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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063983 ID=TCONS_00063983|Name=TCONS_00063983|organism=Clytia hemisphaerica|type=transcript|length=5275bp
aattattttaattcattcgactttttataaaaatatatgattttaatgat
tttagtaGTTAGCTATTTATGAAAAATATACGTAAAAAAGGCATGAAATT
AGACGTTTCACTCACTTTTAGTCCGCAATTTAACCATATCTTGCATTCTA
GAGGTATATTTAACCTCATTAGAGGACTTGTTTCTTTAAAAGAGCGCTAA
GGTTCCATCACAGTTATAGTGATAACTATTTCGCGCGCCTTTTATTTTTG
TGCACATGACAGCTACCACACAAAACCAAAAAGCTGAATCTAAAGGAATT
GACAAACTCCGAGAGTGGTCAATTTGATTCGTAATTCCCAATTTATTTAT
AGCGTTAAGCAATCCGCACGTGGAAAGAACGACGAGATATTGCTTCACTT
CACAAAGTCCCTGGGTCTTGATATAAAAAATTCacgaagaaagagaaaaa
gaagtCGGAAAAAGTAACCACGATTTAATGGCTTGGAGGAGGCTTGTAAC
ATTTTTACATGAACCAATATGTTGGTCGACAGGATATAAGTATGTTATAA
TTTGCTTATaatttattcaataaatttatAGTTAAATTCATTATTATTTA
TAAAATGTACTTTTTTGTGCCAGAATTGAGGGTAGAggagactttaaaaa
aaaacaccacaGAGTCGTCAGAACAATGCAGTTTCACGAGATCTGTTCCG
AGGAATCTGTCAAAAAGTGTAACATGACTCCGCTAAGTAGCTTTCCCACG
TCAACCACACTATGGAAAACCTCATAAAATGTCAACCATGACGACCTTCA
AACAGTGCTTCAGAAAACTACACTTTTAAAACTCTAAACCACTATAAATA
GATGGTGTTTGCGTCTTTCTGCACCGTTTATCCAAGATTTAAGTATATTC
AAGCTTTACTGAACGATTGGATGATTATAACAACGATATCACTCATGTGT
AAAACATAGCCGAACTCGAAAAATAGCGTTAAAATACTCTTCATCAAAAA
ATGTCTACAAAAGACACGTTCAAAACGCTGAGGAATAAATAAATCCGGCA
TTTGCTGGTAATACTTCATCGAATTCTAATTTTATTCCGAATTAGCaaga
taaatcttttttattttagattaaTATGTATGTATGAGTCGAAAGCAACT
CTTTGTACGCGGCTTGAAATCAGAACAAAGATGGATTCTGCTCAACAGTC
AGTCACATGTACAATTAGAactttattgataaaaattatttgaattaaAC
CCAGCTAATTTTGCACGGAATGATGGTTTGTTGATAAATCCATGTCTTAC
CACTTTTCTGTATTATATATCAACCTACATATCAATTGCGGAAATATCAC
ATGATtgttttataaaaatgaaaaggcACTCGATTTGTTTATAGAAGACT
TTGCACCGACTGATTTGTGTTACACATCTTACACTTAAACTGAGGAAATT
CTATCTATATTTTTGTTGGCCTGGAAGGAATATGTGCTTGTTATGCTTTG
ATTGGAATGATGTTTTGCAACGGCGTGTATAAAGGCATAGGAGGAAGTGT
GACTTGATGGATTCTTCAAGCGGATGGAAAAGGAGAAACGAGTGAATATC
GTACATAAGCCAAAGAAGAACTTTGcgtgaaaaaacaacaacaagatAAC
CAGTTCCCTAAAACATAAACGAAGATATGGTGCTACATCTCAAAAATGAA
GTGGACATGATCATgatcaaaaaatttatttgcaaCAAGAAGGCTTACAC
ATACAATTGGTACAACCAAATCTGATGATGAGGAGTTCGAGAAACTTAAC
GAAATGGCTAAGGAGTCTGGTGATTATAACGACCCAGCTATCATTCAACG
TTTAGAGTTTTTAATTGAGGGATTGTTACCTACACATTCTATTAGATGGT
TTATTATTGGAGCTTTTGGTCCCGAAGGGACGTGTGACATTCATGATAGA
CATTGTAAAGTGGTTGGTACTTGTGACATTCCCAACAAGAAATTGAGAAT
TGATTTAGAGCTTATGTCTCCTTCACAACAGATCTTTGAAGAGACAGTTG
CCGACGTTGTGCAATCGCCCGTAGTTACACCTCAACAAGTTCGTCCTGTA
CCCGTTTTCAATGCACCCGAGAAGGTAACTGACGCAGAGGAAACAGAAAC
CTATCCACATTCTGCTACCCGTTCTTGTACTGCCGGTTCGTTAGAAGGAG
TAGTCCCAAAACGAAGACGTTTATGTTTTTCCGATAGTTCGGACGATGAA
CCTGAGCCGATTAAGACACCATTGGACGATATAGACAAACAGTTGGTAAA
CAAACCCGATGTTATCAATTTGTTCCCAGAAGATGACAACCTATTCGTTG
AGGTACCGGATTCACTTTTATCTGTCCCTCCTCGTTTCGTTGATTTCGTT
ACCGATGCCCCTCCACAAGACAAGTGGTTTAATTTGGTGGAAACTATACG
CCATAAGCTAGAACATTGCAACGACGTCACTTCCGCGGCATTACGCAACT
GTAGAGATTTACCCTTGCCAAGTTTTCAAGCAAATGCAGATAAACATTTG
GACATTCGTTCACTTCGAGTTTTAANAAGTTTTCAAGCAAATGCAGATAA
ACATTTGGACATTCGTTCACTTCGAGTTTTAATGAATTTGATCGAAaata
aaaacttattctttcgAGATATGGAATCAATAGGATTTACAGCTCCCGAC
AAAGATCCAATGGTCGCTGTCAGTGTAAAGTATAACGGAAGTCCGTTCGA
TTATCCTGCCTGGGTAAAACATGAGAAAATTATAATAGGTGACCATCATT
CATTTTCAGACGATTCAAGAGGAAAGACTGTTGTGGGATGTAAGGACAAA
GCATGGCACACCCATGAGGTCATCCTACAGCCTGCCGCAGCTAAGAACTC
CGTCCAGCTCAAGCAAAGAGAACGACACACCCGAAAGATATACTGGCAAC
ACATGGTCAAAAATTTCAAAAAAACAGACACTGTCAAGGATGCTGCATTC
TCGCGTTCAGGTCTCTATACGGATTCCATGTACGATGTCCTGTGTGCGAC
GACGGCATCCTTCACTGGAAAAAGGAACGCCCTGAGGAAATTTTTGCAAC
AATCCGCTATGTCACCGCCAGAAGATTGCACGGACAAGAGCAGCACGAAA
AGCTCTTCTCCAGACCCGTCGCTGGAACGGCCCTCAGCAAGAAGCTCGCA
AAGTTGGGCTATCAAGTGGAATCCCCTTGCGGCATCTCAACCATTAAAGC
GATCCAGAGGGGTATCACACACGCTGGCGTACAAGCAATATTTCCGGACA
CAAAATATTAAGAATTGCAAACATTACGATTATCTTATTGCAACTGACAC
TGAATTACAACGATTGGAAAACTTAGTTCCATCAAACCAAATAGAAACAA
TTAAAAAACAAATGTTTAACCAGCATGTTGCTGACGAATTTGTACCCTAT
TCTGATATGATTAGTAAAGTAGAAGATTATGACGAAACAGAAGGAAAAGT
ATTTTCTAAATTTTGGACTTCTTTTTTAACCACGGTTGCGTCTCAAAATG
GAATGACTATAGAAGATATGATTTCCGAAATGTTTTCTATTTTGTCTTTG
GAAAAACCTAAAAAGTCTACAATATTTTTGTTGGGTGCTAGTGATTCGGG
AAAATCATTTTTGGCTAGATTGCTAACGTCTGTTTGGCCGAAATACGACG
TGGGTGTAATTGCTACAACATGTGGTAGACCTTCCGACTTTTGGCTCCAA
GATTGCCTCAATAAGCAAGTATACAGGTCTGAAGAAGTTAGATTTGGCGA
TCAGGACGTGTTCCAACGGTGGAAACAACTTATGGAAGGGAACGATATGT
TGGAGACGCAAATTAAATACGGATCGTCGAAATTTATACCGAGAAGACCT
GGTGTTTACACTGCCAATGCCGAATACAAGGAACAAATAACTGAACTTTT
TGATCAGGAGTTTCAAACCGTACAAAATCGTTGTCTATTACTTATGTTAA
ATCAGAATTTAACGACTATCATACCACCTTTTGTATTAGAATATGTAAGC
AAACGGAATGCAAAAGCAATGAAATATTTGTCGCGAGTCAGTCGGCACGC
AACGGAACAGTCGGCTGGTACGAGTACAATATACGCCCTTATGAGCATCC
AACCACCACCACCCCAATGCAAACCCAAACCCAAACCCAAACCCACAACA
ACAACAAAAAGAAATTCAACCAAGTCAAGAGAGCGAGATCGACAGTTTTT
TCGAGGAAAACATCAGCTACATATCACTGATGACAGACGATGATTTGTTT
CCCAGCTTACAACAAGAGGAAGCGGTGGAAGAAGAAGCGAAAACGGACAA
TGAAGAAAGTTCTCTGCCTGGTGCCCCCCCAACGAAAAAGAGAAGAACAG
TCAACCAAGCGGTGCGGATGCTAAAAAGGGAGCTCCATAATTCCTTCTCC
CAGCACGAGTTGGCGACACACCGTTTCACAGCGGTGAATCGTACCTTCAA
AGGTCAAGAAATCATTTGCGATGCGCTGTCGCCGACTCGGCTGAATAGGG
CAATTGCCAAAGTCGACCAAAAACAACCTTTGAATATGGCTGACATTAGA
GCAAGAAATGAATTGGGCGAAACCGTAAACCAAAAATGTAGGGCAGCCGT
GAGAGCCACGAAAAagctactttaatcgtagaaattttagcgagactaaa
tttagcgttttagcgagttttccctattttcgctaaaataaatctcgcta
aaacacgctgaattgacagatcgctaaaatttacccgcgcgaaatttctg
gttatattgccttgatacatttttatcaagtGGAAATAATGTTTTAGTAC
AAAGAAACGCAAGAAAACAagttcagtcaataatgtaatacgagtattct
gactcgctaatatacgctaaaattagtcccgctaaaatttctacgattaa
agtataaaTTTTATAACATCATTgttctacacgctttttttataagaata
cactttacaTGACCATTCATcatgaaaatggctaaaaatttaagaaatat
gctaaaaatatcaccatcatggaatttggaaaCTGAAGCTAATATTAATG
CCATTtgtagagcattttcaattataacctaagaatgtaagaacattttt
gaatgattttcccaaaaaagttacaaaaagaaTACCCATGAtgatacacc
attcttataaaaaaacgtttagtagggggcattttcaaatttcgacacac
ttcacgtttttttattagaacgcag Run BLAST on NCBI protein sequence of TCONS_00063983-protein >TCONS_00063983-protein ID=TCONS_00063983-protein|Name=TCONS_00063983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=829bp
MAKESGDYNDPAIIQRLEFLIEGLLPTHSIRWFIIGAFGPEGTCDIHDRH
CKVVGTCDIPNKKLRIDLELMSPSQQIFEETVADVVQSPVVTPQQVRPVP
VFNAPEKVTDAEETETYPHSATRSCTAGSLEGVVPKRRRLCFSDSSDDEP
EPIKTPLDDIDKQLVNKPDVINLFPEDDNLFVEVPDSLLSVPPRFVDFVT
DAPPQDKWFNLVETIRHKLEHCNDVTSAALRNCRDLPLPSFQANADKHLD
IRSLRVLXSFQANADKHLDIRSLRVLMNLIENKNLFFRDMESIGFTAPDK
DPMVAVSVKYNGSPFDYPAWVKHEKIIIGDHHSFSDDSRGKTVVGCKDKA
WHTHEVILQPAAAKNSVQLKQRERHTRKIYWQHMVKNFKKTDTVKDAAFS
RSGLYTDSMYDVLCATTASFTGKRNALRKFLQQSAMSPPEDCTDKSSTKS
SSPDPSLERPSARSSQSWAIKWNPLAASQPLKRSRGVSHTLAYKQYFRTQ
NIKNCKHYDYLIATDTELQRLENLVPSNQIETIKKQMFNQHVADEFVPYS
DMISKVEDYDETEGKVFSKFWTSFLTTVASQNGMTIEDMISEMFSILSLE
KPKKSTIFLLGASDSGKSFLARLLTSVWPKYDVGVIATTCGRPSDFWLQD
CLNKQVYRSEEVRFGDQDVFQRWKQLMEGNDMLETQIKYGSSKFIPRRPG
VYTANAEYKEQITELFDQEFQTVQNRCLLLMLNQNLTTIIPPFVLEYVSK
RNAKAMKYLSRVSRHATEQSAGTSTIYALMSIQPPPPQCKPKPKPKPTTT
TKRNSTKSRERDRQFFRGKHQLHITDDRR Run BLAST on NCBI transcript from alignment at scaffold_404:672474..677748 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063983 ID=TCONS_00063983|Name=TCONS_00063983|organism=Clytia hemisphaerica|type=transcript|length=5275bp|location=Sequence derived from alignment at scaffold_404:672474..677748 (Clytia hemisphaerica)
ctgcgttctaataaaaaaacgtgaagtgtgtcgaaatttgaaaatgcccc
ctactaaacgtttttttataagaatggtgtatcaTCATGGGTAttctttt
tgtaacttttttgggaaaatcattcaaaaatgttcttacattcttaggtt
ataattgaaaatgctctacaAATGGCATTAATATTAGCTTCAGtttccaa
attccatgatggtgatatttttagcatatttcttaaatttttagccattt
tcatgATGAATGGTCAtgtaaagtgtattcttataaaaaaagcgtgtaga
acAATGATGTTATAAAAtttatactttaatcgtagaaattttagcgggac
taattttagcgtatattagcgagtcagaatactcgtattacattattgac
tgaactTGTTTTCTTGCGTTTCTTTGTACTAAAACATTATTTCCacttga
taaaaatgtatcaaggcaatataaccagaaatttcgcgcgggtaaatttt
agcgatctgtcaattcagcgtgttttagcgagatttattttagcgaaaat
agggaaaactcgctaaaacgctaaatttagtctcgctaaaatttctacga
ttaaagtagctTTTTCGTGGCTCTCACGGCTGCCCTACATTTTTGGTTTA
CGGTTTCGCCCAATTCATTTCTTGCTCTAATGTCAGCCATATTCAAAGGT
TGTTTTTGGTCGACTTTGGCAATTGCCCTATTCAGCCGAGTCGGCGACAG
CGCATCGCAAATGATTTCTTGACCTTTGAAGGTACGATTCACCGCTGTGA
AACGGTGTGTCGCCAACTCGTGCTGGGAGAAGGAATTATGGAGCTCCCTT
TTTAGCATCCGCACCGCTTGGTTGACTGTTCTTCTCTTTTTCGTTGGGGG
GGCACCAGGCAGAGAACTTTCTTCATTGTCCGTTTTCGCTTCTTCTTCCA
CCGCTTCCTCTTGTTGTAAGCTGGGAAACAAATCATCGTCTGTCATCAGT
GATATGTAGCTGATGTTTTCCTCGAAAAAACTGTCGATCTCGCTCTCTTG
ACTTGGTTGAATTTCTTTTTGTTGTTGTTGTGGGTTTGGGTTTGGGTTTG
GGTTTGCATTGGGGTGGTGGTGGTTGGATGCTCATAAGGGCGTATATTGT
ACTCGTACCAGCCGACTGTTCCGTTGCGTGCCGACTGACTCGCGACAAAT
ATTTCATTGCTTTTGCATTCCGTTTGCTTACATATTCTAATACAAAAGGT
GGTATGATAGTCGTTAAATTCTGATTTAACATAAGTAATAGACAACGATT
TTGTACGGTTTGAAACTCCTGATCAAAAAGTTCAGTTATTTGTTCCTTGT
ATTCGGCATTGGCAGTGTAAACACCAGGTCTTCTCGGTATAAATTTCGAC
GATCCGTATTTAATTTGCGTCTCCAACATATCGTTCCCTTCCATAAGTTG
TTTCCACCGTTGGAACACGTCCTGATCGCCAAATCTAACTTCTTCAGACC
TGTATACTTGCTTATTGAGGCAATCTTGGAGCCAAAAGTCGGAAGGTCTA
CCACATGTTGTAGCAATTACACCCACGTCGTATTTCGGCCAAACAGACGT
TAGCAATCTAGCCAAAAATGATTTTCCCGAATCACTAGCACCCAACAAAA
ATATTGTAGACTTTTTAGGTTTTTCCAAAGACAAAATAGAAAACATTTCG
GAAATCATATCTTCTATAGTCATTCCATTTTGAGACGCAACCGTGGTTAA
AAAAGAAGTCCAAAATTTAGAAAATACTTTTCCTTCTGTTTCGTCATAAT
CTTCTACTTTACTAATCATATCAGAATAGGGTACAAATTCGTCAGCAACA
TGCTGGTTAAACATTTGTTTTTTAATTGTTTCTATTTGGTTTGATGGAAC
TAAGTTTTCCAATCGTTGTAATTCAGTGTCAGTTGCAATAAGATAATCGT
AATGTTTGCAATTCTTAATATTTTGTGTCCGGAAATATTGCTTGTACGCC
AGCGTGTGTGATACCCCTCTGGATCGCTTTAATGGTTGAGATGCCGCAAG
GGGATTCCACTTGATAGCCCAACTTTGCGAGCTTCTTGCTGAGGGCCGTT
CCAGCGACGGGTCTGGAGAAGAGCTTTTCGTGCTGCTCTTGTCCGTGCAA
TCTTCTGGCGGTGACATAGCGGATTGTTGCAAAAATTTCCTCAGGGCGTT
CCTTTTTCCAGTGAAGGATGCCGTCGTCGCACACAGGACATCGTACATGG
AATCCGTATAGAGACCTGAACGCGAGAATGCAGCATCCTTGACAGTGTCT
GTTTTTTTGAAATTTTTGACCATGTGTTGCCAGTATATCTTTCGGGTGTG
TCGTTCTCTTTGCTTGAGCTGGACGGAGTTCTTAGCTGCGGCAGGCTGTA
GGATGACCTCATGGGTGTGCCATGCTTTGTCCTTACATCCCACAACAGTC
TTTCCTCTTGAATCGTCTGAAAATGAATGATGGTCACCTATTATAATTTT
CTCATGTTTTACCCAGGCAGGATAATCGAACGGACTTCCGTTATACTTTA
CACTGACAGCGACCATTGGATCTTTGTCGGGAGCTGTAAATCCTATTGAT
TCCATATCTcgaaagaataagtttttattTTCGATCAAATTCATTAAAAC
TCGAAGTGAACGAATGTCCAAATGTTTATCTGCATTTGCTTGAAAACTTN
TTAAAACTCGAAGTGAACGAATGTCCAAATGTTTATCTGCATTTGCTTGA
AAACTTGGCAAGGGTAAATCTCTACAGTTGCGTAATGCCGCGGAAGTGAC
GTCGTTGCAATGTTCTAGCTTATGGCGTATAGTTTCCACCAAATTAAACC
ACTTGTCTTGTGGAGGGGCATCGGTAACGAAATCAACGAAACGAGGAGGG
ACAGATAAAAGTGAATCCGGTACCTCAACGAATAGGTTGTCATCTTCTGG
GAACAAATTGATAACATCGGGTTTGTTTACCAACTGTTTGTCTATATCGT
CCAATGGTGTCTTAATCGGCTCAGGTTCATCGTCCGAACTATCGGAAAAA
CATAAACGTCTTCGTTTTGGGACTACTCCTTCTAACGAACCGGCAGTACA
AGAACGGGTAGCAGAATGTGGATAGGTTTCTGTTTCCTCTGCGTCAGTTA
CCTTCTCGGGTGCATTGAAAACGGGTACAGGACGAACTTGTTGAGGTGTA
ACTACGGGCGATTGCACAACGTCGGCAACTGTCTCTTCAAAGATCTGTTG
TGAAGGAGACATAAGCTCTAAATCAATTCTCAATTTCTTGTTGGGAATGT
CACAAGTACCAACCACTTTACAATGTCTATCATGAATGTCACACGTCCCT
TCGGGACCAAAAGCTCCAATAATAAACCATCTAATAGAATGTGTAGGTAA
CAATCCCTCAATTAAAAACTCTAAACGTTGAATGATAGCTGGGTCGTTAT
AATCACCAGACTCCTTAGCCATTTCGTTAAGTTTCTCGAACTCCTCATCA
TCAGATTTGGTTGTACCAATTGTATGTGTAAGCCTTCTTGttgcaaataa
attttttgatcATGATCATGTCCACTTCATTTTTGAGATGTAGCACCATA
TCTTCGTTTATGTTTTAGGGAACTGGTTatcttgttgttgttttttcacg
CAAAGTTCTTCTTTGGCTTATGTACGATATTCACTCGTTTCTCCTTTTCC
ATCCGCTTGAAGAATCCATCAAGTCACACTTCCTCCTATGCCTTTATACA
CGCCGTTGCAAAACATCATTCCAATCAAAGCATAACAAGCACATATTCCT
TCCAGGCCAACAAAAATATAGATAGAATTTCCTCAGTTTAAGTGTAAGAT
GTGTAACACAAATCAGTCGGTGCAAAGTCTTCTATAAACAAATCGAGTgc
cttttcatttttataaaacaATCATGTGATATTTCCGCAATTGATATGTA
GGTTGATATATAATACAGAAAAGTGGTAAGACATGGATTTATCAACAAAC
CATCATTCCGTGCAAAATTAGCTGGGTttaattcaaataatttttatcaa
taaagtTCTAATTGTACATGTGACTGACTGTTGAGCAGAATCCATCTTTG
TTCTGATTTCAAGCCGCGTACAAAGAGTTGCTTTCGACTCATACATACAT
AttaatctaaaataaaaaagatttatcttGCTAATTCGGAATAAAATTAG
AATTCGATGAAGTATTACCAGCAAATGCCGGATTTATTTATTCCTCAGCG
TTTTGAACGTGTCTTTTGTAGACATTTTTTGATGAAGAGTATTTTAACGC
TATTTTTCGAGTTCGGCTATGTTTTACACATGAGTGATATCGTTGTTATA
ATCATCCAATCGTTCAGTAAAGCTTGAATATACTTAAATCTTGGATAAAC
GGTGCAGAAAGACGCAAACACCATCTATTTATAGTGGTTTAGAGTTTTAA
AAGTGTAGTTTTCTGAAGCACTGTTTGAAGGTCGTCATGGTTGACATTTT
ATGAGGTTTTCCATAGTGTGGTTGACGTGGGAAAGCTACTTAGCGGAGTC
ATGTTACACTTTTTGACAGATTCCTCGGAACAGATCTCGTGAAACTGCAT
TGTTCTGACGACTCtgtggtgtttttttttaaagtctccTCTACCCTCAA
TTCTGGCACAAAAAAGTACATTTTATAAATAATAATGAATTTAACTataa
atttattgaataaattATAAGCAAATTATAACATACTTATATCCTGTCGA
CCAACATATTGGTTCATGTAAAAATGTTACAAGCCTCCTCCAAGCCATTA
AATCGTGGTTACTTTTTCCGacttctttttctctttcttcgtGAATTTTT
TATATCAAGACCCAGGGACTTTGTGAAGTGAAGCAATATCTCGTCGTTCT
TTCCACGTGCGGATTGCTTAACGCTATAAATAAATTGGGAATTACGAATC
AAATTGACCACTCTCGGAGTTTGTCAATTCCTTTAGATTCAGCTTTTTGG
TTTTGTGTGGTAGCTGTCATGTGCACAAAAATAAAAGGCGCGCGAAATAG
TTATCACTATAACTGTGATGGAACCTTAGCGCTCTTTTAAAGAAACAAGT
CCTCTAATGAGGTTAAATATACCTCTAGAATGCAAGATATGGTTAAATTG
CGGACTAAAAGTGAGTGAAACGTCTAATTTCATGCCTTTTTTACGTATAT
TTTTCATAAATAGCTAACtactaaaatcattaaaatcatatatttttata
aaaagtcgaatgaattaaaataatt Coding sequence (CDS) from alignment at scaffold_404:672474..677748 >TCONS_00063983 ID=TCONS_00063983|Name=TCONS_00063983|organism=Clytia hemisphaerica|type=CDS|length=2490bp|location=Sequence derived from alignment at scaffold_404:672474..677748 (Clytia hemisphaerica)
TCATCGTCTGTCATCAGTGATATGTAGCTGATGTTTTCCTCGAAAAAACT
GTCGATCTCGCTCTCTTGACTTGGTTGAATTTCTTTTTGTTGTTGTTGTG
GGTTTGGGTTTGGGTTTGGGTTTGCATTGGGGTGGTGGTGGTTGGATGCT
CATAAGGGCGTATATTGTACTCGTACCAGCCGACTGTTCCGTTGCGTGCC
GACTGACTCGCGACAAATATTTCATTGCTTTTGCATTCCGTTTGCTTACA
TATTCTAATACAAAAGGTGGTATGATAGTCGTTAAATTCTGATTTAACAT
AAGTAATAGACAACGATTTTGTACGGTTTGAAACTCCTGATCAAAAAGTT
CAGTTATTTGTTCCTTGTATTCGGCATTGGCAGTGTAAACACCAGGTCTT
CTCGGTATAAATTTCGACGATCCGTATTTAATTTGCGTCTCCAACATATC
GTTCCCTTCCATAAGTTGTTTCCACCGTTGGAACACGTCCTGATCGCCAA
ATCTAACTTCTTCAGACCTGTATACTTGCTTATTGAGGCAATCTTGGAGC
CAAAAGTCGGAAGGTCTACCACATGTTGTAGCAATTACACCCACGTCGTA
TTTCGGCCAAACAGACGTTAGCAATCTAGCCAAAAATGATTTTCCCGAAT
CACTAGCACCCAACAAAAATATTGTAGACTTTTTAGGTTTTTCCAAAGAC
AAAATAGAAAACATTTCGGAAATCATATCTTCTATAGTCATTCCATTTTG
AGACGCAACCGTGGTTAAAAAAGAAGTCCAAAATTTAGAAAATACTTTTC
CTTCTGTTTCGTCATAATCTTCTACTTTACTAATCATATCAGAATAGGGT
ACAAATTCGTCAGCAACATGCTGGTTAAACATTTGTTTTTTAATTGTTTC
TATTTGGTTTGATGGAACTAAGTTTTCCAATCGTTGTAATTCAGTGTCAG
TTGCAATAAGATAATCGTAATGTTTGCAATTCTTAATATTTTGTGTCCGG
AAATATTGCTTGTACGCCAGCGTGTGTGATACCCCTCTGGATCGCTTTAA
TGGTTGAGATGCCGCAAGGGGATTCCACTTGATAGCCCAACTTTGCGAGC
TTCTTGCTGAGGGCCGTTCCAGCGACGGGTCTGGAGAAGAGCTTTTCGTG
CTGCTCTTGTCCGTGCAATCTTCTGGCGGTGACATAGCGGATTGTTGCAA
AAATTTCCTCAGGGCGTTCCTTTTTCCAGTGAAGGATGCCGTCGTCGCAC
ACAGGACATCGTACATGGAATCCGTATAGAGACCTGAACGCGAGAATGCA
GCATCCTTGACAGTGTCTGTTTTTTTGAAATTTTTGACCATGTGTTGCCA
GTATATCTTTCGGGTGTGTCGTTCTCTTTGCTTGAGCTGGACGGAGTTCT
TAGCTGCGGCAGGCTGTAGGATGACCTCATGGGTGTGCCATGCTTTGTCC
TTACATCCCACAACAGTCTTTCCTCTTGAATCGTCTGAAAATGAATGATG
GTCACCTATTATAATTTTCTCATGTTTTACCCAGGCAGGATAATCGAACG
GACTTCCGTTATACTTTACACTGACAGCGACCATTGGATCTTTGTCGGGA
GCTGTAAATCCTATTGATTCCATATCTcgaaagaataagtttttattTTC
GATCAAATTCATTAAAACTCGAAGTGAACGAATGTCCAAATGTTTATCTG
CATTTGCTTGAAAACTTNTTAAAACTCGAAGTGAACGAATGTCCAAATGT
TTATCTGCATTTGCTTGAAAACTTGGCAAGGGTAAATCTCTACAGTTGCG
TAATGCCGCGGAAGTGACGTCGTTGCAATGTTCTAGCTTATGGCGTATAG
TTTCCACCAAATTAAACCACTTGTCTTGTGGAGGGGCATCGGTAACGAAA
TCAACGAAACGAGGAGGGACAGATAAAAGTGAATCCGGTACCTCAACGAA
TAGGTTGTCATCTTCTGGGAACAAATTGATAACATCGGGTTTGTTTACCA
ACTGTTTGTCTATATCGTCCAATGGTGTCTTAATCGGCTCAGGTTCATCG
TCCGAACTATCGGAAAAACATAAACGTCTTCGTTTTGGGACTACTCCTTC
TAACGAACCGGCAGTACAAGAACGGGTAGCAGAATGTGGATAGGTTTCTG
TTTCCTCTGCGTCAGTTACCTTCTCGGGTGCATTGAAAACGGGTACAGGA
CGAACTTGTTGAGGTGTAACTACGGGCGATTGCACAACGTCGGCAACTGT
CTCTTCAAAGATCTGTTGTGAAGGAGACATAAGCTCTAAATCAATTCTCA
ATTTCTTGTTGGGAATGTCACAAGTACCAACCACTTTACAATGTCTATCA
TGAATGTCACACGTCCCTTCGGGACCAAAAGCTCCAATAATAAACCATCT
AATAGAATGTGTAGGTAACAATCCCTCAATTAAAAACTCTAAACGTTGAA
TGATAGCTGGGTCGTTATAATCACCAGACTCCTTAGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063983-exon-scaffold_404-1491911889:672474..677748 | TCONS_00063983-exon-scaffold_404-1491911889:672474..677748 | Clytia hemisphaerica | exon |
| TCONS_00063983-exon-scaffold_404-1510915933:672474..677748 | TCONS_00063983-exon-scaffold_404-1510915933:672474..677748 | Clytia hemisphaerica | exon |
| TCONS_00063983-exon-scaffold_404-1575043694:672474..677748 | TCONS_00063983-exon-scaffold_404-1575043694:672474..677748 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:672474..677748 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001257 | Parvovirus_NS1_helicase |
| IPR027417 | P-loop_NTPase |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019079 | viral genome replication |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0019079 |
viral genome replication |
Blast
The following BLAST results are available for this feature:
|
