TCONS_00063942 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063942
Unique NameTCONS_00063942
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2393

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063942 ID=TCONS_00063942|Name=TCONS_00063942|organism=Clytia hemisphaerica|type=transcript|length=2393bp
aaaatatattttcatattttacccCCGACGCGCTAATGTTTACGTCGACA
TATGACGTAGTTTCAAAACACTTCCCATAATGCTAAGTACACGTTCACAG
AAGCAATCAAAATTGCGGAGGCTCTTGTTCAAAACATAACATCAGAAGAC
GTTGTGAAGTAAAGAAAGAATCAAGAAGAAGATTCTTTGACCGAATTTTG
GATTTCTCCTTTGGGAtactgatttgattttgtttggcTTGGAACTAATT
TAACATGGGCTtcaaatttctTGAAGTTCTAAAACCATTCATATCGGTTT
TACCCGAAGTTTCAAAGCCAGAAAGAAAGATTCAATTCAGAGAGAAGGTA
TTATGGACAGCCATCACTCTCTTTATCTTCTTGGTTTGTTGCCAGATTCC
CTTGTTTGGAATTATGTCTTCAGATTCTGCTGATCCTTTCTACTGGCTCC
GTGTTATTATGGCATCCAATAGAGGAACTTTGATGGAACTTGGTATTTCA
CCCATTGTTACATCGGGCTTGATCATGCAACTTTTGGCTGGTGCCAAAAT
TCTTGAAGTTGGTGACACTCCACGTGACCGTGCTTTATTCAATGGTGCCC
AAAAATTGTTTGGAATGATCATTACAATCGGTCAAGCTATTGTTTACGTT
ATGACTGGAATGTATGGTGAACCATCTGATCTTGGAGCTGGTGTTTGTCT
TTTGATTATCATTCAATTATTCTGTGCTGGTCTCATTGTCTTGCTTCTTG
ATGAATTATTGCAAAAAGGATATGGTTTAGGATCTGGTATTTCTCTCTTC
ATTGCTACCAACATTTGTGAAACAATTGTCTGGAAAGCATTCAGTCCAGC
CACTGTCAACACCGGAAGAGGTACTGAATTTGAAGGAGCTGTCATTGCTT
TGTTCCATCTTCTTGCAACCAGAACTGACAAAGTCAGAGGTCTTCGTGAA
GCTTTCTACAGACAAAACCTTCCAAACTTGATGAACTTACTTGCCACAAT
CTTTGTCTTTGCTATTGTTATATACTTCCAGGGATTCCGTGTAGATTTAC
CAATCAAATCAGCAAGATACAGAGGACAATATAGTTCATATCCAATTAAA
CTGTTTTACACATCAAACATTCCAATCATTTTACAGAGTGCATTGGTATC
AAACGTATACATCATCTCACAAATGTTATCATCCAAATTCGCTGGTAACT
TCTTTGTAAGCCTTCTTGGTGTATGGAATGAGGCTGGTGGCGCGTCCAGA
TCATACCCAATTGGTGGATTATGTTACTACTTGTCTCCACCAGAATCATT
GGGAAATATCGTGGAAGATCCAATCCACGCTTTCATGTACATCTTTTTCA
TGCTTGGATCATGTGCTTTCTTCTCCAAGACATGGATTGATGTCTCTGGC
TCATCTGCCAAAGATGTTGCCAAGCAATTGAAAGACCAACAAATGGTCAT
GAGAGGTCACCGTGAAAAATCTATGATTCACGAGTTGAACAGatACATTC
CAACAGCTGCTGCTTTTGGTGGTCTTTGCATTGGAGCTTTATCTGTTTTG
GCCGACTTTATGGGAGCCATTGGATCTGGTACTGGTATCCTTCTTGCCGT
CACAATTATTTATCAATACTTTGAAATCTTCGTGAAAGAACAGAGCGAAC
AAGGTGGTATGGGTACATTGCTTTTCTAAACCTAACCGTAGAAATTTGAT
GGTACCGTCATCACTTATAGCAATTATTTCAACTAAAGCACGTTATTTAg
aaacatttttggaaattttaaatattattgaaaaaacttatttttgtgTA
CTTTGAAACGAATGGAATTACCGTACCTACACGACGAATACATCATCCCT
TGTGAATATTGATAAATTTGGATTGTGTAATTTACATAATTTTCTAACTT
AGTTTATTATTTTTGCCTGTTCTATCcaagttcattttttaaaaatggaa
GATTTGTCTCTTTAGAAAGAATTGATATCGTTGACCGACTTTTTACtttg
acatttttaggctttttgcttttttgatattttccacCACCAGTCAGTGT
TTCGAAAAACtagatttttaaagatttttttacagttttaggggacaaat
ttcttttatttgaatttaaagGTGCCCACTTGTAAAATAATTTGTCATTC
TGTGTTGTTCTGAAAATGACATTTAATTTATCATTTATGGAAGAAGAAAA
ACCAAATGAAACTTTTTCTGCATTTTCAGGTTATCCTATCTTAAGCCCAC
CCTTCCCCTCCTAATGAAATTCAACTAAACAAGCCATCccattggctaaa
agcaaaaacataaacaaaaaaatgtccagAGTAAGAGCACAGAAAGCACA
TTTTTCTCATACTCTgtaggtcctttaaattaacccaagTCCG
Run BLAST on NCBI

transcript from alignment at scaffold_404:554250..560418-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063942 ID=TCONS_00063942|Name=TCONS_00063942|organism=Clytia hemisphaerica|type=transcript|length=6169bp|location=Sequence derived from alignment at scaffold_404:554250..560418- (Clytia hemisphaerica)
AAAATATATTTTCATATTTTACCCCCGACGCGCTAATGTTTACGTCGACA
TATGACGTAGTTTCAAAACACTTCCCATAATGCTAAGTACACGTTCACAG
AAGCAATCAAAATTGCGGAGGCTCTTGTTCAAAACATAACATCAGAAGAC
GTTGTGAAGTAAAGAAAGAATCAAGAAGAAGATTCTTTGACCGAATTTTG
GATTTCTCCTTTGGGATACTGATTTGATTTTGTTTGGCTTGGAACTAATT
TAACATGGGCTGTAAGTTTTCACATTTATATTGTCTGACTATCCTTCAAA
AGGGTACATGAATCACTGATTATTTTTGAATGAAAATATTGTATTTTTTT
TGTGATAAATATTTTTTGTAATGTTGACATAGAAAGCTAACTTTATATCA
TTTTTATTTTTAGTCAAATTTCTTGAAGTTCTAAAACCATTCATATCGGT
TTTACCCGAAGTTTCAAAGCCAGAAAGAAAGGTTTGTTAATTTTTATCAT
TATGTTTATATTACCTTTCCCTTATAAAAATCCAGTCAGTAAAAAGGGTA
ATACGCGTGCCAGATAATTTTTGGCGTAGCCTTGAATCAGGTCTTTGAGA
TTGCCAACTGTTGTGTATAAATTTGTAGGGAAGGTAAACAAACGTATGTC
TTTGTCTGTGAGTGAGGGATTAGGCGTAAATCAATAATATGTTCCGTTTG
CGTCATAAAACATTCACGTCAGTGAATTTCAAGTTGATAATTTCAATGAG
GGTGGACGGAAAAAAACTCAAATGGGGCTCAATGTGGGTAAAGTAAATAA
AAACTTTGAATGAAGCGAATGGTGATGTAGAAAAGGCCCAAGGGCTTAGC
TATTGAAAAAATTTTCCAACATTATTGCGACTGGGCGGACTTGGGATTTA
TGTTTTGAAGGTAAGTTGGGCGACGCGAACAGAACATATTATTGATGGTC
GCCTTAGGGAAAGTTAGGTTTTCAACTGATAAACTTTTAAAGTTGATCTT
TGTTTGAGAAAAAATTTCAGGAAATGATAATTTGAGATCTGCTATCAGGT
TATTGCTAAGCTTTTCCAATGTCAAAAGACTTTCAATGTCATTTTCAAAT
CTCAAAGTGGATAAAAAAAGTTAAAGCTCGACGTTGCAGATAAATAGACT
GAGGTTGTTTTCAAAGAAGTCTACTTTTTGTTGGTAACTTGTATGTGGAC
AATTTCATTTATATACAATTGCTTTTCAGAATAGGATGTAAGCAAGTTTT
TATCTCCAAATTACCTGAAAATGAAAAAGCTGGTTATCTCTTTAAGTTCT
AAAGGGACAAAATTTTCTTGAAAGCAACTTTTTAACAAATACTGTAAGTT
GGTCTAATGTCGACATCCCTCTTCTTATTTTGTCACCTTTTTTTAGCGAT
AGGAATAATAGGAAGGTCGGAATCACTGATTGAAATAATTTTCTTTGCTT
AGCAATCAGTCAACCTTCCTATTACTCCCATCTCTAAAGAGGGATGTCGA
AATTAGAAGAGGGATGTTGACATTAAACCAACTTACGGTAATTTTGCTGG
ATAATTTAGGTTAACATCAAATTTTGCAAGTTTTTACCATTCTATCAAAT
TTACCCAAATTGTACCTAAGAAAGCTCACATTACCTTAATTCCTGTGAAT
TTTGTGTTCCTTTTCTTATTTTGCACCCTCAATACACCCTTCACAATTTT
GTAACTTTTGCTACCTTGCACCATTTGAGGGTCAAGCATAAAGGTTGTTT
ATTGGAAATTTGGTTGCATGATTTTAAAGCTCTAAAACCATTACGTTTTT
CTTTTGCTTTAACAGATTCAATTCAGAGAGAAGGTATTATGGACAGCCAT
CACTCTCTTTATCTTCTTGGTTTGTTGCCAGGTATATTTTTAGCTTACTT
AATTTTTATTTAAACTGTTTTGTCATCCAACTTAAAAACATTGAATTTTA
GTCCAACTGAAGGTTACGTTGCACTAGGAATTCACTTCCTTGTGGGATAA
TTGCTAATTGATGATGTGTTATACATTTTAATTATACATAACTAATTATT
CAACCAATTTGATAACTGTGTTTTTAATGAGCCAATGGTTATTTGGGGCA
ATGAATTAATGAAAGTTTATTTCTTCTAGATTCCCTTGTTTGGAATTATG
TCTTCAGATTCTGCTGATCCTTTCTACTGGCTCCGTGTTATTATGGCATC
CAATAGAGGAACTTTGATGGAACTTGGTATTTCACCCATTGTTACATCGG
GCTTGATCATGCAACTTTTGGCTGGTGCCAAAATTCTTGAAGTTGGTGAC
ACTCCACGTGACCGTGCTTTATTCAATGGTGCCCAAAAATTGTTTGGAAT
GATCATTACAATCGGTCAAGCTATTGTTTACGTTATGACTGGAATGTATG
GTGAACCATCTGATCTTGGAGCTGGTGTTTGTCTTTTGATTATCATTCAA
TTATTCTGTGCTGGTCTCATTGTCTTGCTTCTTGATGAATTATTGCAAAA
AGGATATGGTTTAGGATCTGGTATTTCTCTCTTCATTGCTACCAACATTT
GTGAAACAATTGTCTGGAAAGCATTCAGTCCAGCCACTGTCAACACCGGA
AGAGGTAATTTTGATATTTGAAACTCATATTATTTGTATTTTAACTTTTG
AGAAATTGATTGGTATAAAAGCTAGCTGACAAACCATCTGTTTTAATTGG
TCCAACCCTAATTCTCAAAAGCTAAGTCAGCATCTGCTAGAGACCACAAG
GGGACTTTTTAGCTTATTCTTCACAAAATTTACTACTATGTTAAAATGCA
CTACATGTTTTGGTCTTTGTAGGTACTGAATTTGAAGGAGCTGTCATTGC
TTTGTTCCATCTTCTTGCAACCAGAACTGACAAAGTCAGAGGTCTTCGTG
AAGCTTTCTACAGACAAAACCTTCCAAACTTGATGAACTTACTTGCCACA
ATCTTTGTCTTTGCTATTGTTATATACTTCCAGGTAAGGAAATCAAACAT
TCAGAAAGAAATGTAGTAGATAATTGTAAATATAAAATTACACTTCTAGT
AAACCAAGAAGCTGGTGGAGATTTCGCTGATATCTTTGTTCTTTACTGAA
CTTGGTTTTGTAAATCTTTAGGTTTGAAGATTTTTCACGTCAATTTACCT
TAACTTTTTAGGGATTCCGTGTAGATTTACCAATCAAATCAGCAAGATAC
AGAGGACAATATAGTTCATATCCAATTAAACTGTTTTACACATCAAACAT
TCCAATCATTTTACAGGTAAGACAGTCTTAAGTGCTTAATTGTCTATTGT
AGCCTACATGTAGTAATATCGTTGTTTTTTATTTCAAATTCTGATGTCAC
ATGTCTTTTAACCAATGAAAATTATCTTAGAAAAAATTTACTTTATTTTT
GACTTTTATTATATTTTTTGTGACATTCATCTGTAATTTTTTTCTTTTCA
TTTAAAGAGTGCATTGGTATCAAACGTATACATCATCTCACAAATGTTAT
CATCCAAATTTGCTGGTAACTTCTTTGTAAGCCTTCTTGGTGTATGGAAT
GAGGCTGGTGGCGCGTCCAGATCATACCCAATTGGTGGATTATGTTACTA
CTTGTCTCCACCAGAATCATTGGGAAATATCGTGGAAGATCCAATCCACG
CTTTCATGTACATCTTTTTCATGCTTGGATCATGTGCTTTCTTCTCCAAG
ACATGGATTGATGTCTCTGGCTCATCTGCCAAAGATGTTGCTAAGCAATT
GAAAGACCAACAAATGGTCATGAGAGGTCACCGTGAAAAATCTATGATTC
ACGAGTTGAACAGGTTAGCTTTTTACATTTAAAACCCATACTAGTACAGG
CAATAGCATGATATTAAATGAAGCTCTTTAGAAAACTACATTTCTATGCA
AGTTTGTTTAATGCTCTTCTTTATAAAATCGAAGTTTCAAAAACTCCTTA
TATCTCACCTATTTCTTTCCTCTCAACACTATTTACTATTTTGTTTTGTT
TTTTAGATACATTCCAACAGCTGCTGCTTTTGGTGGTCTTTGCATTGGAG
CTTTATCTGTTTTGGCCGACTTTATGGGAGCCATTGGATCTGGTACTGGT
ATCCTTCTTGCTGTCACAATTATTTATCAATACTTTGAAATCTTCGTGAA
AGAACAGAGCGAACAAGGTGGTATGGGTACATTGCTTTTCTAAACCTAAC
CGTAGAAATTTGATGGTACCGTCATCACTTATAGCAATTATTTCAACTAA
AGCACGTTATTTAGAAACATTTTTGGAAATTTTAAATATTATTGAAAAAA
CTTATTTTTGTGTACTTTGAAACGAATGGAATTACCGTACCTACACGACG
AATACATCATCCCTTGTGAATATTGATAAATTTGGATTGTGTAATTTACA
TAATTTTCTAACTTAGTTTATTATTTTTGCCTGTTCTATCCAAGTTCATT
TTTTAAAAATGGAAGATTTGTCNTAGTTCATATCCAATTAAACTGTTTTA
CACATCAAACATTCCAATCATTTTACAGGTAAGACAGTCTTAAGTGCTTA
ATTGTCTATTGTAGCCTACATGTAGTAATATCGTTGTTTTTTATTTCAAA
TTCTGATGTCACATGTCTTTTAACCAATGAAAATTATCTTAGAAAAAATT
TACTTTATTTTTGACTTTTATTATATTTTTTGTGACATTCATCTGTAATT
TTTTTCTTTTCATTTAAAGAGTGCATTGGTATCAAACGTATACATCATCT
CACAAATGTTATCATCCAAATTCGCTGGTAACTTCTTTGTAAGCCTTCTT
GGTGTATGGAATGAGGCTGGTGGCGCGTCCAGATCATACCCAATTGGTGG
ATTATGTTACTACTTGTCTCCACCAGAATCATTGGGAAATATCGTGGAAG
ATCCAATCCACGCTTTCATGTACATCTTTTTCATGCTTGGATCATGTGCT
TTCTTCTCCAAGACATGGATTGATGTCTCTGGCTCATCTGCCAAAGATGT
TGCCAAGCAATTGAAAGACCAACAAATGGTCATGAGAGGTCACCGTGAAA
AATCTATGATTCACGAGTTGAACAGGTTAGCTTTTTACATTTAAAACCCA
TACTAGTACAGGCAATAGCATGATATTAAATGAAGCTCTTTAGAAAACTA
CATTTCTATGCAAGTTTGTTTAATGCTCTTCTTTATAAAATCGAAGTTTC
AAAAACTCCTTATATCTCACCTATTTCTTTCCTCTCAACACTATTTACTA
TTTTGTTTTGTTTTTTAGATACATTCCAACAGCTGCTGCTTTTGGTGGTC
TTTGCATTGGAGCTTTATCTGTTTTGGCCGACTTTATGGGAGCCATTGGA
TCTGGTACTGGTATCCTTCTTGCCGTCACAATTATTTATCAATACTTTGA
AATCTTCGTGAAAGAACAGAGCGAACAAGGTGGTATGGGTACATTGCTTT
TCTAAACCTAACCGTAGAAATTTGATGGTACCGTCATCACTTATAGCAAT
TATTTCAACTAAAGCACGTTATTTAGAAACATTTTTGGAAATTTTAAATA
TTATTGAAAAAACTTATTTTTGTGTACTTTGAAACGAATGGAATTACCGT
ACCTACACGACGAATACATCATCCCTTGTGAATATTGATAAATTTGGATT
GTGTAATTTACATAATTTTCTAACTTAGTTTATTATTTTTGCCTGTTCTA
TCCAAGTTCATTTTTTAAAAATGGAAGATTTGTCTCTTTAGAAAGAATTG
ATATCGTTGACCGACTTTTTACTTTGACATTTTTAGGCTTTTTGCTTTTT
TGATATTTTCCACCACCAGTCAGTGTTTCGAAAAACTAGATTTTTAAAGA
TTTTTTTACAGTTTTAGGGGACAAATTTCTTTTATTTGAATTTAAAGGTG
CCCACTTGTAAAATAATTTGTCATTCTGTGTTGTTCTGAAAATGACATTT
AATTTATCATTTATGGAAGAAGAAAAACCAAATGAAACTTTTTCTGCATT
TTCAGGTTATCCTATCTTAAGCCCACCCTTCCCCTCCTAATGAAATTCAA
CTAAACAAGCCATCCCATTGGCTAAAAGCAAAAACATAAACAAAAAAATG
TCCAGAGTAAGAGCACAGAAAGCACATTTTTCTCATACTCTGTAGGTCCT
TTAAATTAACCCAAGTCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040077XLOC_040077Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063942-exon-scaffold_404-1575043694:560158..560418TCONS_00063942-exon-scaffold_404-1575043694:560158..560418Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:559938..560005TCONS_00063942-exon-scaffold_404-1575043694:559938..560005Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:558538..558603TCONS_00063942-exon-scaffold_404-1575043694:558538..558603Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:557815..558289TCONS_00063942-exon-scaffold_404-1575043694:557815..558289Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:557436..557596TCONS_00063942-exon-scaffold_404-1575043694:557436..557596Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:557171..557257TCONS_00063942-exon-scaffold_404-1575043694:557171..557257Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:555891..555908TCONS_00063942-exon-scaffold_404-1575043694:555891..555908Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:555344..555699TCONS_00063942-exon-scaffold_404-1575043694:555344..555699Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1575043694:554250..555150TCONS_00063942-exon-scaffold_404-1575043694:554250..555150Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:560158..560418TCONS_00063942-exon-scaffold_404-1510915933:560158..560418Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:559938..560005TCONS_00063942-exon-scaffold_404-1510915933:559938..560005Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:558538..558603TCONS_00063942-exon-scaffold_404-1510915933:558538..558603Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:557815..558289TCONS_00063942-exon-scaffold_404-1510915933:557815..558289Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:557436..557596TCONS_00063942-exon-scaffold_404-1510915933:557436..557596Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:557171..557257TCONS_00063942-exon-scaffold_404-1510915933:557171..557257Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:555891..555908TCONS_00063942-exon-scaffold_404-1510915933:555891..555908Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:555344..555699TCONS_00063942-exon-scaffold_404-1510915933:555344..555699Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1510915933:554250..555150TCONS_00063942-exon-scaffold_404-1510915933:554250..555150Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:560158..560418TCONS_00063942-exon-scaffold_404-1491911889:560158..560418Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:559938..560005TCONS_00063942-exon-scaffold_404-1491911889:559938..560005Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:558538..558603TCONS_00063942-exon-scaffold_404-1491911889:558538..558603Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:557815..558289TCONS_00063942-exon-scaffold_404-1491911889:557815..558289Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:557436..557596TCONS_00063942-exon-scaffold_404-1491911889:557436..557596Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:557171..557257TCONS_00063942-exon-scaffold_404-1491911889:557171..557257Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:555891..555908TCONS_00063942-exon-scaffold_404-1491911889:555891..555908Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:555344..555699TCONS_00063942-exon-scaffold_404-1491911889:555344..555699Clytia hemisphaericaexon
TCONS_00063942-exon-scaffold_404-1491911889:554250..555150TCONS_00063942-exon-scaffold_404-1491911889:554250..555150Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_404supercontigscaffold_404:554250..560418 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
306.598	290.17	164.017	135.042	177.195	127.122	431.896	424.978	420.516	383.076	253.858	340.508	349.225	320.39	309.148	326.791	263.911	293.792	133.325	224.516	261.226	217.672	256.095	313.672	130.766	112.611	230.283	232.164	435.816	307.382
Blast
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BLAST of TCONS_00063942 vs. Swiss-Prot (Human)
Match: S61A2 (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3)

HSP 1 Score: 854.358 bits (2206), Expect = 0.000e+0
Identity = 420/476 (88.24%), Postives = 453/476 (95.17%), Query Frame = 3 
Query:  255 MGFKFLEVLKPFISVLPEVSKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWLRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKILEVGDTPRDRALFNGAQKLFGMIITIGQAIVYVMTGMYGEPSDLGAGVCLLIIIQLFCAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPATVNTGRGTEFEGAVIALFHLLATRTDKVRGLREAFYRQNLPNLMNLLATIFVFAIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNVYIISQMLSSKFAGNFFVSLLGVWNE--AGGASRSYPIGGLCYYLSPPESLGNIVEDPIHAFMYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLKDQQMVMRGHREKSMIHELNRYIPTAAAFGGLCIGALSVLADFMGAIGSGTGILLAVTIIYQYFEIFVKEQSEQGGMGTLLF 1676
            MG KFLEV+KPF +VLPE+ KPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYW+RVI+ASNRGTLMELGISPIVTSGLIMQLLAGAKI+EVGDTP+DRALFNGAQKLFGMIITIGQAIVYVMTGMYG+P+++GAG+CLLIIIQLF AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSP T+NTGRGTEFEGAVIALFHLLATRTDKVR LREAFYRQNLPNLMNL+AT+FVFA+VIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN+Y+ISQMLS +F+GNF V+LLG W +   GG +RSYP+GGLCYYLSPPES+G I EDP+H  +YI FMLGSCAFFSKTWI+VSGSSAKDVAKQLK+QQMVMRGHR+ SM+HELNRYIPTAAAFGGLCIGALSVLADF+GAIGSGTGILLAVTIIYQYFEIFVKEQ+E GGMG L F
Sbjct:    1 MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRDTSMVHELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQAEVGGMGALFF 476
The following BLAST results are available for this feature:
BLAST of TCONS_00063942 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S61A20.000e+088.24Protein transport protein Sec61 subunit alpha isof... [more]
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