
TTACCCTCCGCACATAcgcagcacctatttttgcttttaattgctccccc
tccagaaaaatatttatagaGTTGACCCAATCTGACTCAAAatgagcaaa
atttgaaaaaaattgattttttttggaaattcttaTTGCTAAAGTCCAAA
GAAGTTTATTGGAGAAATAATGAGCATATTAACGATACTGATGATGACAT
TAATAAATAATGTCGAGATCATGATCAAGCTTCAGTTATTATGAAATTCT
TGTTTTTCCTTAGGTGACCCATTGCAAACAGCGGCAGATCCTGGAATGGG
AAATCAAATTTTCGCACCAACCAAATATATTGATGGTACAGTGTATCTTG
ATGATTCTATTACAGCTTTTGAACTAAGTAATTGTCAGCGGTCAATGAGT
ATTCAATCGTGGACAAACGTAAACCAAATGAGGTATGCTAAAATGTTTAC
ATCAATAATCTATAAAACATTTTTACTACGATAGCacgtacataattatt
caaggAAGCCTGAATTCATTTTcttggattaatttttgcgtggataaatt
ttcgattttcacgaattttagccattttcacgTAATTTAATCTAcgcgaa
aaatttgaagacCCTTGATTTGCGAAAATTAATCTACGctaaattttttg
gaattttacaaaatcgcaaaaatataaaagttcgCAAAAACCAAAGTTca
caatcaaaacataaaacgAGTTTGTCTGCCTTTGTTCGATTAAATACACA
CCTCTTttctaaaaaacattttacaatCTTTAAAgtggtactctcgggta
cctaatagtcatccccccgctaattaatttttgctaaatttctcCACTcg
ggacattcttattccaccccatcccccgcttattaattttcgggaatatg
ttttgaaagttccctaTGTTGTCcaaattctgctgtattagcctcctttt
caaaaattttccacccaggacatttttattccaactccCTCCCCCACCCC
ggttattaagttttgagatttttttcaacCCCCACCCTCCCACTTATTCC
AACTCCCCCGGCtattagatacccgagagtaataAATCTTGTTTTCTAGC
TCATCATTAGAAGAAACTTCAACAAGTGGATATAATTTGCAGTTGGGTTA
TGATTCAAAGGTCACTGCTGGGGTAGAAGGTTTGGATCTTTCATCTGATA
TTCCAGCTCCTTTCACTATGGGATGGagtaattctaaaacaatgaaaaat
gcTGCATCCTCATTCTCTGAAGAACAAGGCATGGTGGCGTTTACACATGG
CATGTGTATTcaatatgaaatgaaattgagtgCTTACTATTTACCTGAAT
TCATGCCACCATTTGTCATGGCTATTGGAGAGTTGCACGATGCGAGCAGT
CAAAGTACAAACGAACAAGAAAATGCGtttaaaaagtttgtcaatgAGTT
TGGAACCCATTATATGATACATTCAGAACTGGGAGCATTATTTGCACAAC
AAACAACTTACTCGGGAACTGTTCGTCAAAATATGGATCACGAGGCGTTA
CAACAATGTAATTCAAAGCAAGCGGTAAAGATATTTGGTATTCAAACGGC
GCCAGATACGTCAAAATGCACAGATACAGCTGAAGAAACCCTAAATTCGT
ATTCACAAACTGACGTCAAACAAGTCACAATAACTAAAGGTGAGAAAATA
TTACTATCTAGAGTATTACTCTAGAATTAGCAtaccagctgacacacaac
gctgtttcaacgtccatataacgctcacagcgtccatataacgttagatg
aacgttaaaacaacgatGTGTGCCAGCTGCGATATCCCAAATGATTTGCA
ATGCAATGGGAATCGGCCTCTAATTGGCTTCttaaagcgcaaaaactgga
cacaACAGCTGTTTCTAGctaaaaaacactgtttttaagggttaatatct
cgagttataaatcaaacataaatcacctatacttgctatatatctctaat
cttaattttttgagagctttccaaaaatatacaacaggtctctattttct
cgaactaaaatattcattaatttttgaccttATAATTTTGGCCtaagacc
gtcatatttgtccgaaaatcacaccaaagtgtgaaaaaaaaaaaaaaaat
tctctaggGGATTAGGGTGGGatcaaaatgcttgcaacgttacaaatcat
tttcataagctcattttgggctcaaacaNTGGGATCAAAATggttgcaac
gttacaaatcattttcataagCTCATTTTGGTCTCAAACGAAGCGAATGA
CTAAGtagaataagattcagtctagctctaggcagatgtttttttatttt
gaaattttgcgtaattcgcacaaatcctcaattttgcgctattttgatga
cgtcataaaaattgaaattccaataacttttgttacaatcatcaaaataa
tttcaaattttgaccaaagatgcattttattaatgttttcaagattagaa
aaaaaattattgaaatttgatgatgtcatcactTTTCGGCCAAAAAACTG
AAATCCTTAAAATATGATGATGTcatcaagattttaaaattttttaaaaa
tatctttatgaataaaatttgcattgaaatgcatctttggtgaaaatttg
aaattattttgatgactctatcaaaagatattgcaatttcaatttttatg
acgtcNttaaaattttttaaaaatatttttatgaataaaatttgcattga
aatgcatctttggtgaaaatttgaaattattttgatgactctatcaaaag
atattgcaatttcaatttttatgacgtcatcaaaatagcgcaaaatgcga
attacgcaaaatttcaaaataaaaatatatctgcccagactgaatcttat
tctacttagttatacgcttcgtttgagcccaaaatgagcttatgaaaatg
atttgtaacaaTACAAGAATTTTGACCTTCACGAACCCGCCTTATTCCCC
TGGAGTTGGTacccaaattattttgattcctCTACCCCTtatagctttcc
aaaaatgtataacaagtgctttgactaaaaaaatcgagcaacCTCAAAAA
AGCTAACAAATTTTCCCCTACTATCagtggggattgatattcacatattt
ctttatggctgggatttgaatttttttgattcaaGTCAgtaaatccagtg
gggatggaaaaatagcatattattttgcaatgaggattggtttatttgat
tattttaatggggacaaaaatcagAGCATAATTTTCCACCAGNtgaggat
tggtttatttgattattttgatggggacaaaaattagagcaTAACTTTCC
ACCAGTTTCCACcgggaacgatattttggccaatttttccactgggaagg
ggtcccagtgggtctgtgagaagggggtgcatGCAATTCCACCATAATTT
ATCATTAGCCAAATCAAACCAATTATTGTCATTTAAAACATTAGCCTTTT
TCAAATTAGACAAACCCTTTTCTACGCAAATTTTGGGGCACCTTTAGGAC
GTTTAGATATAAAACCCAACGAAAAAGCAGTTTGCGTAGCAAACGATCAA
AGCTAGTTCTTGCAATTAGCGTCGAGTAATATAGTAATATACCAGGTGGG
TCAAAAAAAAGTATTAAATTGctagaataaaaaacaaaataaacaatctt
CCATTGTGAAGGAATTTGGTTGAGCTGTAAgtgtaaaaaaagtttaaaat
ctgTGTAAGATCCTAATTTAAGTCTTGGGTATGAAGTTACAAATCGAAAG
AAGAATGATTTAATTAAGAAATTTACCATGTCCCTAGTAAAAACAATCAC
GGAATGGATAATTcaccagaaaaatgaaaacacctACGCCTCCTTCGCTT
GACATAATAGGAATTTGTCTTTCcgataaaaactttattttctaTCAACC
AAAAACTGTATGAACAACGTTTATCGATCGAACATTGTACTAGAACTTTT
ATAAACCCTGTTAGCTAAAGCTGTCACAAGCAACGAgtaaaagtaagtaa
gtttgcaaccgcagtcgagggcgacccgaagactcccttttcgtatagct
acccgaaggtaggggaaggcgccactcctttccctggatttctccactta
cccttgatccttctctttagTTACTGGgaatcaagcagagaggcatcaag
taccattttgggaatctttggtatgacccgactggggatcgaacccacaa
tcttgcgcaccgtagctggatgctctacatTCATGCTACGGTCGGAAAAG
AACCTAGATGTTTATTCATGCATTAAGTTGTAACTTTCATTTAGGATCAA
GACCTACTGATATTGCAGACTGGGCGACACAAGAGTTCACACCTACGCCA
TTAAGATACCAATTTTCAcccattgtcaatatatttcaagACAATTTCAT
CGAAAAACGAAACATACAAAATTCAGATGGTCAGCCTGTTAATTCATTAA
AACTTCGCCAGTGGTTTATGCCTCTATATGACAAATATTGTGAAGTGCTC
GGCTTCAAATGTTCCATGGCTAAAGGGTGCGGTTTTGATGACAATTGTCC
AGTTGATACAATATGTGAGGGTGAAGGTGAAACACATGAATGCGGTGGTA
AGCATTTTTTCTCagctgttttgtttttaagggttacttagactacacaa
tatattggtgagCAATATTCGTCAATAAAAGTTAtggaccgtaatgtacg
gagTAAACAACAggtgctctattataaaaaggtaAACAATCCTCCTATAT
TATATTGTTGAAATATTGCATAAttaagctgacaatatattgcggatacc
gtttcaatatattgccggcggtcagcaatatatcatcaaaatattgtctg
acaatatattgtgtagtgtatgtagccctttataGAAACAGAAAAAGTGT
AATTTTTTAtatcatggaggtaataaaagtatagatggagagtcaatgcc
tttctattctgatttatcatcggaagcaaacagctatttagttgctttgg
gaataagatgattaattttgggtatacacgtgggaatatttaagataaaT
GGCAAgccattacatttttaacaagtatattgaaatataatagccctgtc
atgaaaaattgaaaaaacttcacataataagcaaaatactccaaacttct
aggggaagctgcccataaagccatcgatagatttacaaaagaattacgtg
ttacgattaggaaccttgtatcaatcattttgtcagagtatgaaaaccgc
tgcccacttagacgtgaagattttaagataagaaactttcgaTGATAAAG
TGATGCAACTttcaatgttaacaaaatgccagcccaaaaatgtgtcctta
tgaaattaatatactcttttagtcttacatcagttgaaactatttcaaat
tgcattttaacaaggattttcggCAAGATtaggtttttcaaaatcaacaa
aacagtctctttctgttcttataaacttataaattgatgttttttgcttc
caatgatggtacatcaaagtaAAGCCGCTTTGAATTCAAAGAGTATATAG
ATTTAtgaaagatttcaacgaccatttagatcactaccgagacgttttct
ctccctctatatctttattacctccatgttTATATGTAGTCCCTTTGAga
acccctgtgtcacagacccactgggaccccatccacactggaaaatttgg
caaaaatttctccggtggaaaaatatcctgaaatttcagctccactggga
aattgactttgatttttatccccactgaagaaaaaagttccatcggTGCT
GTGAGACAGGTGTGTTTTTGCCAAACGTCATCAAAGTCATCCAGTATGTA
ATTATAAGTCGGAAAAAAATGCAGAATTCATTTTATTGGTCCAATCTGAC
GTAAAAGATAAAGTTTAGTGTGATTCttgtatgtgttttttttgTCTTCA
GAATGGGGCGAATGGGGTTCATGGGCTTGTAGTGAATGTGGTGTTTCATT
GCAAAAGAAAAGAACACGCGAATGTACAGGGTGCAATGGAGAAGAAGAAC
AAATTCAATACTCTGAAGATCCAACAGATTGCTGTAGTAAGCATAATTCA
GcctttaaagattttaaaatagcTGTACGTCTAGATGTGGTTTAGAAAGA
GTATTTTCCAGGGGAGTCTTCAAAAGTCCGACAGCTTTCTAGCCCGACAG
AAAATTCCGGCAATGCAACGTAAGGTTGCGCCAGTTTTTCAAAATCGATT
CCTGCCATTTTTTGCTGATtactttttttaatgaaaaagacACAGCACAT
TTTCGGCAACATCTAATAGAcaatatcggcttaacgtgaaactcagattt
gatccccgaatattgcccacaatgctttgcgcggaaaaaagttcacggtg
aaatcttttccgcacaaagcattgtgggcaatattcggggatcaaatctg
agttttcacgttaagccgatatcgtctattgtagAACGTTTTTGTAAGAC
TCAAATAAGCTCATAAATGCTATGCTGATTGCCATCAATATTTtactaaa
atgtcaaaagatGGATAGGTTTCTGACCCCCTGaaaagtatttttgaaaa
ttatttcaattcaTTCTGTAAACTCAAGAAatattagtcatttaaaaaag
gaataaaccagctgcactggaaagtcagcccaaaAGGCTTAGAATGATTA
AGAcgaagcaaaaataaaaaactgagcacattttttttgcttggaacgTT
CAGACGAAAACTGCACAGCACAGTCGAATCCTGTCTTCAAGGAAATTTAT
TCCCGAAAGATATAGTCCAAAGTTTATCACTGAACttgcaaaacaataaa
aaaaaagagcCCGTTTTCAAGTCAACCAGGGCAAGGTTTTAAGCTGCATT
ATTTGagtgaatgaatattttttgaatatttttttcgcatttatgacgtt
ctaagattaaagaatttatgatatgaaaatgaagattgtAGCATTATTCT
ACATGAAGTTGACTTTCTTCTACTTCGTTTTTCATCTtgtttcaccattt
tttgaatttcttttttgataatattccactccaaaatatctttttgacaa
tttcaatttatggaagtgtatttctcaggtctattatATTTACAATTTAG
ATAAATGATAGAGTTTTTACAGATCGGCCCACACTGGCGTGGGCCTCTAA
CCCGCTCTTCTTATAATCATGTTGTTTCcgtcgtaaatttctttaaatag
agtTTAGTCTACCTCTCACTTTTCATATATGACTCTTGTCTTTTGCTttc
gatgttttttttcttttgctttatgaTGCCATTGTTTAATTATCTCGCgt
tctttccttgaaaaatcgtctgaTACTCTGAAATCATCTTTATCTAACAC
AGCGTATTTTGGTTTGttacattgggcttttccagaaatagtcctcAACC
AAAATATACTCAACCCCTTCGTTGGGGGTTGAGTATATTTttaaaagtgg
atatccaggggtctttactaataaagtgggatatccagggggttcgatac
ttcgaaaaatcgaTATCCTCGACAgtgggggtaatttttttttctggaaa
agcccatttacaAAGCGCATATAAATGTTATTTTGCTTTTACAGACGTTC
TACACAAAGTGTATGTCCGAGTTGCATTgtacgaaaatactgatgctgGT
AGTAATTATGAACCCTACGGTGATATGAAGATCTCAATCGGTGATCGACC
GgagaatcaaaacaaacaagccTGGAATGTCGCAAGAAAAAATTGTCCAA
GCTTTAAGTTGAGCACTTGGTATTATGGACCTGATAAATATATTGAATTT
TATGAACACTTTGATTTTCTTAAATCAGATGGTAATATCTTCAAGTTACA
TGGACATGCTTGGGAGGCTGATAATAATCCTGATGATCTGCTTGCAAAGT
TTGATGATTTTCAAGATGATGTGAAAAAATATCTTGATTATGACTGGCTC
CACTTCAATGGTAAAGCTGGCCATGGTAAAGAAGAAGGTCAAGTAAAAAT
CAAATTCTATAAAGTTTGAATTTGACTAAACTTTGAAAGAGGGAAATTAA
TCTAAAAGTTTTATcaaagaatttaattttttccaggCTATGAATTTAAT
GTTTCATATTGGTCACATTTTTATTATTACCTGACCAGACATCGGTTTAC
TGTTATGTAATATTTTGTATTATAACAGATATTTGTATGGCCTTTCATTA
gattattgagatttattaactgGAGGTGAGTGATATTCAATATCATTTAC
CGAGTAATAAATCCAATATCTAAGGAAAGTTGACATGCAATATATGTTTT
AATATATACCAAGAACCATTTCATCTATATTCCAACAAAAGCTAGTCAAT
CACAAGCGTTTTGGACTATATTTTAATTGAGGAACTAAAGCACaaataat
tttccaaaactGACATTAAAATATCAGAAGCAACTCCATTGCTGGCGTGG
TACTCAAGCGTGTAATAATTACCGTATCATTGCACAGTCATTGGCAATAT
GGAGATTTATTTTAGAGGAAAAAAGCTTACTGGTATgtaataataagcag
atattcaatggttaaaagttggttattgagatttattaacccgaggtgat
gtaatattcaacgaggcgaagccgagttgaatatacatcaccgagggtta
ataaatccaatatccaacgaaaacctatttaatatatgttttattatata
cctagggcaaaaataaaacattaactATGTCAATATAGTCAAACGATTCA
CTTAAAACACTCCCagaatcgaacgttcgaatgtttttcttttttcaatg
attttattAATTACTTTGActtataaaatttgtttatgaaattgacaata
gatttattttaatgaatttctttgataacaacaagagcaacaaaaaaact
caaactttgaaagcaaaatttgaaaaaaaaattctaccgtggtataatag
ccatggtatatcaggaattattcaatggctgtttttgcctacaatAAAAg
ttcttatttaattttttttgtctatCCCATACTATTAATTTTGTAAGTTT
ATTCAAAAGCAAGTTAAAATTGTAAACATTTCCTCTGAGTTTAACCAAAT
TATCTTTCTTGttcatcaatttcaattttcgatGAAAGAATTTTAATTGT
CATTAAATCTGTGAAAACTTCCGACTTtattattcatagaattatatttc
ag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040207XLOC_040207Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064126-exon-scaffold_409-1491911889:25491..25580TCONS_00064126-exon-scaffold_409-1491911889:25491..25580Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1510915933:25491..25580TCONS_00064126-exon-scaffold_409-1510915933:25491..25580Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1575043694:25491..25580TCONS_00064126-exon-scaffold_409-1575043694:25491..25580Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1491911889:32006..32208TCONS_00064126-exon-scaffold_409-1491911889:32006..32208Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1510915933:32006..32208TCONS_00064126-exon-scaffold_409-1510915933:32006..32208Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1575043694:32006..32208TCONS_00064126-exon-scaffold_409-1575043694:32006..32208Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1491911889:36754..36922TCONS_00064126-exon-scaffold_409-1491911889:36754..36922Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1510915933:36754..36922TCONS_00064126-exon-scaffold_409-1510915933:36754..36922Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1575043694:36754..36922TCONS_00064126-exon-scaffold_409-1575043694:36754..36922Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1491911889:37590..38179TCONS_00064126-exon-scaffold_409-1491911889:37590..38179Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1510915933:37590..38179TCONS_00064126-exon-scaffold_409-1510915933:37590..38179Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1575043694:37590..38179TCONS_00064126-exon-scaffold_409-1575043694:37590..38179Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1491911889:40835..41137TCONS_00064126-exon-scaffold_409-1491911889:40835..41137Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1510915933:40835..41137TCONS_00064126-exon-scaffold_409-1510915933:40835..41137Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1575043694:40835..41137TCONS_00064126-exon-scaffold_409-1575043694:40835..41137Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1491911889:44185..45792TCONS_00064126-exon-scaffold_409-1491911889:44185..45792Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1510915933:44185..45792TCONS_00064126-exon-scaffold_409-1510915933:44185..45792Clytia hemisphaericaexon
TCONS_00064126-exon-scaffold_409-1575043694:44185..45792TCONS_00064126-exon-scaffold_409-1575043694:44185..45792Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_409supercontigscaffold_409:25491..45792 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.161575	0	0	0	0	0	0	0	0.279473	0.788151	0.721023	0.26155	0.809489	0.11316	0.204395	0	0	3.5395	1.14861	0.227697	0	0	0.663681	0	0	0.756349	1.19492	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064126 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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