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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063955 ID=TCONS_00063955|Name=TCONS_00063955|organism=Clytia hemisphaerica|type=transcript|length=1569bp
TTTGTACCTAAAATGGACGAGGATTATAGTGTATTTGTCTTCAAGTATAA
TGGAGAAGAAAAATATGGAAGTGACTGGGCATGTTATTGGAAGGCAGAGG
GGAAAAAGAACGGCGATAGAGTCCAATATAAATTAGGCAAGAAGAAGGTT
TACGACGTTACATTAGTCCAATACTTCGAACGTAACGACGACGCTACAGG
TAATAACATTGATTTTATTTACGGTCTAGAAATTTAATTTGATGATATTA
TTGATCTACAAATTTAATCTTAGTAGCACCAACGTACGAGGTCTAATAAA
TTTTTGTGTACTACAGAGAAAATTACATAAATCTCATGTTGGTGAAGTGT
GGAAGGTTCCAGTTTTCAGGAAGAGGGTCGCAATATATTTTTTGTGAGAT
ATATCTATAAATcatcatattattttttcattggTTTTGAAATTGTGGAT
ATAACATGACATTTTCTTTTCGTGTTtacgaaatcaaaacaatacaTTCC
ATTCGAACgttcagaagacattgcaatggtgcatatcatgaatattcatA
TTCTGGAGAAATCGTTCGAATCTTTCAGGGCCTATTAACActgcaaattt
tttaaaagcttATTTTGAACTGTTTGGCTTTTTGATCTGATTAAGCCCCA
TTAAGCCTTTCACTGGCGCCTCCAAAATTACAGAGAAAACTTTCTGCGGC
GTGAAAGTGATTTTCTTACACTTTTTTCGACATTTGTATCCTCTGTAAAG
CGAAGATTTCTTCGATTTTCCCCTTAGAAGAGCTCATAGATCTTACAATG
TTGCCCCCTTAAAATTCCCaacctcaaaagatttcaaatatcTGAAAAAC
CCTCCTCTTTCTAGTATTCATAGAGGCGAagaattaaaaacaaacaaata
caaAACAACCCAAGAAAAAAGGTATATCATAAGATCTTCCATTTTAACCC
AAATTTCTTAAACTCTATCTAGTTCGGAAGGGAGTCTGAACTctgaaaaa
ttatcaaagtGCAAATCTGAATTTTGAACTAAAACGTCATGTTTAAAGTA
TACTACATAAGCAGATCAATGAGAAAAGGGACAGGGGGCTAAGGCCCTAA
AGAATGCACTTTCTTGTTGAGCTTTGTGGAAacgattttttaaatattcc
aGGAGACAAAAACCAAGAGAACCATGGAGCTGAGAACGAAACAAACGAAA
AAGAACATGAAGAGCGTCCACAAACAGaaaacgaaaattttcaaatcaaa
ataggTATAATTTCTTTTAACTACTTCTACAGTCGAACGTgttaaccgca
ctggctcaacttcagtatctttcttgtaggcccaattgtaaaaatgatga
aaaaactaaggttttagcctcgttttggggcTAAGATTGGTCACCACGCc
cctaaaaatataaattttgaaaaaaaaggaaaaatacacTCCCAAAGAAT
CAAGTGTGAAAAATGTCAGCCAAAtcgaaccatttttgaagtccccagcc
tgccccaaagtttttagcctcgttttggggctaaaactcgtgaccacgcc
cttaaaaaatcaaaatttt Run BLAST on NCBI transcript from alignment at scaffold_404:660673..662241- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063955 ID=TCONS_00063955|Name=TCONS_00063955|organism=Clytia hemisphaerica|type=transcript|length=1569bp|location=Sequence derived from alignment at scaffold_404:660673..662241- (Clytia hemisphaerica)
TTTGTACCTAAAATGGACGAGGATTATAGTGTATTTGTCTTCAAGTATAA
TGGAGAAGAAAAATATGGAAGTGACTGGGCATGTTATTGGAAGGCAGAGG
GGAAAAAGAACGGCGATAGAGTCCAATATAAATTAGGCAAGAAGAAGGTT
TACGACGTTACATTAGTCCAATACTTCGAACGTAACGACGACGCTACAGG
TAATAACATTGATTTTATTTACGGTCTAGAAATTTAATTTGATGATATTA
TTGATCTACAAATTTAATCTTAGTAGCACCAACGTACGAGGTCTAATAAA
TTTTTGTGTACTACAGAGAAAATTACATAAATCTCATGTTGGTGAAGTGT
GGAAGGTTCCAGTTTTCAGGAAGAGGGTCGCAATATATTTTTTGTGAGAT
ATATCTATAAATCATCATATTATTTTTTCATTGGTTTTGAAATTGTGGAT
ATAACATGACATTTTCTTTTCGTGTTTACGAAATCAAAACAATACATTCC
ATTCGAACGTTCAGAAGACATTGCAATGGTGCATATCATGAATATTCATA
TTCTGGAGAAATCGTTCGAATCTTTCAGGGCCTATTAACACTGCAAATTT
TTTAAAAGCTTATTTTGAACTGTTTGGCTTTTTGATCTGATTAAGCCCCA
TTAAGCCTTTCACTGGCGCCTCCAAAATTACAGAGAAAACTTTCTGCGGC
GTGAAAGTGATTTTCTTACACTTTTTTCGACATTTGTATCCTCTGTAAAG
CGAAGATTTCTTCGATTTTCCCCTTAGAAGAGCTCATAGATCTTACAATG
TTGCCCCCTTAAAATTCCCAACCTCAAAAGATTTCAAATATCTGAAAAAC
CCTCCTCTTTCTAGTATTCATAGAGGCGAAGAATTAAAAACAAACAAATA
CAAAACAACCCAAGAAAAAAGGTATATCATAAGATCTTCCATTTTAACCC
AAATTTCTTAAACTCTATCTAGTTCGGAAGGGAGTCTGAACTCTGAAAAA
TTATCAAAGTGCAAATCTGAATTTTGAACTAAAACGTCATGTTTAAAGTA
TACTACATAAGCAGATCAATGAGAAAAGGGACAGGGGGCTAAGGCCCTAA
AGAATGCACTTTCTTGTTGAGCTTTGTGGAAACGATTTTTTAAATATTCC
AGGAGACAAAAACCAAGAGAACCATGGAGCTGAGAACGAAACAAACGAAA
AAGAACATGAAGAGCGTCCACAAACAGAAAACGAAAATTTTCAAATCAAA
ATAGGTATAATTTCTTTTAACTACTTCTACAGTCGAACGTGTTAACCGCA
CTGGCTCAACTTCAGTATCTTTCTTGTAGGCCCAATTGTAAAAATGATGA
AAAAACTAAGGTTTTAGCCTCGTTTTGGGGCTAAGATTGGTCACCACGCC
CCTAAAAATATAAATTTTGAAAAAAAAGGAAAAATACACTCCCAAAGAAT
CAAGTGTGAAAAATGTCAGCCAAATCGAACCATTTTTGAAGTCCCCAGCC
TGCCCCAAAGTTTTTAGCCTCGTTTTGGGGCTAAAACTCGTGACCACGCC
CTTAAAAAATCAAAATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063955-exon-scaffold_404-1575043694:660673..662241 | TCONS_00063955-exon-scaffold_404-1575043694:660673..662241 | Clytia hemisphaerica | exon |
| TCONS_00063955-exon-scaffold_404-1510915933:660673..662241 | TCONS_00063955-exon-scaffold_404-1510915933:660673..662241 | Clytia hemisphaerica | exon |
| TCONS_00063955-exon-scaffold_404-1491911889:660673..662241 | TCONS_00063955-exon-scaffold_404-1491911889:660673..662241 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:660673..662241 - |
Blast
The following BLAST results are available for this feature:
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