TCONS_00064044 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064044
Unique NameTCONS_00064044
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1702

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064044 ID=TCONS_00064044|Name=TCONS_00064044|organism=Clytia hemisphaerica|type=transcript|length=1702bp
ATAAGTTTTAACGTATTTTCTCAATTTCAAGAAAGATGGAGTCACCGGTG
CTGAGCTGACATTCTCTGAAATCATAAAGAACTCCCGACAACTTGGCTCC
TTTTtccatcaaaagaatttgaaaataaacgAAAGAGTCTGTTTACATTT
ACCAAACTGTATCGAATACTCTTACTCAATGCTCGGAGCGTTAGCAAACG
GTATGGCGGTCACAACAGTCAACCCAGCCTATACTGCCCATGAGATGCAC
CATCAAGTCAAAACATCAACGCCCAAAGTTGTGATCACGACCGCCCATTT
ATTAGATACCGCCCGACAAGCTTCAGAAAACAGTTCGATAGAAACAATGA
TATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAACATGTCG
GATGTCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTGTCAGCTAT
CGATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGCACAACAG
GGCTCCCGAAGGGCGTCATGATCGAACACCACGGCATGACGAGTAACGTT
TTACAAATCCGTGACTTTTTCGGCGAAAACATGCCCAAAGATATCTTAGC
CGTTCTCCCTATGTATCACATCTACggattaaattttattttgttgacaA
ATCTTTACCATGGTAACACCGTACACTCGTTACCAGGCTTCGACCCAGTG
CAATTTTTATCCTGCATCCAAGACAACAAGGAGCGGCGCCAATGGATGAA
GAAGCTACTAAAGCGTTTCGAAGAAAATTCCCAACCATGATTCTGCAACA
AGGTTATGGTATGACAGAGAGCAACATTACTCATCTTCAACCTAATGATG
AATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGCTGATACTGAG
TACAAGGTGGTTTGTTTGGATTCGGGCGAGGCGCTTGGTCCTTACGAACA
AGGTGAAGTTTATACAAGGGGTAGACAGCAAATGTTAGGTTACTTAGACA
ACGAGAAGGCAACAACAGAAACCATTTTGGAAGACGGTTGGCTACGCTCT
GGTGATTTAGGTTACTATGACGACGAGAATAATTTATTTGTCATCGACCG
TTTGAAAGAGTTGATCAAATATAAAGGTTTCCAGGTTGCGCCTGCCGAGT
TGGAAGATTTATTGATTTCTCACGAAAACATTGTTGATAGTTGCGTGATT
GGCGTCCCATGCGAGAGAGCTGGAGAAATACCACGCGCCTATATCGTCAA
AAAGCCTGGTAGTGATTTAACAGAAGATGAAGTGAAAGATTTTGTAGGTG
AACGATTTTCTGATCATAAACATCTCCGTGGTGGAGTACAATTCGTAGAA
CAATTACCGAAATCGGCCTCAGGAAAACTCCTTCGTAGAGTGCTTAAAGA
TCAATATTTGGAGGAGAATGAGTAAGCTTGATTTCATGAGGGGTACTGTA
TATCACTTCGAAGAGAGCGTTATAGAACGGGGATTTCTTGAATTTCcgtg
atttttctgtttgacatTTGGGATTCGGGATTTTCGATTCTGTaactttt
ttagaatttttagatttaatCTTTGGAAAAGTGCGTACCAGATATTTTTC
AAGTAATTTACCCTCGGATATTTGAAAGTACAAAACCATAAAACAGCATT
TGTATTCTGACACGGTCTAAAAGTTGGGTATACATCAAAACCCAATAGAG
TT
Run BLAST on NCBI

transcript from alignment at scaffold_407:272055..280278+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064044 ID=TCONS_00064044|Name=TCONS_00064044|organism=Clytia hemisphaerica|type=transcript|length=8224bp|location=Sequence derived from alignment at scaffold_407:272055..280278+ (Clytia hemisphaerica)
ATAAGTTTTAACGTATTTTCTCAATTTCAAGAAAGATGGAGTCACCGGTG
CTGAGCTGACATTCTCTGAAATCATAAAGAACTCCCGACAACTTGGCTCC
TTTTtccatcaaaagaatttgaaaataaacgAAAGAGTCTGTTTACATTT
ACCAAACTGTATCGAATACTCTTACTCAATGCTCGGAGCGTTAGCAAACG
GTATGGCGGTCACAACAGTCAACCCAGCCTATACTGCCCATGAGATGCAC
CATCAAGTCAAAACATCAACGCCCAAAGTTGTGATCACGACCGCCCATTT
ATTAGATACCGCCCGACAAGCTTCAGAAAACAGTTCGATAGAAACAATGA
TATGTTTAGACGATACGTCAATCTCCGACAGCGGCGTCGTCAACATGTCG
GATGTCTTACAAAACGGCGACGAAAATTTCTCAACTGATCTGTCAGCTAT
CGATCCTGAAAAAGACATTGCTTTTATCTTATACTCAAGCGGCACAACAG
GGCTCCCGAAGGGCGTCATGATCGAACACCACGGCATGACGAGTAACGTT
TTACAAATCCGTGACTTTTTCGGCGAAAACATGCCCAAAGATATCTTAGC
CGTTCTCCCTATGTATCACATCTACggattaaattttattttgttgacaA
ATCTTTACCATGGTAACACCGTACACTCGTTACCAGGCTTCGACCCAGTG
CAATTTTTATCCTGCATCCAAGACAACAAGGTGAGTTTTCGTCATTCTGA
ATAACTTTTGCCGAGCTCTCTCAGATATCAAATACCAACGACCAGCGGAT
TTCAAACAGTCTTTTTCTGGACCAATGAAAGTCATTGTCTTCTTTCGAAA
TGATTCTCGTTTACCTTCGTTTCTTCGATGTATTTTTACGTCTCCTCAGG
TTATATTTAAGAGTAAATCAACCTTAACCCTGGAGtttgagatgccttgg
agtttttacaagctgcttaaaactgattggttatttttaaacaatagaga
tgacgcgttctttagaaaaagtaataaagtcgtttgtctcaacatttaac
gaccaacagagtcatcaaagaacttgtaaaaactccagcatgaCCCTGGA
GTTTCTCAATGCTGGTCAACCAAAGCTCTGGTCAAGTTAAAATTCCAAAT
TATGATAAGCATAAGCTGTATAAACTAATAAGTTgtatccaaaaaaaaat
attacattttAGGTCAGTAGGATCCCGATAGTACCTCCAATTGCCTTATT
CATGTTGAACAACCCAATGGTGGCAAATTACGACTTATCGCACGTCAAAT
CTGTCATCGTAGGAGCGGCGCCAATGGATGAAGAAGCTACTAAAGCGTTT
CGAAGAAAATTCCCAACCATGATTCTGCAACAAGGTATACTTTAATTGGT
TGCTTTGATCTACGTTATCGTCAAGATAATACCATCTCAAGGTGTTTTGA
GTCGATGATATCTCCTCtcagtcaaaaaaatgtttgatatcCTATATACT
TTGTTCCAGTATTGGAGAGATTGACAAACTTGGAGAAGTTTTCCCAGTGA
AACTGATAACGTTTTGATGAAAGGACAAGATAGATAGAGCGATTATATGC
AAAGTTGATGCGTAGAATATTTAAATTGCCGTATAATCTTGTCACCTGTA
GGTTATGGTATGACAGAGAGCAACATTACTCATCTTCAACCTAATGATGA
ATCTCTTCACAAAGCTGGTTCATGTGGTCAAACGTTTGCTGATACTGAGT
ACAAGGTACAATCTCCCTCACATAACTTCATCATAACTGTTGTCTGTTCG
TTGTGCAAAGATGTCCATAATGTGACCCCCTTTTACAGGATATTCTACCC
CAGAAAAGAAAGAtgattgaaattctttttgtcaaacctgtgattatttt
ttaaatgtttttcataaaacacCCCTTTGAAATAGGTAGGCTAAACAATT
ACTACAGTGACAAAAATCTCAGGTCTcgaaaaaatcttaatttttcatca
ttttcaaattttcaaatatatatgaTATATCGAATTATACTCCCCAAAAG
CACCTTTCTAAACGTCGACAATTTACAATAGCATTTAAGAAGGCGGTGAG
GAAATATTGAAAGAGTAAAGTATTCACATACTTTCGAGACAAATTATAAT
AATCTTTCCAACCAACGGAAAAGAATGCTTGCTATTTACTAGCCAGAAAA
GCCCATTTATTTAGTGGTGGATGTCGTTACATTTCTAACATGCCCAAAAG
TATTTATAATAGCGGGACTTCTCCTCGCCTAAAGAACTACGGATATGCAA
ACAATTAACTCGacaacaaaaagattttttaagtaTACAGTAGGTATATC
ATATTGACAATGaatatgaaaaatacaaatgagaatttagattttttttt
cgtttttttttcggttgatAATTGCTCGGTTATTGGAATCGTCTTGTGGA
AGGTGTATTGATGAAGAGATTGTCTTCCCGGGGAGTTGATGGTGGAGATA
AGGCCTCGATGGATGTCATTTCAATTTCGTTGCTAGCCAATGATCTTTCC
AAACAGTCATCCTCGATCAGTTGGTATTCTCCTTCTCCGAGTGTTTTTGG
GAAGGTTTGCGGAGATGTTAAATTTTCTTGATCGTTTTGTGGGTTGACTA
GTGTCTTTGGTTGTTGCTCTTTTTGTGTTTtagtaaatttatttttaggt
GGACAGATCCGCCTCAATGACCTCGGGAGCTGTCGTTTAAGTTTTGAGAG
ATCCTTTTCCACATCTatgatttcattttgaataaaattcatGTTATCTT
CATCAGGGAAAGCATCCTTTTTTAACGATCTGCGTCCCGATTTTAAGAAC
TTTAAATaactctttttgtttttaatttctttttgtagGAAGTCGAGATT
TTCCTCGGCGGAGTTATCTTCCGTAACGTGCTCTGTTTTCGAggtgatat
ttttttcttcggCTCTTGTTTGAGAAGCAGTAACGTCTTTTGTTTGTTTG
CGTGGACAAAACTGCAAGGAAGAGCTGATTTGGTTCAATCTACCAGTGAC
AGTGCAGTATCCATTCGTAACAGTGATAATGTCAAGATTAGGTTCTTGGA
ATGCGCCTTGGCTTTGGCAGTTCCCAACCTCTTTGTTACTGTCACATTCT
GATTCAATTGGTGAGATGAACTTTTCTGCTTTGTCTGATTTCATCCCTTC
TTTATTTGGATCAGCTGGGCTTACATTGAAAGATGGCAGAATTTGACTTG
GACTGTCAGTGGCTATCAGAGATGCATTTTGAATCATGCCTTGTTCGTTC
ACAGCTTCGATTAGTTCTGGTTGCTCTTGGGCTGAAATTTCGCCAATCAA
CTTAATTGAAGGTTCTTCTGATGTGACAGTCTCGACGAACGTATTGAGTT
TCAGATTATCATTTGCTTCGTTTTCAGTGTCTTTCAACAAAGCTAAAGGT
GTGATCGTCGGCTTATCATCCTTAGCACAGGGACCATCACCATCAGAAAA
TTTATCTTTGCCATCGTTTAAATCGCAAGCAGAAGAGTCTTCTACATCAA
TCCGTTGACCATTTGACGCAACAGAAACATTCTCAACAATGCATCGATCA
AACTCCTCATGTTTGACTTCTTCGGAATAGGTTGTTTCGTTTGCAGTGGT
CAAAAGCTCGCTCGAACTTTCTTTCAACATCATCCGTTGGTAATCTCCAG
CATCGGAACTTTCAGAAATCTTTTCTGCGATGACATCATCGTTAGACTGG
TCGGGAGAAATTTGCTCAGTAACGATCAGCTGTTGATCGTTTAACGCGAC
AGGAACATTTTGAACAACTTTATTTTCATCGAAAGATTCCTGTTTGACAC
TTTCAACACCAGGATAAGTTGCATGTGTTTTAGTGATGGTTTGGCCTTCA
AAAACTTTGTCATCAGATCTGGCAGCTTTTGTCTGTTCGACAGCCTTCTT
TTTCGGAAGAGGTTCTTCAGAGACATCTTCCATTTCAACATCAGTGACCT
CACATTTCGTCTCTTTTCCGTGACGTTCAAGATGTTTACCAGTGATAGGC
TCCTCAGAAAGATCCTCCATTTTAACATCATTGTCACATTTCGTCTTTTC
TCTGTGATCTTGTTCAACATGTTCTACAGCGACAGGTTCCCCAGAAAGAT
CCTCCATTTCGATTTCATTGGGGTATGTAGGATCGATCATGAATCGTCTC
CCGAACGATTCGAATCGATCCCATCGTTCCTTAGATGCGAAGGGGATATT
ATCTTCACTTCGATTGAAGTAATCCACTGCTTGTTGGAAAGTTAGAGAAG
CGTAATCTGAAGCCGTGAACAGAGAGGGGAACATTGATGTCTTTTGGGTG
TCTTGCGGCGAGTTGAATGGGTTGGTTGGTGGCGAGTGGAATAAATTGTT
CGGTGCAGAGAAGGGGCTGTTCGGTGGCGAGATAGTGTTTCCATTCATGA
TAATGTTGTATTCATGTTCAATGTGATCGATCATTACTCTCTTTTTTTCT
GGTGTTATGAAAGGGTTGTTTTCTACCGAAGCAAGTTCATGTTGGAGTTG
GAGATATCTTTGGTACAAAGGATGAAATTGTTCTGCAGACATTTCTTCCT
CATCAACTTCCATAGGCTCGACCTGGTGTAGATAAAAAAGAAGGATTGAT
TTTTAACGAGCTTGATGGCTAGGACCGGATATTGTTAAAGAAgtggaaaa
aaaaaagtttgaagaaaaagatctactGGTCGTTGACTCACAACAGAGTA
TAAGGGTTTGATGGCTAAGTATAGTATGGCATAATTATGTGTGTGACCTT
TACTTTATTTTAAAGGATGAGTGTCTTATGTACCTCGTTATAACAATCTT
GGTCGATGTCCATAGGTTCTTCCCCGCACTGCATTTTCACTGGTTGTCCA
CCATAACAGTCCTCGCTTCTCATTGGTTGTTCACCATAACAGTCCTCGCT
TCTCATTGGTTGTTCACCATAACAGTCCTCGCTTTCTATTGGTTGTCCAC
CGTAGCTCTCGCTTTCTATTGGTTGATCGCGAGGATCTATTTCTATTCTT
TGTTGCTGTTTGGCAAGCtgcaaaataaaaatgaattatgtCAATTCTTT
TGACCTAGCTTTTAAAGTGTGTAAGTTGATTGcgagaaaatttctttttt
gaccaAGTAAAAAGGATAATCAGTAGCCCAAGAGCTCAGACGATAAATTA
TAACAAAACCCTTTTTAATAAAAAGCACCATTTCTGTAGTTTAACACGCG
GAAGGAAGACTTTACAAACCTCTACTTGTTCAGCGTGAAAGTCGTAATGA
GTTTTTGTTGGTTGCTCTCCATGTGACAGTGGAGTGGCGACTATATTTTG
TCTGTTGTTGTTTTGTTGCTTCGAGGTTGCGTTGACCGATAGATTCTGTG
AACGAGAAATATCTCGAAGCATCATTTGCATCAGCTGCAATCCTCTTTTG
ATGGTTCGTGTGGTGTAAAGACCACGTTTCTGTGATCTCTTGCAAATTAA
CTTATAACGGCGTCTtgcaagaaaaagtttcttgcgGCGGTTGATTTGTT
GTTGAACGGTGGCTTTCCTGGCGCATATTCTTACGCCGCCAACACGCAAA
GGTACTTTGAAGATCTTCTGCTTCTTTTTTGTTGGTGCCAGTGATTTGTT
TTTTGAAACATCCGTTTGGTGCAAGCTTCTTTTACGATTTTTGGAGTGAT
TTGTATACATTTTTACCAAATAAAATTCGTTATAATACTTATGTAATAAC
TAAAGGACCAGGACATACAAAAAGCTGTATGCACTGACCAGGGTTTTAAT
CCAAAACTGAATCtccaaaatgattttgaaactgtgtaaatcaaaacaat
tatttgacgtcactttcttGATAACATTTGTTCTGACGTTAAAAAATGCA
CGCTGTTTTATTAGAGCGGTAAAAATTTAGAACGCCAACTGTTCTCGAGT
CTTGTACTCTTTGGATTACGGAATAAAATGCGATTCTTCATTAGTAAGTA
AGTAACTATTTATTAGGTAGGTTTAGACCGGATTCTTATACATCTCAACA
AACTCAAAACCACTCCCTCAGCTTGCCATAGATTATCCACTGTGTCACAA
ACCACGCTCTTtagcaaaaagaatcaaaacCGCGTCgctttttgctcaaa
aaatgaagaaaacaaaaacgaaagtgaacgtgaacgaaaacgaaagcgaa
tgtgaaagcgaaagcgactgtACATAATATGGACGCTGTAAATTTAGATC
TAGATTGTGTATCGTTTATTTCGAGACATTCTCTGTATGAATTTGATTAA
CATAATTTATttcatttgcatttttttgacagGTGGTTTGTTTGGATTCG
GGCGAGGCGCTTGGTCCTTACGAACAAGGTGAAGTTTATACAAGGGGTAG
ACAGCAAATGTTAGGTATGATATGgtttacgttttttttaatcCGATTTT
CTCCTCCTTTTAGCACTTTTGAGTTTCCGCCAAATTTCGAGTTCTCCTTA
GCTCGGATAAATTCGCAGACTTTCAGAGACTTCTTATATTTAACATTCAT
CCGCCATTCGGTTGAAGAAACTTCTAAAGCAATACCGCCCACTACCGCCC
ACCTGGGCAGATCCTTACGGGGCTTGCGAAGTAACTAGGATATTCTCGGA
GATTACCTTCGATGCGACTGCATTACCCGTTGGGTTCAACCATCTCcaat
tttttgagtttaaaactGGGACTGGACCACTGGAGTCGACAAGTCCCCAA
AAGGAAGGGACGGGTATAAGCCCGTTTTCGGAGTATTTCAGAAAATAAAT
AATCAGAAACCTTTTACGAAGAAAACTGTAATCTAGTTAAACCGGCTCAA
AGATTCTCAACCTCTCGCTTTCAGGTTACTTAGACAACGAGAAGGCAACA
ACAGAAACCATTTTGGAAGACGGTTGGCTACGCTCTGGTGATTTAGGTTA
CTATGACGACGAGAATAATTTATTTGTCATCGACCGTTTGAAAGAGTTGA
TCAAATATAAAGGTTTCCAGGTatactttgaaaatattttcgcaGCTCAC
AAAATGACTTTTTCAGCTCATCCGATAGAGAATTCGCTTTAAAACCGATC
TGCGATCACCGCAAACTCAGCGAATGAGTCGCCTGGATCAGATAATCTGA
TCTAAGCCCTAAGTTATTTAGAGCTGAGGGTAGTTGCGCTCCATCCCAAC
CCCTAATCTAGCGCAAAAATGAAAATGGCGGCAGACTCCGTCACTCCTGG
CTCCACCGATAAACTGACTTACTACTAACTCTTTGTATTCCAAAGAATTC
CTCATAGTTTAAGCTCCGAGCCAAAGGGAAATTCCTTAACGCGTTTTTCT
GGTGCAGAGAGTTTAACGCCGGTCAGGTACATACCAGTTTCACTAGATTT
CCATTGCTATAACATATTTGCAAATATTTGTTTCAAttccttttaaattt
tgattttaccaGAAAAGAGATTTCGAGTAAGTGAGTGACAAGGTTGTTGG
TCATTCCAAACagttaaacttttttgtttcccTCTAGGTTGTGCCTGTAA
CTTTTGCGGTTGCTGGATGAAAAAGCGAAATGGTCCACAGTGTTGTACAA
TATGttctgaaaaatcaaaaaaattcatagTTTCAATGTTTTTTCTGTTT
ATTTAGGTTGCGCCTGCCGAGTTGGAAGATTTATTGATTTCTCACGAAAA
CATTGTTGATAGTTGCGTGATTGGCGTCCCATGCGAGAGAGCTGGAGAAA
TACCACGCGCCTATATCGTCAAAAAGCCTGGTAGTGATTTAACAGAAGAT
GAAGTGAAAGATTTTGTAGGTGAACGATTTTCTGATCATAAACATCTCCG
TGGTGGAGTACAATTCGTAGAACAATTACCGAAATCGGCCTCAGGAAAAC
TCCTTCGTAGAGTGCTTAAAGATCAATATTTGGAGGAGAATGAGTAAGCT
TGATTTCATGAGGGGTACTGTATATCACTTCGAAGAGAGCGTTATAGAAC
GGGGATTTCTTGAATTTCcgtgatttttctgtttgacatTTGGGATTCGG
GATTTTCGATTCTGTaacttttttagaatttttagatttaatCTTTGGAA
AAGTGCGTACCAGATATTTTTCAAGTAATTTACCCTCGGATATTTGAAAG
TACAAAACCATAAAACAGCATTTGTATTCTGACACGGTCTAAAAGTTGGG
TATACATCAAAACCCAATAGAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040154XLOC_040154Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064044-exon-scaffold_407-1491911889:272055..272784TCONS_00064044-exon-scaffold_407-1491911889:272055..272784Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1510915933:272055..272784TCONS_00064044-exon-scaffold_407-1510915933:272055..272784Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1575043694:272055..272784TCONS_00064044-exon-scaffold_407-1575043694:272055..272784Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1491911889:273367..273438TCONS_00064044-exon-scaffold_407-1491911889:273367..273438Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1510915933:273367..273438TCONS_00064044-exon-scaffold_407-1510915933:273367..273438Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1575043694:273367..273438TCONS_00064044-exon-scaffold_407-1575043694:273367..273438Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1491911889:273706..273809TCONS_00064044-exon-scaffold_407-1491911889:273706..273809Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1510915933:273706..273809TCONS_00064044-exon-scaffold_407-1510915933:273706..273809Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1575043694:273706..273809TCONS_00064044-exon-scaffold_407-1575043694:273706..273809Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1491911889:278387..278468TCONS_00064044-exon-scaffold_407-1491911889:278387..278468Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1510915933:278387..278468TCONS_00064044-exon-scaffold_407-1510915933:278387..278468Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1575043694:278387..278468TCONS_00064044-exon-scaffold_407-1575043694:278387..278468Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1491911889:278929..279074TCONS_00064044-exon-scaffold_407-1491911889:278929..279074Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1510915933:278929..279074TCONS_00064044-exon-scaffold_407-1510915933:278929..279074Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1575043694:278929..279074TCONS_00064044-exon-scaffold_407-1575043694:278929..279074Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1491911889:279711..280278TCONS_00064044-exon-scaffold_407-1491911889:279711..280278Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1510915933:279711..280278TCONS_00064044-exon-scaffold_407-1510915933:279711..280278Clytia hemisphaericaexon
TCONS_00064044-exon-scaffold_407-1575043694:279711..280278TCONS_00064044-exon-scaffold_407-1575043694:279711..280278Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:272055..280278 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.653488	0	0	0	0	0	1.05427e-07	0.66347	0.311284	0	0.508716	0.537768	0.0466563	0.77017	1.12169	0	0	0	0	0.096526	2.00441	0	1.25176	0.401995	0.834794	2.05942	0	4.5469e-05	3.08537
Blast
[Close]
BLAST of TCONS_00064044 vs. Swiss-Prot (Human)
Match: ACSF2 (Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 6.894e-21
Identity = 68/228 (29.82%), Postives = 109/228 (47.81%), Query Frame = 1 
Query:  730 GAAPMDEEATKAFRRKFPTMILQQGYGMTESN---ITHLQPNDESLHKAGSCGQTFADTEYKVVCLDSGEALGPYEQGEVYTRGRQQMLGYLDNEKATTETILEDGWLRSGDLGYYDDENNLFVIDRLKELIKYKGFQVAPAELEDLLISHENIVDSCVIGVPCERAGEIPRAYIVKKPGSDLTEDEVKDFVGERFSDHKHLRGGVQFVEQLPKSASGKLLRRVLKDQ 1404
              +P   E  +A   K     L   YG TE++     H  P D    KA S G+    TE +++ +++G        GE+  RG   MLGY    + T E + +D W  +GD+   +++    ++ R K++I   G  + PAELED   +H  + +  V+GV  +R GE   A I  K G + T +E+K F   + S H  +   + FV   P + SGK+ +  L++Q
Sbjct:  383 AGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFAHF-PEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIRLKDGEETTVEEIKAFCKGKIS-HFKIPKYIVFVTNYPLTISGKIQKFKLREQ 608
The following BLAST results are available for this feature:
BLAST of TCONS_00064044 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACSF26.894e-2129.82Acyl-CoA synthetase family member 2, mitochondrial... [more]
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