TCONS_00064046 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064046
Unique NameTCONS_00064046
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1675

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064046 ID=TCONS_00064046|Name=TCONS_00064046|organism=Clytia hemisphaerica|type=transcript|length=1675bp
TTTGGCAAAGAAATTTGAAGGTAGAGACGATATTGAATGTCCCTCTTGTA
GTACCAAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGA
CTCATTCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAA
CAGTAAGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAG
GTAGCTTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGT
CCGATACCTGCTACGGTCGAACAAGCTACcttgaagattttgaaacataa
aatcGATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAA
GGCCTCGAGTATTCATGTCAACACCGAAACCTGTGAAGCCAACAGCGGAA
TGTTCTTCTCGTCACCAACGCCGCCGAAATAAAGGCATTAGAAAGTCTAT
TGAGTTTGCGTCGAAGACGACTATTTCCAAACAGATGGCATCACTATCTA
AATTCCTTCCTAAAAATCAACGAAAAGATTTCCTGGAGGAAATTGGTTTT
GGTCGGATTGAGATTGACGAGAAAAAAATGCTCTCCCTTAAAATCAGTCT
TGGAATGCCTtgggaaaagttgaaaaagataGGAAGGTTTCTTAGCCAAC
ACAATATCAAAACTGGTGGTCACAACAAAATGCGAAATTTGCACAAAGAA
CTGCGTGGTAGTGGCTGGTGTGTTAAAACCGGTTCATTTATGAAGAAAAT
CAGCAAAagcaaatttgttttaaatgaagTGCCCTGGGGCTACATAGAGG
ATTTGAAATCACACGTCCTCGAAAGAATCGACTTAATTGACGAGGCAAAA
GAATTGAAGTTTGAAGAGTTTATGAAAGATGAAGTGCATGTGAAAATCGG
GGAAGACCATGGTGGTAACACAGGAAAGGCCTGTTATGAGATTTGTAACC
GAGATTCACCAAACAGTAAAGAAAATACAGTCatattcaattattttgaa
gaaaaagaccaTCCACTCAACTTGAAAATAGCCTTATCACGATTTAAAGA
ACAAATCGACGACCTTCAAAAGTCCAGTTGGAAtgacAAAAAGATTCGTA
TGTTTTTGATGGGGGACTACGAGTTCCTGTGTAATGCATATGGCATTAGT
GGAGCAAGTGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGAAGA
GATTCAAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAAAGA
CACTTGATGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCGAAA
GCTAAGGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACCTCT
GACACAgGTTTCAATCCCTGCTTTACACATTTCGTTGGGCACATACAAGA
AATTTTTCGACCTTTTGGAAGAATACTGTTACCAGCTGGACTTTATGATC
GCAGGTTCGACAAGTCAAGCAGATGGATTAGAACGGTCCAAAATTGACAA
ACTTGGTGAAACGTGGCAGGAAATCACTCTTTTACGGCAACAGATTCGGG
ATCTTGATCGCACCATCAATTTGGTTCATGATGCCATTGCTCAAAACATT
GCCAAAGATCCTGCACACGAGAAAGAAATAAGAGCTGTTTATGAACCCCG
TCTGTTACACTTGTCTGACTTGGTT
Run BLAST on NCBI

protein sequence of TCONS_00064046-protein

>TCONS_00064046-protein ID=TCONS_00064046-protein|Name=TCONS_00064046-protein|organism=Clytia hemisphaerica|type=polypeptide|length=558bp
LAKKFEGRDDIECPSCSTKFSPTLIKPCTVRTRLIQTLVLKCRCGLQFKN
SKLLDEHKKDCVGEKEGSLLTVHELLELDLDECPIPATVEQATLKILKHK
IDSSENGTAEFPSGGPRPRVFMSTPKPVKPTAECSSRHQRRRNKGIRKSI
EFASKTTISKQMASLSKFLPKNQRKDFLEEIGFGRIEIDEKKMLSLKISL
GMPWEKLKKIGRFLSQHNIKTGGHNKMRNLHKELRGSGWCVKTGSFMKKI
SKSKFVLNEVPWGYIEDLKSHVLERIDLIDEAKELKFEEFMKDEVHVKIG
EDHGGNTGKACYEICNRDSPNSKENTVIFNYFEEKDHPLNLKIALSRFKE
QIDDLQKSSWNDKKIRMFLMGDYEFLCNAYGISGASGRHCCLLCQATKEE
IQKPRKSRNCKTRTLKTLDENLRNFQKHGNLSKAKEHFNVIEERLFNIPL
TQVSIPALHISLGTYKKFFDLLEEYCYQLDFMIAGSTSQADGLERSKIDK
LGETWQEITLLRQQIRDLDRTINLVHDAIAQNIAKDPAHEKEIRAVYEPR
LLHLSDLV
Run BLAST on NCBI

transcript from alignment at scaffold_407:336623..339223+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064046 ID=TCONS_00064046|Name=TCONS_00064046|organism=Clytia hemisphaerica|type=transcript|length=2601bp|location=Sequence derived from alignment at scaffold_407:336623..339223+ (Clytia hemisphaerica)
TTTGGCAAAGAAATTTGAAGGTAGAGACGATATTGAATGTCCCTCTTGTA
GTACCAAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGA
CTCATTCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAA
CAGTAAGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAG
GTAGCTTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGT
CCGATACCTGCTACGGTCGAACAAGCTACcttgaagattttgaaacataa
aatcGATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAA
GGGTAagctaaaaaattttttatttcgtaAAAATATGTACCTAGCCTTTT
GTGCATTGTCTAAGGAAAGAGGTTTTGCTAATTTTCGAAGTCatttaaaa
tatgaaaaaaaaaatcctttttttcagCCTCGAGTATTCATGTCAACACC
GAAACCTGTGAAGCCAACAGCGGAATGTTCTTCTCGTCACCAACGCCGCC
GAAATAAAGGCATTAGAAAGTCTATTGAGTTTGCGTCGAAGACGACTATT
TCCAAACAGATGGCATCACTATCTAAATTCCTTCCTAAAAATCAACGAAA
AGATTTCCTGGAGGAAATTGGTTTTGGTCGGATTGAGATTGACGAGAAAA
AAATGCTCTCCCTTAAAATCAGTCTTGGAATGCCTtgggaaaagttgaaa
aagataGGAAGGTACAGTACCTGGATATCTTTAtctttttaacaaataaa
aaacgCAACTGAGGTGCTTCTCAAAAGGTTGAGCTACGAATTGGTGctaa
aaagaaatttctaaattgtgaagcaataaatattttcaaaattaaaaaga
aaatattctatatattaagttaaatatttcattttgtttAAGGTTTCTTA
GCCAACACAATATCAAAACTGGTGGTCACAACAAAATGCGAAATTTGCAC
AAAGAACTGCGTGGTAGTGGCTGGTGTGTTAAAACCGGTTCATTTATGAA
GAAAATCAGCAAAagcaaatttgttttaaatgaagTGCCCTGGGGCTACA
TAGAGGATTTGAAATCACACGTCCTCGAAAGAATCGACTTAATTGACGAG
TAAAATACTACTACCACTTTATTAAGATAGATGTTGTGTTTTAACAAAAT
TCTATTCGGCTAATTCACTCCTTCTCCTTTGATAAATCCAATAATAAAAT
TActattcacaaaaaaaaattaaaatattttctttactgTTCAGGGCAAA
AGAATTGAAGTTTGAAGAGTTTATGAAAGATGAAGTGCATGTGAAAATCG
GGGAAGACCATGGTGGTAACACAGGAAAGGCCTGTTATGAGATTTGTAAC
CGAGATTCACCAAACAGTAAAGAAAATACAGTCatattcaattattttga
agaaaaagaccaTCCACTCAACTTGAAAATAGCCTTATCACGATTTAAAG
AACAAATCGACGACCTTCAAAAGTCCAGTTGGAAGTGAGTGTTTACAATA
TTGATCTGAAAATTCTTTTGCAAGCAATGAAATAGCTAAAACTAATCTAG
ATTACTGTGGGCttgtaattgtttttgtttaattAATTGTGAAgttgtct
tttctttttcagtgacAAAAAGATTCGTATGTTTTTGATGGGGGACTACG
AGTTCCTGTGTAATGCATATGGCATTAGTGGAGCAAGTGGTAAATATATG
AAATACGtattataaatatatttttataatacGATACTTGATagataatg
aaaaatgaaatatacaTACAGCAAAGTAATATAATACCTAGTAAATCTTC
CAGTATTATTATCAACTGCTTAGCTTAGCTAAGATTGTACCTTATCTTGG
GAAAATAAAGTTGGGATTTGTTTTGGCCAAAGAAGTTTCACATTTAAAAT
TTACTATTTTCAGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGA
AGAGATTCAAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAA
AGACACTTGATGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCG
AAAGCTAAGGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACC
TCTGACACAggtattgaattgaaaaaacactTTGATTCATTATATTCACC
AATAATATTCCACTTATTTGGTCCAATCAAAATTCACATGAACAATAGTG
GAACTTAATGAAACAACTTTTCTAATCTTTCAGGTTTCAATCCCTGCTTT
ACACATTTCGTTGGGCACATACAAGAAATTTTTCGACCTTTTGGAAGAAT
ACTGTTACCAGCTGGACTTTATGATCGCAGGTTCGACAAGTCAAGCAGAT
GGATTAGAACGGTCCAAAATTGACAAACTTGGTGAAACGTGGCAGGAAAT
CACTCTTTTACGGCAACAGATTCGGGATCTTGATCGCACCATCAATTTGG
TTCATGATGCCATTGCTCAAAACATTGCCAAAGATCCTGCACACGAGAAA
GAAATAAGAGCTGTTTATGAACCCCGTCTGTTACACTTGTCTGACTTGGT
T

Coding sequence (CDS) from alignment at scaffold_407:336623..339223+

>TCONS_00064046 ID=TCONS_00064046|Name=TCONS_00064046|organism=Clytia hemisphaerica|type=CDS|length=11718bp|location=Sequence derived from alignment at scaffold_407:336623..339223+ (Clytia hemisphaerica)
TTGGCAAAGAAATTTGAAGGTAGAGACGATATTGAATGTCCCTCTTGTAG
TACCAAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGAC
TCATTCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAAC
AGTAAGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAGG
TAGCTTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGTC
CGATACCTGCTACGGTCGAACAAGCTACcttgaagattttgaaacataaa
atcGATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAAG
GCCTCGAGTATTCATGTCAACACCGAAACCTGTGAAGCCAACAGCGGAAT
GTTCTTCTCGTCACCAACGCCGCCGAAATAAAGGCATTAGAAAGTCTATT
GAGTTTGCGTCGAAGACGACTATTTCCAAACAGATGGCATCACTATCTAA
ATTCCTTCCTAAAAATCAACGAAAAGATTTCCTGGAGGAAATTGGTTTTG
GTCGGATTGAGATTGACGAGAAAAAAATGCTCTCCCTTAAAATCAGTCTT
GGAATGCCTtgggaaaagttgaaaaagataGGAAGGTTTCTTAGCCAACA
CAATATCAAAACTGGTGGTCACAACAAAATGCGAAATTTGCACAAAGAAC
TGCGTGGTAGTGGCTGGTGTGTTAAAACCGGTTCATTTATGAAGAAAATC
AGCAAAagcaaatttgttttaaatgaagTGCCCTGGGGCTACATAGAGGA
TTTGAAATCACACGTCCTCGAAAGAATCGACTTAATTGACGAGGCAAAAG
AATTGAAGTTTGAAGAGTTTATGAAAGATGAAGTGCATGTGAAAATCGGG
GAAGACCATGGTGGTAACACAGGAAAGGCCTGTTATGAGATTTGTAACCG
AGATTCACCAAACAGTAAAGAAAATACAGTCatattcaattattttgaag
aaaaagaccaTCCACTCAACTTGAAAATAGCCTTATCACGATTTAAAGAA
CAAATCGACGACCTTCAAAAGTCCAGTTGGAAtgacAAAAAGATTCGTAT
GTTTTTGATGGGGGACTACGAGTTCCTGTGTAATGCATATGGCATTAGTG
GAGCAAGTGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGAAGAG
ATTCAAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAAAGAC
ACTTGATGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCGAAAG
CTAAGGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACCTCTG
ACACAgGTTTCAATCCCTGCTTTACACATTTCGTTGGGCACATACAAGAA
ATTTTTCGACCTTTTGGAAGAATACTGTTACCAGCTGGACTTTATGATCG
CAGGTTCGACAAGTCAAGCAGATGGATTAGAACGGTCCAAAATTGACAAA
CTTGGTGAAACGTGGCAGGAAATCACTCTTTTACGGCAACAGATTCGGGA
TCTTGATCGCACCATCAATTTGGTTCATGATGCCATTGCTCAAAACATTG
CCAAAGATCCTGCACACGAGAAAGAAATAAGAGCTGTTTATGAACCCCGT
CTGTTACACTTGTCTGACTTGGTTTTGGCAAAGAAATTTGAAGGTAGAGA
CGATATTGAATGTCCCTCTTGTAGTACCAAATTTTCTCCTACACTGATAA
AGCCGTGCACCGTTAGAACCCGACTCATTCAAACATTGGTTTTGAAATGC
AGATGCGGATTACAATTCAAAAACAGTAAGCTTTTAGACGAACACAAAAA
GGACTGCGTCGGAGAAAAGGAAGGTAGCTTATTAACTGTTCATGAGTTGC
TAGAACTTGATCTCGATGAATGTCCGATACCTGCTACGGTCGAACAAGCT
ACcttgaagattttgaaacataaaatcGATAGCTCAGAAAATGGTACTGC
TGAGTTCCCATCTGGCGGGCCAAGGCCTCGAGTATTCATGTCAACACCGA
AACCTGTGAAGCCAACAGCGGAATGTTCTTCTCGTCACCAACGCCGCCGA
AATAAAGGCATTAGAAAGTCTATTGAGTTTGCGTCGAAGACGACTATTTC
CAAACAGATGGCATCACTATCTAAATTCCTTCCTAAAAATCAACGAAAAG
ATTTCCTGGAGGAAATTGGTTTTGGTCGGATTGAGATTGACGAGAAAAAA
ATGCTCTCCCTTAAAATCAGTCTTGGAATGCCTtgggaaaagttgaaaaa
gataGGAAGGTTTCTTAGCCAACACAATATCAAAACTGGTGGTCACAACA
AAATGCGAAATTTGCACAAAGAACTGCGTGGTAGTGGCTGGTGTGTTAAA
ACCGGTTCATTTATGAAGAAAATCAGCAAAagcaaatttgttttaaatga
agTGCCCTGGGGCTACATAGAGGATTTGAAATCACACGTCCTCGAAAGAA
TCGACTTAATTGACGAGGCAAAAGAATTGAAGTTTGAAGAGTTTATGAAA
GATGAAGTGCATGTGAAAATCGGGGAAGACCATGGTGGTAACACAGGAAA
GGCCTGTTATGAGATTTGTAACCGAGATTCACCAAACAGTAAAGAAAATA
CAGTCatattcaattattttgaagaaaaagaccaTCCACTCAACTTGAAA
ATAGCCTTATCACGATTTAAAGAACAAATCGACGACCTTCAAAAGTCCAG
TTGGAAtgacAAAAAGATTCGTATGTTTTTGATGGGGGACTACGAGTTCC
TGTGTAATGCATATGGCATTAGTGGAGCAAGTGGGCGCCACTGCTGTTTA
CTTTGTCAAGCAACCAAGGAAGAGATTCAAAAGCCAAGAAAAAGTCGAAA
TTGTAAAACAAGAACTCTAAAGACACTTGATGAGAACCtcaggaattttc
aaaaacacgGAAACCTGTCGAAAGCTAAGGAGCATTTCAATGTCATCGAA
GAAAGACTCTTTAACATACCTCTGACACAgGTTTCAATCCCTGCTTTACA
CATTTCGTTGGGCACATACAAGAAATTTTTCGACCTTTTGGAAGAATACT
GTTACCAGCTGGACTTTATGATCGCAGGTTCGACAAGTCAAGCAGATGGA
TTAGAACGGTCCAAAATTGACAAACTTGGTGAAACGTGGCAGGAAATCAC
TCTTTTACGGCAACAGATTCGGGATCTTGATCGCACCATCAATTTGGTTC
ATGATGCCATTGCTCAAAACATTGCCAAAGATCCTGCACACGAGAAAGAA
ATAAGAGCTGTTTATGAACCCCGTCTGTTACACTTGTCTGACTTGGTTTT
GGCAAAGAAATTTGAAGGTAGAGACGATATTGAATGTCCCTCTTGTAGTA
CCAAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGACTC
ATTCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAACAG
TAAGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAGGTA
GCTTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGTCCG
ATACCTGCTACGGTCGAACAAGCTACcttgaagattttgaaacataaaat
cGATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAAGGC
CTCGAGTATTCATGTCAACACCGAAACCTGTGAAGCCAACAGCGGAATGT
TCTTCTCGTCACCAACGCCGCCGAAATAAAGGCATTAGAAAGTCTATTGA
GTTTGCGTCGAAGACGACTATTTCCAAACAGATGGCATCACTATCTAAAT
TCCTTCCTAAAAATCAACGAAAAGATTTCCTGGAGGAAATTGGTTTTGGT
CGGATTGAGATTGACGAGAAAAAAATGCTCTCCCTTAAAATCAGTCTTGG
AATGCCTtgggaaaagttgaaaaagataGGAAGGTTTCTTAGCCAACACA
ATATCAAAACTGGTGGTCACAACAAAATGCGAAATTTGCACAAAGAACTG
CGTGGTAGTGGCTGGTGTGTTAAAACCGGTTCATTTATGAAGAAAATCAG
CAAAagcaaatttgttttaaatgaagTGCCCTGGGGCTACATAGAGGATT
TGAAATCACACGTCCTCGAAAGAATCGACTTAATTGACGAGGCAAAAGAA
TTGAAGTTTGAAGAGTTTATGAAAGATGAAGTGCATGTGAAAATCGGGGA
AGACCATGGTGGTAACACAGGAAAGGCCTGTTATGAGATTTGTAACCGAG
ATTCACCAAACAGTAAAGAAAATACAGTCatattcaattattttgaagaa
aaagaccaTCCACTCAACTTGAAAATAGCCTTATCACGATTTAAAGAACA
AATCGACGACCTTCAAAAGTCCAGTTGGAAtgacAAAAAGATTCGTATGT
TTTTGATGGGGGACTACGAGTTCCTGTGTAATGCATATGGCATTAGTGGA
GCAAGTGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGAAGAGAT
TCAAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAAAGACAC
TTGATGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCGAAAGCT
AAGGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACCTCTGAC
ACAgGTTTCAATCCCTGCTTTACACATTTCGTTGGGCACATACAAGAAAT
TTTTCGACCTTTTGGAAGAATACTGTTACCAGCTGGACTTTATGATCGCA
GGTTCGACAAGTCAAGCAGATGGATTAGAACGGTCCAAAATTGACAAACT
TGGTGAAACGTGGCAGGAAATCACTCTTTTACGGCAACAGATTCGGGATC
TTGATCGCACCATCAATTTGGTTCATGATGCCATTGCTCAAAACATTGCC
AAAGATCCTGCACACGAGAAAGAAATAAGAGCTGTTTATGAACCCCGTCT
GTTACACTTGTCTGACTTGGTTTTGGCAAAGAAATTTGAAGGTAGAGACG
ATATTGAATGTCCCTCTTGTAGTACCAAATTTTCTCCTACACTGATAAAG
CCGTGCACCGTTAGAACCCGACTCATTCAAACATTGGTTTTGAAATGCAG
ATGCGGATTACAATTCAAAAACAGTAAGCTTTTAGACGAACACAAAAAGG
ACTGCGTCGGAGAAAAGGAAGGTAGCTTATTAACTGTTCATGAGTTGCTA
GAACTTGATCTCGATGAATGTCCGATACCTGCTACGGTCGAACAAGCTAC
cttgaagattttgaaacataaaatcGATAGCTCAGAAAATGGTACTGCTG
AGTTCCCATCTGGCGGGCCAAGGCCTCGAGTATTCATGTCAACACCGAAA
CCTGTGAAGCCAACAGCGGAATGTTCTTCTCGTCACCAACGCCGCCGAAA
TAAAGGCATTAGAAAGTCTATTGAGTTTGCGTCGAAGACGACTATTTCCA
AACAGATGGCATCACTATCTAAATTCCTTCCTAAAAATCAACGAAAAGAT
TTCCTGGAGGAAATTGGTTTTGGTCGGATTGAGATTGACGAGAAAAAAAT
GCTCTCCCTTAAAATCAGTCTTGGAATGCCTtgggaaaagttgaaaaaga
taGGAAGGTTTCTTAGCCAACACAATATCAAAACTGGTGGTCACAACAAA
ATGCGAAATTTGCACAAAGAACTGCGTGGTAGTGGCTGGTGTGTTAAAAC
CGGTTCATTTATGAAGAAAATCAGCAAAagcaaatttgttttaaatgaag
TGCCCTGGGGCTACATAGAGGATTTGAAATCACACGTCCTCGAAAGAATC
GACTTAATTGACGAGGCAAAAGAATTGAAGTTTGAAGAGTTTATGAAAGA
TGAAGTGCATGTGAAAATCGGGGAAGACCATGGTGGTAACACAGGAAAGG
CCTGTTATGAGATTTGTAACCGAGATTCACCAAACAGTAAAGAAAATACA
GTCatattcaattattttgaagaaaaagaccaTCCACTCAACTTGAAAAT
AGCCTTATCACGATTTAAAGAACAAATCGACGACCTTCAAAAGTCCAGTT
GGAAtgacAAAAAGATTCGTATGTTTTTGATGGGGGACTACGAGTTCCTG
TGTAATGCATATGGCATTAGTGGAGCAAGTGGGCGCCACTGCTGTTTACT
TTGTCAAGCAACCAAGGAAGAGATTCAAAAGCCAAGAAAAAGTCGAAATT
GTAAAACAAGAACTCTAAAGACACTTGATGAGAACCtcaggaattttcaa
aaacacgGAAACCTGTCGAAAGCTAAGGAGCATTTCAATGTCATCGAAGA
AAGACTCTTTAACATACCTCTGACACAgGTTTCAATCCCTGCTTTACACA
TTTCGTTGGGCACATACAAGAAATTTTTCGACCTTTTGGAAGAATACTGT
TACCAGCTGGACTTTATGATCGCAGGTTCGACAAGTCAAGCAGATGGATT
AGAACGGTCCAAAATTGACAAACTTGGTGAAACGTGGCAGGAAATCACTC
TTTTACGGCAACAGATTCGGGATCTTGATCGCACCATCAATTTGGTTCAT
GATGCCATTGCTCAAAACATTGCCAAAGATCCTGCACACGAGAAAGAAAT
AAGAGCTGTTTATGAACCCCGTCTGTTACACTTGTCTGACTTGGTTTTGG
CAAAGAAATTTGAAGGTAGAGACGATATTGAATGTCCCTCTTGTAGTACC
AAATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGACTCAT
TCAAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAACAGTA
AGCTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAGGTAGC
TTATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGTCCGAT
ACCTGCTACGGTCGAACAAGCTACcttgaagattttgaaacataaaatcG
ATAGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAAGGCCT
CGAGTATTCATGTCAACACCGAAACCTGTGAAGCCAACAGCGGAATGTTC
TTCTCGTCACCAACGCCGCCGAAATAAAGGCATTAGAAAGTCTATTGAGT
TTGCGTCGAAGACGACTATTTCCAAACAGATGGCATCACTATCTAAATTC
CTTCCTAAAAATCAACGAAAAGATTTCCTGGAGGAAATTGGTTTTGGTCG
GATTGAGATTGACGAGAAAAAAATGCTCTCCCTTAAAATCAGTCTTGGAA
TGCCTtgggaaaagttgaaaaagataGGAAGGTTTCTTAGCCAACACAAT
ATCAAAACTGGTGGTCACAACAAAATGCGAAATTTGCACAAAGAACTGCG
TGGTAGTGGCTGGTGTGTTAAAACCGGTTCATTTATGAAGAAAATCAGCA
AAagcaaatttgttttaaatgaagTGCCCTGGGGCTACATAGAGGATTTG
AAATCACACGTCCTCGAAAGAATCGACTTAATTGACGAGGCAAAAGAATT
GAAGTTTGAAGAGTTTATGAAAGATGAAGTGCATGTGAAAATCGGGGAAG
ACCATGGTGGTAACACAGGAAAGGCCTGTTATGAGATTTGTAACCGAGAT
TCACCAAACAGTAAAGAAAATACAGTCatattcaattattttgaagaaaa
agaccaTCCACTCAACTTGAAAATAGCCTTATCACGATTTAAAGAACAAA
TCGACGACCTTCAAAAGTCCAGTTGGAAtgacAAAAAGATTCGTATGTTT
TTGATGGGGGACTACGAGTTCCTGTGTAATGCATATGGCATTAGTGGAGC
AAGTGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGAAGAGATTC
AAAAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAAAGACACTT
GATGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCGAAAGCTAA
GGAGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACCTCTGACAC
AgGTTTCAATCCCTGCTTTACACATTTCGTTGGGCACATACAAGAAATTT
TTCGACCTTTTGGAAGAATACTGTTACCAGCTGGACTTTATGATCGCAGG
TTCGACAAGTCAAGCAGATGGATTAGAACGGTCCAAAATTGACAAACTTG
GTGAAACGTGGCAGGAAATCACTCTTTTACGGCAACAGATTCGGGATCTT
GATCGCACCATCAATTTGGTTCATGATGCCATTGCTCAAAACATTGCCAA
AGATCCTGCACACGAGAAAGAAATAAGAGCTGTTTATGAACCCCGTCTGT
TACACTTGTCTGACTTGGTTTTGGCAAAGAAATTTGAAGGTAGAGACGAT
ATTGAATGTCCCTCTTGTAGTACCAAATTTTCTCCTACACTGATAAAGCC
GTGCACCGTTAGAACCCGACTCATTCAAACATTGGTTTTGAAATGCAGAT
GCGGATTACAATTCAAAAACAGTAAGCTTTTAGACGAACACAAAAAGGAC
TGCGTCGGAGAAAAGGAAGGTAGCTTATTAACTGTTCATGAGTTGCTAGA
ACTTGATCTCGATGAATGTCCGATACCTGCTACGGTCGAACAAGCTACct
tgaagattttgaaacataaaatcGATAGCTCAGAAAATGGTACTGCTGAG
TTCCCATCTGGCGGGCCAAGGCCTCGAGTATTCATGTCAACACCGAAACC
TGTGAAGCCAACAGCGGAATGTTCTTCTCGTCACCAACGCCGCCGAAATA
AAGGCATTAGAAAGTCTATTGAGTTTGCGTCGAAGACGACTATTTCCAAA
CAGATGGCATCACTATCTAAATTCCTTCCTAAAAATCAACGAAAAGATTT
CCTGGAGGAAATTGGTTTTGGTCGGATTGAGATTGACGAGAAAAAAATGC
TCTCCCTTAAAATCAGTCTTGGAATGCCTtgggaaaagttgaaaaagata
GGAAGGTTTCTTAGCCAACACAATATCAAAACTGGTGGTCACAACAAAAT
GCGAAATTTGCACAAAGAACTGCGTGGTAGTGGCTGGTGTGTTAAAACCG
GTTCATTTATGAAGAAAATCAGCAAAagcaaatttgttttaaatgaagTG
CCCTGGGGCTACATAGAGGATTTGAAATCACACGTCCTCGAAAGAATCGA
CTTAATTGACGAGGCAAAAGAATTGAAGTTTGAAGAGTTTATGAAAGATG
AAGTGCATGTGAAAATCGGGGAAGACCATGGTGGTAACACAGGAAAGGCC
TGTTATGAGATTTGTAACCGAGATTCACCAAACAGTAAAGAAAATACAGT
CatattcaattattttgaagaaaaagaccaTCCACTCAACTTGAAAATAG
CCTTATCACGATTTAAAGAACAAATCGACGACCTTCAAAAGTCCAGTTGG
AAtgacAAAAAGATTCGTATGTTTTTGATGGGGGACTACGAGTTCCTGTG
TAATGCATATGGCATTAGTGGAGCAAGTGGGCGCCACTGCTGTTTACTTT
GTCAAGCAACCAAGGAAGAGATTCAAAAGCCAAGAAAAAGTCGAAATTGT
AAAACAAGAACTCTAAAGACACTTGATGAGAACCtcaggaattttcaaaa
acacgGAAACCTGTCGAAAGCTAAGGAGCATTTCAATGTCATCGAAGAAA
GACTCTTTAACATACCTCTGACACAgGTTTCAATCCCTGCTTTACACATT
TCGTTGGGCACATACAAGAAATTTTTCGACCTTTTGGAAGAATACTGTTA
CCAGCTGGACTTTATGATCGCAGGTTCGACAAGTCAAGCAGATGGATTAG
AACGGTCCAAAATTGACAAACTTGGTGAAACGTGGCAGGAAATCACTCTT
TTACGGCAACAGATTCGGGATCTTGATCGCACCATCAATTTGGTTCATGA
TGCCATTGCTCAAAACATTGCCAAAGATCCTGCACACGAGAAAGAAATAA
GAGCTGTTTATGAACCCCGTCTGTTACACTTGTCTGACTTGGTTTTGGCA
AAGAAATTTGAAGGTAGAGACGATATTGAATGTCCCTCTTGTAGTACCAA
ATTTTCTCCTACACTGATAAAGCCGTGCACCGTTAGAACCCGACTCATTC
AAACATTGGTTTTGAAATGCAGATGCGGATTACAATTCAAAAACAGTAAG
CTTTTAGACGAACACAAAAAGGACTGCGTCGGAGAAAAGGAAGGTAGCTT
ATTAACTGTTCATGAGTTGCTAGAACTTGATCTCGATGAATGTCCGATAC
CTGCTACGGTCGAACAAGCTACcttgaagattttgaaacataaaatcGAT
AGCTCAGAAAATGGTACTGCTGAGTTCCCATCTGGCGGGCCAAGGCCTCG
AGTATTCATGTCAACACCGAAACCTGTGAAGCCAACAGCGGAATGTTCTT
CTCGTCACCAACGCCGCCGAAATAAAGGCATTAGAAAGTCTATTGAGTTT
GCGTCGAAGACGACTATTTCCAAACAGATGGCATCACTATCTAAATTCCT
TCCTAAAAATCAACGAAAAGATTTCCTGGAGGAAATTGGTTTTGGTCGGA
TTGAGATTGACGAGAAAAAAATGCTCTCCCTTAAAATCAGTCTTGGAATG
CCTtgggaaaagttgaaaaagataGGAAGGTTTCTTAGCCAACACAATAT
CAAAACTGGTGGTCACAACAAAATGCGAAATTTGCACAAAGAACTGCGTG
GTAGTGGCTGGTGTGTTAAAACCGGTTCATTTATGAAGAAAATCAGCAAA
agcaaatttgttttaaatgaagTGCCCTGGGGCTACATAGAGGATTTGAA
ATCACACGTCCTCGAAAGAATCGACTTAATTGACGAGGCAAAAGAATTGA
AGTTTGAAGAGTTTATGAAAGATGAAGTGCATGTGAAAATCGGGGAAGAC
CATGGTGGTAACACAGGAAAGGCCTGTTATGAGATTTGTAACCGAGATTC
ACCAAACAGTAAAGAAAATACAGTCatattcaattattttgaagaaaaag
accaTCCACTCAACTTGAAAATAGCCTTATCACGATTTAAAGAACAAATC
GACGACCTTCAAAAGTCCAGTTGGAAtgacAAAAAGATTCGTATGTTTTT
GATGGGGGACTACGAGTTCCTGTGTAATGCATATGGCATTAGTGGAGCAA
GTGGGCGCCACTGCTGTTTACTTTGTCAAGCAACCAAGGAAGAGATTCAA
AAGCCAAGAAAAAGTCGAAATTGTAAAACAAGAACTCTAAAGACACTTGA
TGAGAACCtcaggaattttcaaaaacacgGAAACCTGTCGAAAGCTAAGG
AGCATTTCAATGTCATCGAAGAAAGACTCTTTAACATACCTCTGACACAg
GTTTCAATCCCTGCTTTACACATTTCGTTGGGCACATACAAGAAATTTTT
CGACCTTTTGGAAGAATACTGTTACCAGCTGGACTTTATGATCGCAGGTT
CGACAAGTCAAGCAGATGGATTAGAACGGTCCAAAATTGACAAACTTGGT
GAAACGTGGCAGGAAATCACTCTTTTACGGCAACAGATTCGGGATCTTGA
TCGCACCATCAATTTGGTTCATGATGCCATTGCTCAAAACATTGCCAAAG
ATCCTGCACACGAGAAAGAAATAAGAGCTGTTTATGAACCCCGTCTGTTA
CACTTGTCTGACTTGGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040155XLOC_040155Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064046-exon-scaffold_407-1491911889:336623..336974TCONS_00064046-exon-scaffold_407-1491911889:336623..336974Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1510915933:336623..336974TCONS_00064046-exon-scaffold_407-1510915933:336623..336974Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1575043694:336623..336974TCONS_00064046-exon-scaffold_407-1575043694:336623..336974Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1491911889:337100..337383TCONS_00064046-exon-scaffold_407-1491911889:337100..337383Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1510915933:337100..337383TCONS_00064046-exon-scaffold_407-1510915933:337100..337383Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1575043694:337100..337383TCONS_00064046-exon-scaffold_407-1575043694:337100..337383Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1491911889:337565..337771TCONS_00064046-exon-scaffold_407-1491911889:337565..337771Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1510915933:337565..337771TCONS_00064046-exon-scaffold_407-1510915933:337565..337771Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1575043694:337565..337771TCONS_00064046-exon-scaffold_407-1575043694:337565..337771Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1491911889:337917..338156TCONS_00064046-exon-scaffold_407-1491911889:337917..338156Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1510915933:337917..338156TCONS_00064046-exon-scaffold_407-1510915933:337917..338156Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1575043694:337917..338156TCONS_00064046-exon-scaffold_407-1575043694:337917..338156Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1491911889:338285..338361TCONS_00064046-exon-scaffold_407-1491911889:338285..338361Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1510915933:338285..338361TCONS_00064046-exon-scaffold_407-1510915933:338285..338361Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1575043694:338285..338361TCONS_00064046-exon-scaffold_407-1575043694:338285..338361Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1491911889:338586..338782TCONS_00064046-exon-scaffold_407-1491911889:338586..338782Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1510915933:338586..338782TCONS_00064046-exon-scaffold_407-1510915933:338586..338782Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1575043694:338586..338782TCONS_00064046-exon-scaffold_407-1575043694:338586..338782Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1491911889:338906..339223TCONS_00064046-exon-scaffold_407-1491911889:338906..339223Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1510915933:338906..339223TCONS_00064046-exon-scaffold_407-1510915933:338906..339223Clytia hemisphaericaexon
TCONS_00064046-exon-scaffold_407-1575043694:338906..339223TCONS_00064046-exon-scaffold_407-1575043694:338906..339223Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064046-proteinTCONS_00064046-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:336623..339223 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0962837	0	0.055808	0.135895	0.247621	0.0749142	0.0785407	0.147162	0.19448	0.100503	0.272594	0.242207	0.271702	0.248562	0.247024	0.0782246	0.209994	0.205804	0	0.140167	0.154949	0	0.0504533	1.05679	0.609343	0.165918	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR009689DUF1280
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064046 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top