TCONS_00064042 (transcript) - C. hemisphaerica

Overview
NameTCONS_00064042
Unique NameTCONS_00064042
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1487

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00064042 ID=TCONS_00064042|Name=TCONS_00064042|organism=Clytia hemisphaerica|type=transcript|length=1487bp
GAGTATTACGAGATTCAAGGTATCAAAATGCTGTTCAATTATTTAACCGA
TACACCTGTTGCTCCTTTGCAAAGAGATTTAGTGGAAATCGAAGAACCAT
TGTGTAGCGATATCGATTTTTCGTTcttcgaaaacaaagaaactgCAATT
AGTCTTGCAGCTGATAATGTACCAAAGGAAAACTTGGATGGCATAAAAAC
TAAGTATGTATAAGAGCGTTATTCAACAAAAATGCTTTTTGGGNTGTACC
AAAGGAAAACTTGGATGACATAAAAACTAATGTTCTTGAGATCCTTGGAA
ACATTGCATCAGGGAAAGAGGAGTTCGACATGGAAAGGATGAAAGCGCAG
ATTCACCGATCTGTTCTTGAAGAAATGAATGCTGTGGAAGATTCACCTCA
CGACACGCTAGCTTTCTTATCAATCGGCGATTTCTTATACTCCACCAAAA
GTGATACCATGCAAGAGTATGTGGACAAAATCAAACATTTACAAAAGTTG
AAAGAAGAACCGGTGTCTTATTGGACTGATTTGATGAAGAAATATCTGAT
GGATCAAAAGATGGTGGTCATCATTGGTGACCCGAGTGAAGAAAAAATGG
AGAAGTCTGGTGAGGAGGAGAAAGCACGTGTTAAAAGACAACGTGAGGAG
CTAGGTGAAGAAGGATTAGCCAAGAAAAAGAAGATCGCTGATGATGCGAT
CGCTGAAAATTCGGTTGAACATCCGACAGAATTAATCACACAATTGAAAG
TCCCCTCAACAGACAGTGTCACTTTCCACAATGTCAACTCTTATCGAAAC
TACTCACCTGCACAACCAGCAAACTTCGAAGCTGCCAAGAAGTTCCCTTT
GGATGGGTTCCCTGCTGCATTCAACGTCTGCCATGTGCAATCTCTCTTTA
CACAGATTTACATCGTTATTGACTCAGCCAAATTGTCCAACGAGCAAAGG
ATGCTGTTACCTCTTTATACCGAACTCTTATATGAATCTCCCATTCTCAG
AAATGGaaAGGTTATTCCATACGAAGAAGTAGTGAAAGAGTTGGCAGCAG
ACACTTTGTACACTGATGCTGGTATTGGGATTGGTGGTGGACGCTTCTCC
CCAGGCTCCTTTTCCTCAACTGTTGTACTATCTTTCAAGGTTGAAAACGA
TAAATACGAGAAAGGCGTTCGTTGGGCAAGAGACGTTCTTTATAATTTAC
AGTTCTCTACTGATCGAATCAAAACGTGTGCTAATAAGATTGTCAAAGAT
GTGCCTAATCACAAACGAAACGGGCGAAGGGTTGTCAAAAGTTTATTGGA
CGATATCACTTACAATAAAGAATCGAATGTCTATGCAGGAAACATGGTTC
GACAACACGATTTTTTGAGCAAACTCATCAAAGATTTGGATCAAAACTCC
TCACAGGTAAtctagactggcacgccagtcgggctggaacggtatcacgc
gggaaaagtgagcgtaggagttaggtaagcgtaagaa
Run BLAST on NCBI

transcript from alignment at scaffold_407:187381..203363+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00064042 ID=TCONS_00064042|Name=TCONS_00064042|organism=Clytia hemisphaerica|type=transcript|length=15983bp|location=Sequence derived from alignment at scaffold_407:187381..203363+ (Clytia hemisphaerica)
GAGTATTACGAGATTCAAGGTATCAAAATGCTGTTCAATTATTTAACCGA
TACACCTGTTGCTCCTTTGCAAAGAGATTTAGTGGAAATCGAAGAACCAT
TGTGTAGCGATGTAAGacatttattatttttctcattGTATTTAATTTCT
ATTTGCATATTAATTAGTACAAAATTGTATCCAGAAATTATTCTGCCTTT
GATCTCTTGATAATTAATTCAATTTGCTTAGGTTCATATCTGCTTTCCGA
CAAGGACAATCAGGCAAATTATACAATCGAACCAAATTGAACTAATTGAC
CATTTGATATTGGACTAACAAACACTCCCACAACAACTGCCCCCCCCTGA
AAGCTCTATTTTGTTTACTCATTTCAGATCGATTTTTCGTTcttcgaaaa
caaagaaactgCAATTAGTCTTGCAGCTGATAATGTACCAAAGGAAAACT
TGGATGGCATAAAAACTAAGTATGTATAAGAGCGTTATTCAACAAAAATG
CTTTTTGGGNTGTACCAAAGGAAAACTTGGATGACATAAAAACTAAGTAT
GTATAAGAGCGTTATTTAACAAAAATGCTTTTTGGGTGATGATACTTTCA
TCGAATCTAAACCTAAAACTTTTCTTATTCCACTGAAGAATCTATTGTCC
ATGTTACGTTATGCGTGAGATACAGGTACAGGTACAGGTACATAGTAAGG
GTCAATTGTTTTGGAAAGCTTGTAATGTAATATAAAAAGGTTGTGTAGAA
AACcatcctgaattttattatcaaTCTCCTTCTATCGACAGTGTTCTTGA
GATCCTTGGAAACATTGCATCAGGGAAAGAGGAGTTCGACATGGAAAGGA
TGAAAGCGCAGATTCACCGATCTGTTCTTGAAGAAATGAATGCTGTAAGT
CACCTTCCACTGAACAATGTCAAACTGTAACAACTCCCTTACATTTGAAC
TCCCTTCAATCAATGAGTACCAACATCTTTACACTCAGTTCCATCTATTT
GACCCCCACACAATGTATTGACAAATTATGCTTGAAGCATTGTGAAATGT
AACCGCCAAACTCCCctaattttctttgtatttttctttgcattttctca
gtgttaaaagttcttctgTCCCAGACAGATTTCCGTTTCAGTGAAATGTA
TAAATAggcttttccgtctcaaaattcttAACAATTNTCCCAGACAGATT
TCCGTTTCAGTGAAATGTATAAATAggcttttccgtctcaaaattcttaa
taatttaccaaaatttcaagagaACATGCTAgtaatttgctgtgtaaaat
taATTTCCCGTCTCAGACGACTGATTGATCTTCTCTCCCGTTGGACAGGT
GGAAGATTCACCTCACGACACGCTAGCTTTCTTATCAATCGGCGATTTCT
TATACTCCACCAAAAGTGATACCATGCAAGAGTATGTGGACAAAATCAAA
CATTTACAAAAGTTGAAAGAAGAACCGGTGTCTTATTGGACTGATTTGAT
GAAGAAATATCTGATGGATCAAAAGATGGTGGTCATCATTGGTGACCCGA
GTGAAGAAAAAATGGAGAAGTCTGGTGAGGAGGAGAAAGCACGTGTTAAA
AGACAACGTGAGGAGCTAGGTGAAGAAGGATTAGCCAAGAAAAAGAAGAT
CGCTGATGATGCGATCGCTGAAAATTCGGTTTGTATTGTATGCCATTCTT
TCCCATCTATGTGTTGAAATTTTTGTCGTTGCTcatttgtttcttttata
tcTTATGATCTTATGACTTGAATTTACTTCAAAAGAAATGAATTTCTAAT
GcggtattttttaattttcatggcttttcttaaaaaaaaagaatcttaAC
ACTGCTTTTTTTCTACCTTAGGTTGAACATCCGACAGAATTAATCACACA
ATTGAAAGTCCCCTCAACAGACAGTGTCACTTTCCACAATGTCAACTCTT
ATCGAAACTACTCACCTGCACAACCAGCAAACTTCGAAGCTGCCAAGAAG
TTCCCTTTGGATGGGTTCCCTGCTGCATTCAACGTCTGCCATGTGCAATC
TCTCTTTACACAGGTTTGTCACCTGTTACCTTTTTTTCGCTCTTTCTACA
GTCGATCCGTTATCTATAATACAACGGATACCCCCATAACTCAAACacct
ataactcgaatgtctccttaactcgaacctaattcataactcgaaaatta
ataattcgaacaaatttgcatTACCCTTGCGCTTTCAAGTTATGGCGAAG
CGACTGTAAATCGTTGGGAAGGAACTTGTCTGCGTCATAATAAATGGAAA
ATGCccataaaaaagataaaaaactaaaacaacAGGCACTCCTtagtact
ctgtaccagagtgtatctcacgtttatcgcttcatagtacactctgtgcg
cgtTGTCTGTTTGATATAAGAAAAATTCTCGTACGgtgacctctgcgatg
aagtatgactTATAAATAGCAGCACTTCTCTCATCGCCttccctctctca
ccaacactccatcgcagcggtcggtttgaaaagccaataaatgacaacag
accctctacacCAATAAATTGAATAAGGTTTTGAAAAGTCCCCCCCTCCC
CATTCAGGCGAGTAGTCTAACCACACAAAGCATGGCAGTTGTTTATGATT
ATCGCAAATCTTATTTTCTAGATTTACATCGTTATTGACTCAGCCAAATT
GTCCAACGAGCAAAGGATGCTGTTACCTCTTTATACCGAACTCTTATATG
AATCTCCCATTCTCAGAAATGGaagtaagtgtttatttttttatattgtg
TTGCCAGGAGACATAACATGAATCATGTAATTGCCAAATCTCTCCTGGAC
GAGATGCTATAAACTGTATATCCGAGCGAAAAATTACAATTTGAGATCTT
TGGAGGctttttctttactttcttttttccaATTCATCAATTTCTAGGCG
AAACTTTGAACTTTTACGAGGAATATTTTTGATGTCGCATTTTAGGACTC
TATTTgtactaccgggtgcgccacaaaaaagtttctctctttgaaactga
ttttctcgaaatcgaaaaatttcaaaagaatcattcctattcctttggaa
agaagaaagataaacttaaattttgaggggtcatttaataaattcggttc
attagatcaaaagttatgctcaattgaaaaacaaagttaCTTTCAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNgaaagtgcccgaaaacgttaaaaatcgac
ctatcaaagttttattttaaaactagcaatcgcaataggctttacatgat
taagaacatttttcagtaatcaaaaacataaattttgaaactgatgggtC
AAAAGGGTTTAGAGtcctcatcaaaatcattttaatttacttttaccgag
attttcttcagatttttggttgtagactggataaagtctaggctggatgt
acctcgaaaccaatatttgatgtatttgtactggagccttatccGCGTGC
TGGCCTAGCAGACGAATAAGACGCAGTGGGTGAGTGAGTCTAGACTACGA
AAGGGGCGGGCTAGAGGAACCTAGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcttttttcataaaaaaatt
cctgAAAGATACTGAGaaaaggtcaaatttaaaaatctcttcTCTCGAAA
AACTTGAAAGCATATGTTTAATTTCAGGTAGAGTGCCTGGACCCCTTAGT
CGACAGATCTCTCCACTCGGCATACGACACTCAAAATTAGCCACTGCATG
AGCGAATTCCTATCGAATTTCGCAACCCACGCGATTAGATCAGCAGCGTC
TAATTAGAATTAAACTCTGATCTAATATACAAACATCGTTCGTTTTGTTT
AATCAGGTGTTTGTTTTGTTCGTTTACAAACACCTGTAGTCTAGCGGCTT
CAATTTTCGTTTATCAAACAATCTCTACACACTTGCTGCattaactgaaa
aaaatttctaattttctatttttgcgaccaaaagttcaaaaaaaacaaaa
aaaattgaaaaaaactaaaaagagaaaaaaaaatatctgaaacTTTTGGC
CCATACTTCGGGTTTAAAACCTGGACGCTTGGGTCCCGAAGTACATTGTC
CACTACCCATAGTGgaatgaaaatctcaatattCTCAAATCACATCTCCG
TGAAATCATTTACTCTAGATGTCTCAATACATCAGTTACTACAGGATCTC
AATATCCTCAAATTATATCTCAATAAAACCGTAAANTGAACTGGGGATGC
GTCCTATCGCCCACCCGATGGTTTAGAATCCCGAACCTTATTTTGTTTGC
TGGTATAGCTTGAAACCGCTTTTGATTAGGGATATGCAGTAAAAGATAAC
CTTCCTTACAGGTCCATGCGATGGAATTCTACAGAGTATCTGGAACCCCA
CCCCAAGAAAGGAAGAAATCCTATAGAACCCTTTCCCTAGACTCGGGAGT
GATTTCTTAATTCTTTAGCTTCGGGTGAAAAGAAAAGTAATCATTAGCCA
GTAAGGCtttaagaaacaaaagaaagaccaCTGTTTAATTTCGTTGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAAGTTGCTGCCCAGTGGA
GCGTGGAAGGCGTAGTTGGGCGTTAGAAGGGCGCTAGATACGATCAGTAA
AGGTATAGCCGAAGGAACTTTAGTAcatatttttctgaattttacaagat
cttttggcttttttcgacaaattttcttccttttaatgtACTTCAACcat
cctttatataacaaaaggtcattttagacaactaattataatttttgatg
actaaAACGAAATTACTGATGCATCATTATGCtgtaattatgcttctttt
tgatttgataggtcaatttttaacgtttttgagcacattcagaaagtaaa
ttttttattcgattgagcataactttcaatctaatgaaccaaatttaata
aatgacccatcaaaatttaagtttatctttcttctttccaatgggatagg
aatggttcttttagaatttttagatttcgagaaaattagttttaaagaga
gaaacttttttgtggcgcacccggtagtaatctcatggttatgagggaaa
ttcgggataaatctcccgaggtcaattttgaaattttttgagatttaaaa
catttcgaaatttgaccgagggtaatttatccagaatttcacgaaaacaa
gcgtGTGATTTCTGGTTAATCTCAAGGTTTGGATTTTAActctaacaatt
ctgaaagacgtcaatttaacacttgaaatcaatttgaaactttaaaaaga
ggtctcaaaaaagtcatagaaacgcgaatCCATTTAAGCCttcgaagtta
gtaagaaattcgaaaaaaggtgacgaatttccaaacgatggaaatttcac
ttttgcggggaattacaaaatctaggagagaaattacaaaagcttggagg
gaaattacaagttcgcgggaaatttcaaaatcttcgAAGGCCGTAatggg
aaatttgaattttatgagCTTAAAATCAGACGAATTCATTATGCCGAGCG
GACGCAGTCTAGAGTGAGTGGAACGAAGGCTAAGAAAAAACATCGTAGAT
GCGTCCTATAAGTGATGCAAATGGAATATAATAAGTAAATGTCAATTTTG
TAAACGCCACCTGTGACGtagattgttttcttttttcgaaaTATAAACAT
GAAGTAAACTATGATATGAACATCAATAAAATCCTAAGtaaataaaaatg
taaataaaatgttattttccTCTTCTTCCTCTACCTCTGTAGTAACCTCG
TCTTGGTGGTCCGTTCAGGTTGCCTAAACGAGAAagtgtttttgagtttt
gtcGCATTAAACTTGTTTAACACTGTAAAGTAGGGAGGTGGGATGGGAAT
GAATTCGTCTGATTTTAAGctcataaaattcaaatttcccatTACGGCCT
TCGGCCTAGGAAAATATCGCTTAAAATCAGACGAATTCATTATGCCGAGC
GGGCGCAGTCTAGAGTGAGTGTTCACTTAGGCTTGCGGAACGCCGGCTAA
GTCCTTGTTTAAAGCTTCATTGTCCTTTAGGAGCAAGTTTTGGTACTTTT
CTGCTGTACTAAAGTTTTTGTTGTAGAATTTCTGCCATACTGACGTGTTA
GACCAATTACCCATTTTTAGAATGTCTGTTATTTTTGCTCCCTTTTGGTG
TGCTTTGGAGGTTGAGGCTGATCTCTTAGAATGGGCTTGGAAAATGGCAG
TGTCTATGCCTGCCATCTTTAGCATTTCTTTGACCCATCTGGCTGTCTTT
CCCAATGGGCTTGTGTGGTTCAACATAACTTAAGAACAACTTCGATGTTT
TATATCTGTCTCTGAATCTTTTTGTGATATAACTTGTTAAAGTATTGTAA
GGGCATAGTTTAATCAAATTTCCTGAACTCAATGGGTTCTGCTTTCTTCC
CTTGTTTGAAGTGTTTTGGAGGATTGTTTAAGTGGAAAATAATAGTGGAG
TCCGACCTTCCCATTAGCTTTATGTCCAAGTTTGTTAGCTCGGAGCCCCT
GTCAGGTGCTAGTATTCCTAAAAAAGTGTTATTGTTTTTAGTATtatctg
accactcccttataTAATTGAGCACAGTGTCGATATCCCTTATTTCAGTG
TATTTGGGGAGCTGGGGTCTTTGTCTTGAGACTCCTTTTAATAGAGAGGT
GACCATGGGGTGTTGTCCTGCAGAGGCAAGCCCTCAACTAGTTGGTGATA
GAACGAGATGGCTGACCTATGTACATTTATGGTGCTATACTCTTTCCCTT
CTTCAAATAGGGTACCTAAGTAATTGGCCACTTTCTCTATAGGGGCTGAA
ATGGGATCAGTTTCCTCCCTATCACACCAGCTGCTGAAGCTTTTCCAGGC
TGACAGGTAATGTTTTCTAGTTCCCTCTGCCTTGGACTGTTGGATAAGGG
AGAAGCTGCTTGTGATAGTTTGCCTGAAAGCTTTTGTTTCCTGAGATTTC
CCATACCGCTAGGTGGAGGGTTTAATTCAGTATTAGAGGGTGGATCTCCC
CTGATGGATGTGTTAAAATGTCTTCCCTCATTACTATCTTTCTTGGGTTT
GATATTAGCATTCCCAATAAGACTGGGTACCAAGTTTGAGTCGTCCAAAT
TGGGGCCACTAGGATCACTGTTGCTTTGGATCTCCTTACTTTTTCCAGAC
ACCTCCCTATTAGAGGGAATGGGGGAAAAGCATACACTAGGTTTTGGTCC
CAGGGTTGGTTCAGTGCATCTACTGCTAGACAGTGTTGGTCTGGTTTCCA
ACTGTAGTAAGTCTGTTGTTGGTGAGAGGTTCTTGAGGCAAAAAGATCGA
TTTCTGGGGGTCCCCACACATTCATTATGTGTTTGAACGTTTGCCTTGCT
AGTTTCCAGTCCCCACAGTCTTTTGCATTCCTGGACTCGAAGTCGGCCTC
CTTGTTTAGGGTCGAAGGAATATATTCTGCAGTGAGGCTGATGTTCTTTT
GGTTCAAAAATGAGCAGATCTCTTAGGCTTATTAGGGTAGAGTTTGTCGG
CCGACCCATTTTCACAATGTGTACCAGGGCTACTTGGCTGTCTATCAGTA
GATGTACTGACCTTAGGTGATTCCCCTTTATAAAGGTTTTCATTGCTATC
AGGGTTGCTTTCATTTCTAGGATATTTATGTGTTCCCTTTTCTCTGACTC
TGTCCATAGCCCTCCTGTGGAGCTTTGACCACAATGAGCTCCCCATCCCC
CCATTTTTCCCTTTGCCGCATCTGAGCTTATAATTAAATCTGGGGGACGA
ATGTTTATGTCCTTGCCGTTTTCTGAGGAGAAGTTTCCTATCCACCACTT
TAACTCTTCTTTTGCAGTGTTGTCTAGTTTCATCATTGAGCCGTAGTGTT
GTTTGTTTTTCGCTAGCTGTTTGTTCATGCATTTTTGCAAGAGTCTTATT
TGAAGAGGAGCTAGAGTAAAGGCTGGAGCTATTGCCATTAGATTCCCTAT
TAGGCTTGCAAGTTTCCTTATAGGGAAGCTCTTCAGATTTAGCATTTGGA
cacaaagttttttcaattttagcattttctcCTGAGGGACTTTGAATATC
ATGCTGGAGCTGTCTATCAGTACCTCCAGGTATTCCATTTGTTGACATGG
TGTCAGTACAGACTTCTCTATGTTGATTGTGAATCCTAGGTTCTCCAGTA
AGAAGATCGTTGTGTCTCTGGAGAAGATGGCCTCCTTCTTTGACCTTGCT
ACAATCAGGATGTCGTCTATGTAGATTATCAGTTTTATCTGTTATCTTCT
CAATAGAGAAATGGGCACCTTGAGAAGTTTCGTGAATATTTTGAGAGCTG
GCCCTAGTCCAAACATTAGGCATTGAAACTCGTATAGGTTTCCCTCCCAG
CTGAATCTCACATACTTCATGGACTGTGGGTGTATTGGGACAGAAAAATA
TGCATCTTTCAGATCCACTTTGACCATGAAGTCCCCCTTCTAAAGAATGT
TCTTTACATCGCTTAGGGtctccatcttgaatttttggtATGGGATATGA
GAGTTGAGTTCCCCTTAAGTTTATCACAGGTCTGAATTTCCCTggttctt
ttttctctttcaaaAACGGAATGGACAGGACCTGGCCTTGCTTGTAAAGA
ACTCTCTTTACAGCCCCTTTTTCCAGTAAAGTTCTTATCTCTGCCCGTAT
TAGAGCTTTCATATTTAAGTCGAAATTTATTTGCCTTGGTGGTGTCTTTT
GAATTGGTTTTCCCATTACTGGGATTGACAAGCCTGAGATGGTCTCCAGG
ATGCATGGGTCTTGGGTTATTTTGGCccaattcttttgaaataattttgt
tttgccAGCAATCAATGTTGACTGGGGTACTATTATCTCTTCTAGGAGAT
TTTCTATCCCTTGGTGTATTTTCCCAGGGTAGTGTGTTTGAAACTCTTAC
CTCTCCATTTTACAGCTCGTCTGGGAAGAGCCCCATGAAAAGGGTTTCCT
CTTTTGGTCCTGTAGTCGTCTGGAAAATATGTATTGTTTAAGAGAAGTGT
AGTCTGCTGCTTTGGATTGTTTTGTTagagttttccacattttctcTAAG
GCAAGTGGAGCAAAAATGTCTCGTATCTTGGATGATATCCGAGAAATAGA
TTTGTCTACGGCTAGGGTTTTAGTTCCCATGTAGCCTTTCTCTTTCAGTA
GGGTGTCAGTTAAAGTGCCCATTTTTAATGTATTCGACACATTAGAGGGA
ACTGGTATTTCTTCCAGCACCATTGAAGAAATATCTTTATCTGATATATA
CTTTGTGATGTGACCGTTCAAATATTGGGCTAGTCTTTGTTCTAGCATCC
AGTCACTACCATCCTCTTTCATTTGAAATAAGAGAGGTTGTTCACGTTCT
GGTGACTTTGTAGGGGATTTACTTCTCCTTCTACGTTTgttcttggattt
tttcttcctttttcgaCGTCTTCTTTCTTCTGATGATGACGAACTGTTTG
TACGATGCTGTTTGTATCCGACGAGGAACTCTCTGAAGATGAACCGGAAG
GAGATCTTTGTCTCTTTTTGTGTTTACTGTAAGTTCTTCTTCCTTCCTCT
CCAACTTTGGGATCAGTTTCTGCTACGATGCccttgattttactcgattc
AGTTGCATCATTCACTTTCGGTGCAGCGGATTTATCCGCCATCTTGTTCT
TTGAGCAGCGAAAGTGAAAGAAGGACTTAGTCGGCGTTCCGCAAGCCTAA
GTGAACACTCACTCTAGACTGCGTCCGCTCGGCATAATGAATTCGTCTGA
TTTTAAGCGATataaaattacaaattaacgcaAGCAAAAACGTcattcga
atttcaatcaaccacgAGATTATAAAGAGTAACTTgggtttttaaacttt
tggagaAAGAATTTCCAGGAGTAAAAAagtatagtatagtatagtaaAAA
ATATAGTTCCACTTGATTAGAGTTTTCACAAGTCAGATTTGCAATAAAAC
TCCCTATCAAATAATTTTGTTATAGAGGTTATTCCATACGAAGAAGTAGT
GAAAGAGTTGGCAGCAGACACTTTGTACACTGATGCTGGTATTGGGATTG
GTGGTGGACGCTTCTCCCCAGGCTCCTTTTCCTCAACTGTTGTACTATCT
TTCAAGGTGAGTGAAATTTTTTGTAGCTTCGACCAATCGCTGGCACCTCT
CCTGGTATTTTTCTCATTGATGACTGTGATTAACATTTTCGAACTTATTG
GCTTTGATCCAAAAGAATGGCATACTCATTTGCTATGTGATTTGACTTAA
CAATGAAAGGATTTCATCATTTTATTGCTTAGTTAAGTTACTATTAAAAG
TCCAGTTTTTAGGGAAATTATTGAAACAAGATGCCCCAAGTTGCTcctaa
aactttttttctattgtaGGTTGAAAACGATAAATACGAGAAAGGCGTTC
GTTGGGCAAGAGACGTTCTTTATAATTTACAGTTCTCTACTGATCGAATC
AAAACGTGTGCTAATAAGATTGTCAAAGATGTGCCTAAGTAAGTACCCAC
CCACCTCTTTTGCTGAGGTATGTTTCAAGTATCTGGCATCGAGCAAAAAG
AATTTTGTGCACTGACTCGTTTCTACTTATTATAACCTTGGGACAAGAAA
TATGAGTTCATAAAGTTATCTTTGAGGGCAGCTGATTCAGGCTGATTCGC
TTAAGttaattttcgagaaaaaaatatttttaacttggAGTAATTTAGGG
GTATTTTTTTGGCTGGCACAATGAAAAGTAATTCAGGTTGTACCTCCTTT
ATGTTCATTTAACGTGATACAAAGATTCAAATTTCGTCGAATCgcaaaag
atttttattgcGAATAAGATAAGCTCGATTCGGGAAATTGATTCTCAATA
AATTAAAAGTTTGGCGAATTTGCTTAATCACGATAATCTTTCCCCTAAAG
TAGTTAGTTCTCTTGCTCTTTCTCCTGAAAGGCGAGTAATAAGCACCTTT
TCTTATAATGTCTCACTTGGGCATGTGGAGAAGGAATTAAATTTCGTAAA
AACATTAACATTTCAGTCACAAACGAAACGGGCGAAGGGTTGTCAAAAGT
TTATTGGACGATATCACTTACAATAAAGGTAAAGTTGACTTTTCATTTCA
TGATTTTAAAAGCATAATTAAATTGATAATCAAGAATTATGTTTTATTAC
AATATATAGCCTGAACTCGACTAtcttacaaaatgaaaaagattgtaACG
AGAGTCAACATAGTTTTGTGAAAAGAGACTCTAATATGTCAAATAAAGCA
AAATAGTTTTTCTTAAGTTCGGTGCTAGGTTTTTTCAAGGCCAAGCTCGT
CCATATTTCCTTTCAATCTTCTGTGTTGGTTGTTCTGGTGAATTTTCTTC
GCGTTTTCCGGTAATCCAATATCTTGGACGTGATTCCGCCGTACTtctgt
tttgttgttgtttacgCACGATCCTTTCTGTATTTCCATAACATTCTTTA
CTGAAAAACCAACAACGAAATGGGGACGATTCCTTTCGAACATTCGAGCC
TTTATCAGTCGCAACTTTATCTGCCATTTTGAAAGGgaggaaaatttttc
ttttttcgatgtttttcgTTCTTTTGGTGCAAATCGAAGGCAATAGTAAA
AGGTATATGAATAGAAGAATGAAAGATTTTCTCATCAACCTGTCCATTGC
TCTCTCCAAACTCGTTTGAATTCTGATTTTGGTTTAACCCTTAATTATCT
TAACTTTAtatgaatacacgctttttcttttataagaatatcttctatag
gaatatcagggtgaaaattggccaaatcgtaagaataccctaagaatacc
ctaagaataccctctagggtgagtttcacagaatttgattaGAATACAgt
gattttgtatttggttaacataaaaaagctgcttcctttgttagacttga
atttaaactttgaggcagaaatgtaaCTTTAGCAccaaatgttcattcaa
aagtccaaaactctcaaattgatcatttctcgtGTTTgtaaaaagtcaag
tctaaaaaagtaagaatacgttaagaatatttcaccctcaattttggcaa
tttattaagaatacttgaccctcatccaaagtacactatccttataaaaa
atagcGTGTATGAAGAaaagttattttgcaaaaaattgagtaaaaaggTG
CTAAAATATTTTCGCTCCTGCTATATCCTCTCGCTAATTCATCGgttttt
tttgtcgaaaatAGTTTTTCTGTTTTGATTGAACTCAAGCATTATTTTGA
GTTCTTATTAACGTCCAAAGTTCTATTTTCGCAAGCTAAATTTCGTAATT
TTCACCAGTTACAGTGACAAACAAAGTTATATAAATATAGATCAAAACTA
GAAATATGAATTAAAAAACTTGGtgttgggaatttttttttcatttcaaa
taaaaCTATATTACATTTCAAACGCTTCCTGCCCTCTTCATTTCTTCTTG
TCGCATTTTCCGCCATTTTTGACGTCACACAAAGACTGCTCTTGGTCTCC
GATTTCATTCCATTCCCTGAAAGAGAGCATATCATCGATATCACGTAGAT
CGGACACTTTCTGTAACAAATCTTTGACCGCCTGTTCGCGCAATTTCATC
AGGCCGCTTAACATTTGATCTCGATCCGCCTTTTCTTGGACATGTCTCTT
CCGCCCGATTTTTAAGAAGCCTTCAGCGGGCGGTAGAAACAAATTGATCG
ATAGTGTTACCAAAAGAGCTGACGTTAGCAATTTCTCGCACGTTTGACGA
CCTGAAATAAGAATATCGAAGATTATTTCggtaaaataactttttaaacg
TATTAGAAAAGCCCCCCCCAGTCTCCCTAGACCATGTTTTTGAAATCTGA
GCACTACGGAACCTTGGGGAAAGGCTTGtcaaaaaaactttctaaaagAC
AAGAAGAAGCCTAAGAAGGGTAAACAATAAACAGAGATTCACATAGAAAA
GAATCGATTTTTAAAACTTCGATTGTTTAGATACCTTTCTTTCGTTGAAA
CATGATGATCTGTAGGACACCAGCCACCTCAAACTTTCCTTCTCTTGAAT
TGTCTACTGCTCCCTGTTGTTTTCACTGCATCTCTACTGCCTTCCTGTCG
CTTACTTATGATGATGGTAATTCACAACAACTGTTTCTTTCCCAGTGTCA
AAATCTCTATTAGTGATCAATTCTTTATGaagaaatatatattttacact
aatttttcactgtttcaatttttcaatgtaAAGATTGCGAATTGTTCAAT
TATTGTGAGagaaaaattgttgattttttcTGTTTGATGCTCTAAAGGAA
CGAATGAttgattgaatgaatgaatgaatgaatgaatgaatgaatgaatg
aatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaa
tgatagAATGGATTAGTGACTGagggaatgaatgaatgaatgaatgaata
tacTTTTTTCCTACAGAATCGAATGTCTATGCAGGAAACATGGTTCGACA
ACACGATTTTTTGAGCAAACTCATCAAAGATTTGGATCAAAACTCCTCAC
AGGTAAtctagactggcacgccagtcgggctggaacggtatcacgcggga
aaagtgagcgtaggagttaggtaagcgtaagaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040152XLOC_040152Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00064042-exon-scaffold_407-1491911889:187381..187491TCONS_00064042-exon-scaffold_407-1491911889:187381..187491Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:187381..187491TCONS_00064042-exon-scaffold_407-1510915933:187381..187491Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:187381..187491TCONS_00064042-exon-scaffold_407-1575043694:187381..187491Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:187758..187926TCONS_00064042-exon-scaffold_407-1491911889:187758..187926Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:187758..187926TCONS_00064042-exon-scaffold_407-1510915933:187758..187926Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:187758..187926TCONS_00064042-exon-scaffold_407-1575043694:187758..187926Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:188172..188274TCONS_00064042-exon-scaffold_407-1491911889:188172..188274Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:188172..188274TCONS_00064042-exon-scaffold_407-1510915933:188172..188274Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:188172..188274TCONS_00064042-exon-scaffold_407-1575043694:188172..188274Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:188729..189058TCONS_00064042-exon-scaffold_407-1491911889:188729..189058Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:188729..189058TCONS_00064042-exon-scaffold_407-1510915933:188729..189058Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:188729..189058TCONS_00064042-exon-scaffold_407-1575043694:188729..189058Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:189252..189443TCONS_00064042-exon-scaffold_407-1491911889:189252..189443Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:189252..189443TCONS_00064042-exon-scaffold_407-1510915933:189252..189443Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:189252..189443TCONS_00064042-exon-scaffold_407-1575043694:189252..189443Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:190052..190154TCONS_00064042-exon-scaffold_407-1491911889:190052..190154Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:190052..190154TCONS_00064042-exon-scaffold_407-1510915933:190052..190154Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:190052..190154TCONS_00064042-exon-scaffold_407-1575043694:190052..190154Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:199706..199836TCONS_00064042-exon-scaffold_407-1491911889:199706..199836Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:199706..199836TCONS_00064042-exon-scaffold_407-1510915933:199706..199836Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:199706..199836TCONS_00064042-exon-scaffold_407-1575043694:199706..199836Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:200100..200218TCONS_00064042-exon-scaffold_407-1491911889:200100..200218Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:200100..200218TCONS_00064042-exon-scaffold_407-1510915933:200100..200218Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:200100..200218TCONS_00064042-exon-scaffold_407-1575043694:200100..200218Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:200747..200808TCONS_00064042-exon-scaffold_407-1491911889:200747..200808Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:200747..200808TCONS_00064042-exon-scaffold_407-1510915933:200747..200808Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:200747..200808TCONS_00064042-exon-scaffold_407-1575043694:200747..200808Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1491911889:203197..203363TCONS_00064042-exon-scaffold_407-1491911889:203197..203363Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1510915933:203197..203363TCONS_00064042-exon-scaffold_407-1510915933:203197..203363Clytia hemisphaericaexon
TCONS_00064042-exon-scaffold_407-1575043694:203197..203363TCONS_00064042-exon-scaffold_407-1575043694:203197..203363Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:187381..203363 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.6028	11.1721	2.30303	2.63595	20.8691	18.9011	22.27	20.8337	13.6911	22.0018	19.5742	10.2551	13.5756	12.1322	12.2774	16.0776	14.9994	14.4255	6.28088	8.27781	8.14506	6.44241	13.4751	12.1292	18.1774	15.7611	6.25856	6.46679	8.44739	9.87834
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00064042 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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