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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063890 ID=TCONS_00063890|Name=TCONS_00063890|organism=Clytia hemisphaerica|type=transcript|length=2516bp
CTGAGAGATAAAGATGGAGTCGatcaaaacaaccaaaacaagCAAACTGC
ATAACTTTTTTGTGACAGATATTTTGAGCCACACAGTTACCAGCAATTTC
AAGCTCAAGTTTCACATGTTATGTGGATTCCTGAAGAAGAACTCACCAAT
CAATATGCAGAACTGATCAAAGCTTACTTCTCAAAGGTACCTTCAGAAGA
GACTATTCAATCAAGTCCTCAAGAAACAACAGAAATTGAGGAGCTggaga
aaaaaacgaaaagcCTTAAGATACAGAGAAAGGAAAGTGTAGTTGTCGAA
AGCGAAGTCAAAGAAATAGTGACCAATGACAAAGGAAAGCAAACTGATGC
GAACATTCTTCCAACTGAAAATGTATCTCCAACAATGTCCAATTCACCAA
TTACAACAGCACCAATGGGTAAGAAACGCAAACGTAAACAAATTGATCCT
GACAAAGTGTTATGGCGAAGTAAAAGACTGAAGGAGAATGATGAAAAATT
GGCTGCCTCTTCTTTCAATTGTACCGTCTGTCAAAAATCATTTCGACGTG
AAGATATCTATCTTGCACACATGCTCGATCACGACCAAATTGGTGAGCAA
TCAATCCTTGTCAAAAAGAGGAAATATACTAGACGAGAGAAGAATCTATC
TGATGATTTGTTTACCGTTTCCGAAGAAAACAATATTCAGAAATATCAGT
GTCGTTTATGTGCTCATGTGTTTTTACAGCTTGACGAAGCTCTCGCGCAT
CAGAAACAACATGCTAAATCGTCCAATCAAATGTACTGTGGTATGTGTGA
CAAACATTTCGTTAGAAAAGATGCATTCGCGAATCACGTGGAAAGCCATA
AAGGAGTCACTTCATTCGAATGTGATAGATGTGGCAAGTGTTTTGCAAGC
CTCGATGCAATCTCCAAACATAAATTGAACTCTTGTAAACAATCACTCCT
TACATTTCACAAATGCACCATCTGTGAACAGGATTTCGACAGCCAAACAG
CATTAGATGCACACGAGCCGTGCAATATTGAAGGACAAGTTGAATTTTGT
TGTGAACCGTGTGGTGAGTCATTCTCAGTGAAAGCCGTTTTCGAAGAACA
TTTGAGATCTCATGAAATGCAGATTATTGATCCACACACGTGTGCGACAT
GTGGTTTGAAATTAACGTCGAAGACAGAGTATGAGGAGCACGTCAAGACT
CATGATTATGATATCTATCGATGTCATTGTTGTCATGAAGTTTATAACTT
GTTGGAAGATCTTGAAATGCATTATCAAATGTCTGAGACATGTATAGAAG
TTACGTGTACCGATTGTAAAGTAAATTTCCAGAGTAGTAATGAGTTGAGA
ACGCATTTGAAAGAACAAACACTAGCTGCTGCTACATTGGCAGGGGAAGA
AATCGACATAGAAGAGACTGAAGTTTTTATTTGTCGTTTTTGTCAACGTG
GCTTTCATACTAATGATCCGTACGTTGCTCACTTGAAAATCCATTCTTCA
GACAAGTTGAAAGCATGTGATACGTGTAATGAGACTTTTGAAACGGAGGA
GAAGCTAGGTATCCATTACCGTTTGGTACATCATCGGAATACCAAATTCC
CTTGCATCGAATGCGGCCttatttttagtgaaaaagcacAGCTAAAGAAA
CATTGTAAAGAAAGTCATGCTAACgataacattttcaaatgtttACCGTG
CGGACGTACCTTTTACCAGAAAATCGAATTCAATCGACATATTGTGACTA
AGCAACATAATAAACGTGTAGTGGAAGCTGGCTTGGCGGATAGCACACAG
TCACAACTTGAAGGGATTAGATGCCCAATATGTGAGAGAGTATGCGCTAA
TAATCGTGAATTGAAACGTCATCAATATGATCATCAGAGAATCCAATCCA
AACCACAGCCTGAGAAATTGTTAAACCGTGATCAACAAGTTGTTGTACCG
ACCAGTGAATCAGTACCAATTATATTGAacgatttttataattttgtagA
CGGGGAACATGTTGTTCTCACAACAGATGATGCTCAACAAGCGGGAGCGC
CAGATTTACTAAACGCTAGGCTAGATATTGATTCTGAAGGGAATATTGGT
ATTATTTATGTTGACAAAGAGGAAGGTGAGGCTTCTGTAGAAACAGTGCC
AACTGCTGATGCGGACGTTGAACACATGCTAGTTATTAAAGACGATCAAG
AACAGGCTGAAATCTCTACTGCTAGTGGACATGTAAACGAAGAAGCTTTC
TTAGCACTCACGGAAATGGTAAAACAGGGTAAAATTGATTTGTCAAGTTT
CCAAGTGATTCAAGAAAACCCGAAAGAACCGTAATTTATTAAGTTTgact
ttttgtgtttttttttgtgagatttttgcttatttttggcaattctttta
tttaattcttctaatatttttctttacatttGTTTTCAATCATAGTTGTC
CACTTCAAAACGCTCTTCAAACTTATTTTTGATTTCAGTTTTTCAATCCT
TCCAGGccgtgtgttt Run BLAST on NCBI transcript from alignment at scaffold_404:533075..546813+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063890 ID=TCONS_00063890|Name=TCONS_00063890|organism=Clytia hemisphaerica|type=transcript|length=13739bp|location=Sequence derived from alignment at scaffold_404:533075..546813+ (Clytia hemisphaerica)
CTGAGAGATAAAGATGGAGTCGatcaaaacaaccaaaacaagCAAACTGC
ATAACTTTTTTGTGACAGATATTTTGAGCCACACAGTTACCAGCGTAAGT
ATTTACATTTCTTAGTATACGAGCTATAACTTGCACCAAGAGTTTAATCA
ATATTGTAGTAGAGGCTAGCTTTAGCtatgttgttaaaaagaaactatct
ttCATATCAGCGGATACTATCTcacttaaaaagaaactaagtTCGTTTCA
GGAGAAACTATCTcacttaaaaagaaactatctcatttaaaaagaaacta
tctcgtttaaaaagaaactatctcgtttaaaaagaaactatcatttCTAA
ACGAGTTCATCGGAAACTTTTTCCCAGAAAAGACGAGTTACAGTAAACGA
GTTATAAATACTGTTTTATCAAAAAGCGGAGTAAGGAAGAGTTGTAACTC
GAGCTTAGAAGAAAGAAGCGTGCTTTTTTAAGAACTAGCCAAAGAGGCCA
TTTTCTCAAAGTGTCTGTTCCTCCTTTTCAACAAAcaaccttttttcaaa
atagggcGGGGCCCTTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggggggggggggcgggg
gggggggggggggtgctgCCCGACTTttgaactttggacccttaccggga
ctaaaaaggataaaagaaaggaaaattttgggaattttacgacccttagc
gggacaaatttgactaattttgaccaaatttcgatctttcattcaggggg
taaaaagtcgaaattttttcttttttccgacccttagtgggactgaaagt
tgattttctgatttttccgacccttagcgggactttggaagtccaaaaaa
ggcacccttgagggcggcacataccgtacccccGGGGGTTCgagcacata
cccagcacccattttgcctatgTACCCCTGCCCCACCTGTAAAATACGGA
CCAGACAGTAAAACGCGACCCGTGAGTGAATGACTTATCAAAATTTGGAC
TTTTTGGCTACTTCAGAGAAAAGCACGCCTTTTTTACAAGCCCAAGTTGC
AACTCTTCCTTACTCAGCTTTTTTATAAAACCGTATTTATAACTCGTTTA
CTGTAACTCGCCTTTTCAGGACGTAAGTTTCCGACGAACTGAGATATTTC
GGTTAAATAAatatgatagtttctttttaaatgagatagtttcgttttaa
atgggATAGTTTCTCCTGAAATGAacttagtttctttttaagggAAATAG
TATCCCCTGAATGAaacatagtttcgttttaaatgagatagtttcgtttt
aaatgagatagtttcgttttaaatgagatagtttcgttttaaatgagaaa
gtttcgttttaaatgagatagtttcgttttaaatgaaATAGTTTCTCCTG
AAATGAgcttagtttctttttaagggAAATAGTATCCCCTGAATGAaaaa
tagtttctttttaaacgagatagtaTCGGTTTAAATGaaatagtttcgtt
ttaaacaagatagtatttattggcgCTTCTGCGCGCCATACGATTGAGTT
CGACGagcttcgattaacgttcgatcaacttagtttaacgttcgatcaac
ttcgattaacgttcgatcaacttcgattttactttaaaaagtttaaattt
tgcggggctaaatttggaagattttttgtAACACCACCTGAAGctgaatt
tttctaaaacttgTTCTGCTCAAACGTATGAGTCAGTTTTCTATGGGTAT
GGTAAGACAAATTTTCTcattaacttttttcaaattttttgatttgtatg
TGACGTCATTTGACGTTCGAACtgccttttgattggtcttttttttctca
aaatggcagaaaatataaacaaacaacTGAATCTcagctttcagaaattt
tttatgcaaaaaaaattacagaTTTTTGGGATGTTAGCTCCAACAAAGTA
ACATAAAATGATTTGTCTcagcttatttatttttgggATAAATCTGCTCT
AAATTCCCAATCTCTTGCTACTGCCTTGACCCTTATTGTGTCCTCCCGAG
ACAAACGTTTCTTCTACCAAAATAGGAAAGCCCTCaaattttcataggaa
aatgaaaactttcatttcaaagaagTAAACCTTTTCCAAACTTAATCAAC
CTGTAGAAATTTTGTATCAGGACTTGTcagtttcaaattttgttgGACCT
CTCTGCAAGgaaatttttctagaaaagaaaaTCTCAATGAATCTgctttg
caaattattttttcaagaaagtgGGAAAAACTTGTTGTTAACTAatacca
gacgatctcaatcgaacagaatcgacgatcgaaccagtcgaaccaaatcg
aacgcaatcgacctattgaaattcgattgtcgaacgcaatcgaatctcaa
tcgaatattaccgcaattttccgattcgattgatattcgattgcgttcga
ttgatgttcgattgcattcgattgcgttcgatcgtcgatttattgacccc
cggattgttcatcacATAATTtatacgggaaatcgaaagtaaattcattc
agcttgtgatgtttgagagcttggatgttgggaagctgcaagaataaagc
cagacgatctcaatcgaacggaatcgacgatcgaaacagtcgaacaacaa
tcgaaccaatcgaatattacctagaattttgacgttcgattgagattcaa
ttgcgttcgacaatcgaatttcaatcggtcgattgcgttcgatttggttc
gatttggttcgattggttcgatcgtcgattccgttcgattgagatcgtct
ggctaaTAGCATAGTTTTGGAAATCTCATAAAATCTCATCAAGTTTCAGA
CATGGGGTGGGACTGTTTTCaggttttcaattttgacttGAATGAATTGT
GGCTTGTGTGGAAAATTTGCGCATTTAGGTACACGCTAGATTAACAAATT
GTGTAGaaagaccggtctgtaaaatactgcCAGATATTCagacaattttg
aaaactttttagactATTTTCATGAATCCCAGCTTGTGTGCAGAATTTCA
GGTAAATCGGACCACGGGATCCCCTTTTTTGGACCAgaatgtgtaattta
cagaccggtctgtaaaataccgccagatattctgaaaattttgaaaattg
agatTTTGACTTGTTTCATGAATCCCAgcttgtgtgcaaaatttcaggta
AATCGGACGACGGGAtcacttttttttatcaaaatgtgtaatttacggac
cggtctgtaaaataccgccagatattccaaaaaaattttaatttcagatT
TTGACTAGTTTCATGAATTCCAGcctgtgtgcaaaatttcaggtaAATCG
GACCATGGAATCACctttttttgatcaaatttttactttgatCTTTGAAT
TAGCTGgtgggtctgtaaaatacacatgttCCAGAGAataatttttactt
tattttcaaaacttggAAGCTTACATCCATGTCCAACTCTcttgaaaatt
tcagaacaaTTGAATAAGCCGTTGTAATGATATTAAATTTTGAATctgaa
aaagtgttttttttcactgtttttggtGCCGTCAGCTCTTACCCATTTAG
CCTAAGCCATTTGTTACCGAAAGAGCTGTTTTTTAAGCCACAAAAAATGG
CATATCTTCGGAACCGCCTTTTCTGAGAGGTctttgacccctcattttct
tgcattttttaccctttttcagaTGGACCTATTTTCAAAGTGATtagatg
agtttgaaattttgccctGACCTCCCTACTATCAGCCAGCAAAAAttgaa
tgacacttgtaaacttaagtttcttaccattttccatcgaaaacaatcga
aaacgtTACTGCTTCCCAAAGCGggagaccaaagcaaatgatctttcttg
atgagggcgcccttttggatctattgttaactcatttaaaatggtggaca
gagttgcggAATGACGAAGGCGCCCACTGCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
GCGAAAGCGCGAACgacatttcacaattataagaatatcttatgtgctta
attctatttaactttgagagcttcatggaagatgaagaagtagaaagatt
aaaaatgcgctggttaattttttttaaataggtgtgttctatcattgttg
aaagttgaagaaatttctaccgacgcaaaatttttttacagccaattaaa
ggcacagtctgcttatacttaccagttaggaacatttggcgagttcctgt
acgcggccgcaatcaaaagaatcataacatcactcattaaaaaatggcgt
tcgtgtcttttcgcattttttttagcctagacgatgtagcaaacatagta
agtataagcacactgtgcttttaattggctgagattttttttgcgtcgga
aaaactttttcaaactttcagcgatgattgaccaaactgttacaatgaaa
attatccagcgcattttttatcttcttaccttcttcattttcaatgaagc
actcaaagtttactgaaggtaagccacataagatattcttataattaatg
atattcattgaaacacgcttcgttgtgcgctgcggtggagtgcatgacgt
aactcacGCGGCAattaactcgccttctgttggaagatcatattgggcgt
tttggcgttaccaccctcaaagcagcgggcgcctttgtctttccttaact
ctttccaccattttagatggccttaacaatagatccaaaagggcgccata
atcttggaagataatttgttttggtctccggctttgggaagtagcaatgt
ttttggttcgatggaaaatggtaagaaacttaagttacaattgtcattta
gtttttgctggcttatagaatggcaggatcctggatggtttccctaactg
ctTACCATGTTTGCTATATCATCTaggcaaaaaacggtaaaaaagacaca
aacacaatttttttatgagtgtggttatgatttttttgtttgcggccgcg
tacaggaactcgccaaatgttcctaactgaagtTAGCGGAAGAATGTTTG
CTTAATtcctggggggggggtacttaggcaaaaatgggtgatgGGTATAT
GCAATCAAAGctaatcgaaactaatcgaacGTCAATCAAACACCAATCGA
ACGGTAATCAAAtccaatcaaaaaaaagatgtgaaattcgattggcgttc
gatcaattcggctaatcgaaaatcaattattcgattggcttcgattaagt
tcgattgattcggtaatcgaatttttcgattgacatcccctggagtATCA
GTGTGGCTCGAATCCTTtagatccttggttagaaaaagctatacctgttt
acttttttcttacCAGATTtaacaagccatcaaccaacaaaattaccACT
GACATCTGAAAATTCACACAACCTTTCCACAGtagacacttctaaattat
ctgccattatgaagatgttccgaaattaaccaatcgggtttacaatcgga
attcctctgggagttagcgagtcaggaaatgTAAAGTGACGTAATAAgaa
aatactgtttttccggggtataaataaaagaaaattgaaacggtttattt
ttttcttcattaggcggtcatcgaaaaattgttctattcgcgtcacccgc
ccgcatcaaattttccgctgattttccggtgcggagatgcggaaaaaaat
ctgggaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNagcttttttctcaattgctctgacgaccatcgaaaaatt
gttttgctcgcgttaccacccgcccctgagttactggcgtgattaaaaaa
acccAGGAATGTTTatgaccgcccgtccgcccgcatgcatttttaacacc
cgttgcgacgcgaacagagcattttttcgatgaccgccttacATATTTAA
GTTATTCCGttatcaaaattctagaaatgctaatttgtagaccatattag
aaaatgtttatatatttcgcaaaataaacacttaaaAAAAGATATAACTT
ACTATTTGTGGATTTTTAACaaacgagttgcgagttggtcctacgagttg
cgagttgctatCAAATATGCAAGTTGCGAGTTGGTTtttgcgagttgcga
gttacgagttgctattttaaccaaataaaagtgtgagttgcgagttgaaa
atttcacgttaagacataaaaatcgcgagttgcaaattaaaatcgcgagt
tgcaaattaaaatcgcaagttgaaaaatcaaaagtgcgagttgaaaaatc
aaaagtgcgagttgaaaattaaaatcgcgagttttAATGTGTGAGTTTCA
ACCAGTGTGGAGAATTTTGTTGTTAGGGCGACATGTCTAGgttcaaaatt
ggagaaaaGTTTTGTATTGGAAGCATAAAAGCTGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTgggaatttttttctggaaaaac
cagTAGTTAACCTTCGAATTCCGCGCTGGACGCTGCTTAACCTTAAGCTA
TCAACACACACGTACACTCACGAATAACCCCCCATCCTGTGCTGTGCCGT
GCTGCTTTTTAAATTCCGCACGCGCGCGCATTATTTCATATGGATAAGCT
ATGATATTGTAAACACGGTGAGTGAAGTATATCCTATCTCTTCAATATCC
AACTATCTCTTCAATATCCAACTATCAACTACCATAATATGTACAAAAGA
TAAACTCAAAATGTATCGGCGCATGCGTATAACGAACAATGCATATATAG
TATAAAGAACAATAATATATCTATTATCTTATTTCNGCAACTCGCAAAaa
ccaactcgcaactcgcatatttgatagcaactcgcaactcgcaggaccaa
ctcgcaactcgcatattaTCAATTCACTACTATTTTTACCCCTGCTTTTT
AAACAGCGTCTTCTTCTGTGGGCGTGATATCAGGCGGAGACGAAACGACG
CCCTCATCGTAAGATTTCGGGTCGTCTTATTGTTTGTTCATTTTGTCAAG
TCTGTCGGTCCTATTGTTCATGCTAAATCCATACACGATGACGTCAATGT
TTGGcggcatacctgaaaataaaaacaaaaagattattattatttttgca
taaattacgctaccttatacgttattataaaattatacaaaacaaaAGCG
AGTCTAGGCTGCCCGCCTAGAGAGCGCTagccctaatattttttctctcg
cagccttcaattttagcgatttctcaaGATATCTtcaagatatgaataca
aaattttgaccatagtttggaaatgtaatctagagggttttgggcataaa
tttgtttgataaaatttttacagtatacccttggttgtcaaaacgcaggt
ttggggcccccaaaacgcaggtgtagctaaaatcaaattattaagcccgg
tGGTAAAagggggagaaactatgaacatatttgtgttttccattAAATTT
ACGACCGATGCATGTAAAATTCCAaacaaagtccaaactgaaaatttaga
aattttcaaaatgacaattttgatttaacaacgtcttaatcaagtttctg
aaaaccaatttcttttgaatatagttccattcatgtatggaatatgctgt
gaaaattttagaaaagcagcttaactgaaactgaaaatattaagctttaa
aggtatttttctcctacattttggaaaaaaatgacagaatttgcagtttt
tgctgattcagcgaaaaattttatatgtaatattaattttttgttataaa
ctattatttttcaagctgataggaatggaattccaagattttttgctgtt
tctcatatttagaattttcggttttatcaatgctgattctagggccccaa
catactggttgaccttaaagatgctatatcttttacccatcgtctaaagt
cacatatgtatctaaattttctgaacggcattaggtgtagaaagtttcct
ataccccattttcataacttattttcaatatccaagtagctagagtgagt
tatatgaaatttttatctaactttggtgttaaaatatttccttaagACGC
AAacatgttattttgaatccgtctcaaaccatcaaaaacatgttcatttt
taagtataaccatcattctttcaaaataaacaaaaatcgtttaattctga
taaatttaCAAGTGAgtatcctcattttaatgatgaCCTCCGTTTTGgag
gccgtctccgttttgggggccatatactgtaatttttatttcaatttagg
aTGGCAAAACAGAATTTCAAGCTCAAGTTTCACATGTTATGTGGATTCCT
GAAGAAGAACTCACCAATCAATATGCAGAACTGATCAAAGCTTACTTCTC
AAAGGTAGGTTGATGAGATTAATCAGATAAGGAATGTAAATTATCCCTGC
CAATAATTTTCTATATTAGTACAtcgactttttaaaaataatggcATTTT
tgggaaaacgttaaaaaatgagaaacaaaaagGAGTGAAGGTAAAATTGC
TCCTTCATAGCCTTTGCTTATTATATTAAAACAGCGTTCAAATTTTGGAA
GCAGTGGAGCTTAGTTAGCCatggaatgtcttcttttgTACTTGACCACT
TCCAAAACCTTTTTGAATTGATGGAGTGTATTCGCATACTGTAATGTGTT
AAAAACAGAACTGAATGAAAAAATCTGAGCCTTTAtgtgcttataagcgt
tatgttTATAAAAACATGAATTTGTCGACGAATGGAATCAGTACAATCAG
ACACCATTGCTATGATGTCAAAAAGCTGAGGGTGATTTTGAAAATGCTGA
TAaatgattaaaaacaaaaaacacttagttttgatttttgtctTTAAAAT
ACCTGTTTCTCCATCAAACAGGTACCTTCAGAAGAGACTATTCAATCAAG
TCCTCAAGAAACAACAGAAATTGAGGAGCTggagaaaaaaacgaaaagcC
TTAAGATACAGAGAAAGGAAAGTGTAGTTGTCGAAAGCGAAGTCAAAGAA
ATAGTGACCAATGACAAAGGtaagtttttcatgtttttttccaTAGTCTC
TATGATTTTTGCATCCTGAGTAAGATGATCAAAGATTAGACTTATCATTC
TCTCTTGTATATAGCTTTGGAGGAAATTCGTCCCCTACCCACCAAAACTT
TCCGCTCAAGGAGCCCCACCCAACCCCCATTTAATTTGACCATCTTTGAG
ATTATGAGATTACCTTAGCTAAGCACCCATTGAGTGTCGTCACTCCGTAA
CTTCAAatgttcaattattttttaatatcAAATACGCCTGAACACTTCAA
CTAAACACAAAATGTCAATCTGTTTTTTTATTCAGTCGGggtaaataaaa
aaacagggCCACACGGGTAAacatttttcgagttcagaCCTTAAGTCTAT
TCACgttaagtgtgcactcttttttcttttacctataacttttgaaggca
gttgaaggaattcttcaatctttataaatttggtatcattggaaagatat
tagtgagtggaacaattcaaaataaaaaaatctttaaagaaattctaaaa
atgaagatgaaaatgaagaagaaaaaaatgaagatcttgtagaaaagtgc
tataactttcattttcactggagagattctttgatcttaggaggtcatca
ctgtgaagaaatttcattaaaatatttattcagtataaagttatgataca
aaattaataagtgattgaccccccaaaacagcagaaaacagcgtttttag
acatcaatcagcttataactttgtttgatatattTTTACTGACATTACTG
GCATTTTTATGAGCTACTTTcgttttttccttaaaacaAATTGTGAATTT
GTTTTAGGAAAGCAAACTGATGCGAACATTCTTCCAACTGAAAATGTATC
TCCAACAATGTCCAATTCACCAATTACAACAGCACCAATGGGTAAGAAAC
GCAAACGTAAACAAATTGATCCTGACAAAGTGTTATGGCGAAGTAAAAGA
CTGAAGGAGAATGATGAAAAATTGGCTGCCTCTTCTTTCAATTGTACCGT
CTGTCAAAAATCATTTCGACGTGAAGATATCTATCTTGCACACATGCTCG
ATCACGACCAAATTGGTGAGCAATCAATCCTTGTCAAAAAGAGGAAATAT
ACTAGACGAGAGAAGAATCTATCTGATGATTTGTTTACCGTTTCCGAAGA
AAACAATATTCAGAAATATCAGTGTCGTTTATGTGCTCATGTGTTTTTAC
AGCTTGACGAAGCTCTCGCGCATCAGAAACAACATGCTAAATCGTCCAAT
CAAATGTACTGTGGTATGTGTGACAAACATTTCGTTAGAAAAGATGCATT
CGCGAATCACGTGGAAAGCCATAAAGGAGTCACTTCATTCGAATGTGATA
GATGTGGCAAGTGTTTTGCAAGCCTCGATGCAATCTCCAAACATAAATTG
AACTCTTGTAAACAATCACTCCTTACATTTCACAAATGCACCATCTGTGA
ACAGGATTTCGACAGCCAAACAGCATTAGATGCACACGAGCCGTGCAATA
TTGAAGGACAAGTTGAATTTTGTTGTGAACCGTGTGGTGAGTCATTCTCA
GTGAAAGCCGTTTTCGAAGAACATTTGAGATCTCATGAAATGCAGATTAT
TGATCCACACACGTGTGCGACATGTGGTTTGAAATTAACGTCGAAGACAG
AGTATGAGGAGCACGTCAAGACTCATGATTATGATATCTATCGATGTCAT
TGTTGTCATGAAGTTTATAACTTGTTGGAAGATCTTGAAATGCATTATCA
AATGTCTGAGACATGTATAGAAGTTACGTGTACCGATTGTAAAGTAAATT
TCCAGAGTAGTAATGAGTTGAGAACGCATTTGAAAGAACAAACACTAGCT
GCTGCTACATTGGCAGGGGAAGAAATCGACATAGAAGAGACTGAAGTTTT
TATTTGTCGTTTTTGTCAACGTGGCTTTCATACTAATGATCCGTACGTTG
CTCACTTGAAAATCCATTCTTCAGACAAGTTGAAAGCATGTGATACGTGT
AATGAGACTTTTGAAACGGAGGAGAAGCTAGGTATCCATTACCGTTTGGT
ACATCATCGGAATACCAAATTCCCTTGCATCGAATGCGGCCttattttta
gtgaaaaagcacAGCTAAAGAAACATTGTAAAGAAAGTCATGCTAACgat
aacattttcaaatgtttACCGTGCGGACGTACCTTTTACCAGAAAATCGA
ATTCAATCGACATATTGTGACTAAGCAACATAATAAACGTGTAGTGGAAG
CTGGCTTGGCGGATAGCACACAGTCACAACTTGAAGGGATTAGATGCCCA
ATATGTGAGAGAGTATGCGCTAATAATCGTGAATTGAAACGTCATCAATA
TGATCATCAGAGAATCCAATCCAAACCACAGCCTGAGAAATTGTTAAACC
GTGATCAACAAGTTGTTGTACCGACCAGTGAATCAGTACCAATTATATTG
AacgatttttataattttgtagACGGGGAACATGTTGTTCTCACAACAGA
TGATGCTCAACAAGCGGGAGCGCCAGATTTACTAAACGCTAGGCTAGATA
TTGATTCTGAAGGGAATATTGGTATTATTTATGTTGACAAAGAGGAAGGT
GAGGCTTCTGTAGAAACAGTGCCAACTGCTGATGCGGACGTTGAACACAT
GCTAGTTATTAAAGACGATCAAGAACAGGCTGAAATCTCTACTGCTAGTG
GACATGTAAACGAAGAAGCTTTCTTAGCACTCACGGAAATGGTAAAACAG
GGTAAAATTGATTTGTCAAGTTTCCAAGTGATTCAAGAAAACCCGAAAGA
ACCGTAATTTATTAAGTTTgactttttgtgtttttttttgtgagattttt
gcttatttttggcaattcttttatttaattcttctaatatttttctttac
atttGTTTTCAATCATAGTTGTCCACTTCAAAACGCTCTTCAAACTTATT
TTTGATTTCAGTTTTTCAATCCTTCCAGGccgtgtgttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063890-exon-scaffold_404-1491911889:533075..533168 | TCONS_00063890-exon-scaffold_404-1491911889:533075..533168 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1510915933:533075..533168 | TCONS_00063890-exon-scaffold_404-1510915933:533075..533168 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1575043694:533075..533168 | TCONS_00063890-exon-scaffold_404-1575043694:533075..533168 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1491911889:543037..543128 | TCONS_00063890-exon-scaffold_404-1491911889:543037..543128 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1510915933:543037..543128 | TCONS_00063890-exon-scaffold_404-1510915933:543037..543128 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1575043694:543037..543128 | TCONS_00063890-exon-scaffold_404-1575043694:543037..543128 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1491911889:543646..543793 | TCONS_00063890-exon-scaffold_404-1491911889:543646..543793 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1510915933:543646..543793 | TCONS_00063890-exon-scaffold_404-1510915933:543646..543793 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1575043694:543646..543793 | TCONS_00063890-exon-scaffold_404-1575043694:543646..543793 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1491911889:544632..546813 | TCONS_00063890-exon-scaffold_404-1491911889:544632..546813 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1510915933:544632..546813 | TCONS_00063890-exon-scaffold_404-1510915933:544632..546813 | Clytia hemisphaerica | exon |
| TCONS_00063890-exon-scaffold_404-1575043694:544632..546813 | TCONS_00063890-exon-scaffold_404-1575043694:544632..546813 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_404 | supercontig | scaffold_404:533075..546813 + |
Blast
BLAST of TCONS_00063890 vs. Swiss-Prot (Human)
Match: ZN133 (Zinc finger protein 133 OS=Homo sapiens GN=ZNF133 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 4.122e-35 Identity = 123/486 (25.31%), Postives = 197/486 (40.53%), Query Frame = 1
Query: 475 RLKENDEKLAASSFNCTVCQKSFRREDIYLAHMLDHDQIGEQSIL--VKKRKYTRREKNLSDDLFTVSEENNIQKYQCRLCAHVFLQLDEALAHQKQHAKSSNQMYCGMCDKHFVRKDAFANHVESHKGVTSFECDRCGKCFASLDAISKHKLNSCKQSLLTFHKCTICEQDFDSQTALDAHEPCNIEGQVEFCCEPCGESFSVKAVFEEHLRSHEMQIIDPHTCATCGLKLTSKTEYEEHVKTHDYD-IYRCHCCHEVYNLLEDLEMHYQMSETCIEVTCTDCKVNFQSSNELRTHLKEQTLAAATLAGEEIDIEETEVFICRFCQRGFHTNDPYVAHLKIHSSDKLKACDTCNETFETEEKLGIHYRLVHHRNTKFPCIECGLIFSEKAQLKKHCKESHANDNIFKCLPCGRTFYQKIEFNRHIVTKQHNKRVVEAGLADSTQSQLEGIRCPICERVCANNRELKRHQYD---HQRIQSKPQPE 1914
+L + E L + NC C SF + L+H H GE+ + V ++ ++ + K+L+ S E I CR C F + + H++ H+ M C C + F +K H +H G + C CGK F+ A+ +H+ ++ + C+ C F ++ L +H+ + G+ + C+ CG F + H R+H + P+ C CG + + H +TH + Y C C ++L L H + + C DC F + L H + T +GE + +C C RGF VAH + HS ++ C C F + L I ++ H R + C +CGL F K+ L H K +H+ + C CG+ F QK H +T K V C C R + L RH+ H R+ +P PE
Sbjct: 201 KLLKRIEVLGFGTVNCGECGLSFSKMTNLLSHQRIHS--GEKPYVCGVCEKGFSLK-KSLARHQKAHSGEKPIV---CRECGRGFNRKSTLIIHERTHSGEKPYM-CSECGRGFSQKSNLIIHQRTHSGEKPYVCRECGKGFSQKSAVVRHQRTHLEEKTIV---CSDCGLGFSDRSNLISHQRTH-SGEKPYACKECGRCFRQRTTLVNHQRTHSKE--KPYVCGVCGHSFSQNSTLISHRRTHTGEKPYVCGVCGRGFSLKSHLNRHQNIHSGEKPIVCKDCGRGFSQQSNLIRHQR-------THSGE-------KPMVCGECGRGFSQKSNLVAHQRTHSGERPYVCRECGRGFSHQAGL-IRHKRKHSREKPYMCRQCGLGFGNKSALITH-KRAHSEEKPCVCRECGQGFLQKSHLTLHQMTHTGEKPYV----------------CKTCGRGFSLKSHLSRHRKTTSVHHRLPVQPDPE 641
The following BLAST results are available for this feature:
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