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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00064074 ID=TCONS_00064074|Name=TCONS_00064074|organism=Clytia hemisphaerica|type=transcript|length=773bp
ACACATTTAAAAGTACAATTTGATTTGTAAAAACAATAAGTAGGCAAAAA
ATAACCCAAGAAAGTTTCTTTGGCTGTGGCTGTTGCTGGCAAGTTTGAAG
CTTGAGAAAATGGGATGAGTCAAATTTATATAGAGAAAAAgccttttcat
aaaattttctatAATATAATGCAAATCACATAAAAGCAAAAGACCAGGTC
ATCCTATTGATCAATTTTACCAAGAGTTTGATCTAGTTCATGACCTTCTA
GAATATAACCATCACATTTACCAACTTGTCCAGGTCTGGTCATAACGCGT
GCTAACAGCTGTCCATCCTTAGTAAATTGTTCAAATTTGTTTCTCAATTC
TTGGGAAGAATCAGGAGATAGTAAAGATAACGGATCCAAATCAGAGATCA
ATTGAAGTCCTTCCACAGCTAATACAGCACCTTTATTAATGATTTTTTCG
TTCTTATAATGACTTCCAGCCTCACTGTATACAACATCCATAATTTTCAT
AGTATGTTCAATATTTTTAGAATTGAGAGTATAGACACCGTCACACACTG
TAATAGCTTTTGCTTTTTTACCACCGCCATAAGCTTTTCTTTCAACAGTA
ACATTTTCAGCACCAAGTTTGACATTTGCAGGTGGCCGATCCCTTCTCCA
CTCAGAACGAAGTCGGTTTACCACAGCCGAGGAATGAATGCATCGTTGAG
ATGTTTTCCCAAATAATCTAGtttgtaacatttcaaaataatgtAAAGTT
GTATTTGAGTCTTATTATTTAAC Run BLAST on NCBI transcript from alignment at scaffold_407:263814..264646- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00064074 ID=TCONS_00064074|Name=TCONS_00064074|organism=Clytia hemisphaerica|type=transcript|length=833bp|location=Sequence derived from alignment at scaffold_407:263814..264646- (Clytia hemisphaerica)
ACACATTTAAAAGTACAATTTGATTTGTAAAAACAATAAGTAGGCAAAAA
ATAACCCAAGAAAGTTTCTTTGGCTGTGGCTGTTGCTGGCAAGTTTGAAG
CTTGAGAAAATGGGATGAGTCAAATTTATATAGAGAAAAAGCCTTTTCAT
AAAATTTTCTATAATATAATGCAAATCACATAAAAGCAAAAGACCAGGTC
ATCCTATTGATCAATTTTACCAAGAGTTTGATCTAGTTCATGACCTTCTA
GAATATAACCATCACATTTACCAACTTGTCCAGGTCTGGTCATAACGCGT
GCTAACAGCTGTCCATCCTTAGTAAATTGTTCAAATTTGTTTCTCAATTC
TTGGGAAGAATCAGGAGATAGTAAAGATAACGGATCCAAATCAGAGATCA
ATTGAAGTCCTTCCACAGCTAATACAGCACCTTTATTAATGATTTTTTCG
TTCTTATAATGACTTCCAGCCTCACTGTATACAACATCCATAATTTNGAT
GATTTTTTCGTTCGTATAATGACTTCCAGCCTCACTGTATACAACATCCA
TAATTTTCATAGTATGTTCAATATTTTTAGAATTGAGAGTATAGACACCG
TCACACACTGTAATAGCTTTTGCTTTTTTACCACCGCCATAAGCTTTTCT
TTCAACAGTAACATTTTCAGCACCAAGTTTGACATTTGCAGGTGGCCGAT
CCCTTCTCCACTCAGAACGAAGTCGGTTTACCACAGCCGAGGAATGAATG
CATCGTTGAGATGTTTTCCCAAATAATCTAGTTTGTAACATTTCAAAATA
ATGTAAAGTTGTATTTGAGTCTTATTATTTAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00064074-exon-scaffold_407-1575043694:264162..264646 | TCONS_00064074-exon-scaffold_407-1575043694:264162..264646 | Clytia hemisphaerica | exon |
| TCONS_00064074-exon-scaffold_407-1575043694:263814..264101 | TCONS_00064074-exon-scaffold_407-1575043694:263814..264101 | Clytia hemisphaerica | exon |
| TCONS_00064074-exon-scaffold_407-1510915933:264162..264646 | TCONS_00064074-exon-scaffold_407-1510915933:264162..264646 | Clytia hemisphaerica | exon |
| TCONS_00064074-exon-scaffold_407-1510915933:263814..264101 | TCONS_00064074-exon-scaffold_407-1510915933:263814..264101 | Clytia hemisphaerica | exon |
| TCONS_00064074-exon-scaffold_407-1491911889:264162..264646 | TCONS_00064074-exon-scaffold_407-1491911889:264162..264646 | Clytia hemisphaerica | exon |
| TCONS_00064074-exon-scaffold_407-1491911889:263814..264101 | TCONS_00064074-exon-scaffold_407-1491911889:263814..264101 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_407 | supercontig | scaffold_407:263814..264646 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 |
Blast
The following BLAST results are available for this feature:
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