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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063844 ID=TCONS_00063844|Name=TCONS_00063844|organism=Clytia hemisphaerica|type=transcript|length=1162bp
ttttaggattaggcccgggaaaactttttatgaccaaaatagtgacgcca
taggcacaACTGCAAGGGAAATAAGGGGCAGAGAActagctgattttcaa
aagtcaaaataaagagaaatggttgataccatctgaaagagcatgaaatt
ctgagcagaaaaatgtattacaataactctctgactaaaagacacaaaga
aatacagccgcctgaagttcaaaaacataccgacgtcaggTACCATCAAA
AGACAAGATCTGACGTCAAATCGCAGTAGAGcccccaacctcgtccccgt
gtatcccatgctttatttacgttactgattgacgccagagaatattatct
agcgctatcagtaagaatcaaaaagctgataaaacgcagggaacgaggtt
gtagAGCCCCCTACTATCAGAGATGTGCGAACGAGAGTACATAAATTCCA
TCAAAGTGACTCGTTCTTCAAGAGAAAAACTAAAAGATCACCAAAAAGTG
TATGAGGAAGATGCCAAAGAGCAAATGAAGATCAAAATAGCGATCAGGGC
AGACAAACGGAGGGACAACCAAAAACAACTTGATGACATCAAAGAAGAGA
TTCAATGCCAATTGAAGCTAAAATCGATTGAAGCCTCTACGGAGAATGGT
GCTTCCCTTTGGTTGACAGCTCTGCCAATCAAGTCAAATGGATTCTATCT
TGAGAAACAAGCCTTCTGGGATGCAATCTTTACTCGCTATAACATCCCGT
TGAAGCGTCTACCAACAACATGTGTCTGTGGTTTGGCTTTCGACATCCAA
CACGCAATGGACTGTCCTCGGGGCGGTTTCATCATCTCCCGACACAACGA
GCTTCGTGATCTTACCGCCGATATCGCAAAAGAAATCAGCATCCATGTTA
TAGTCGAACCTACACTTACTCCATTGACTGGCGAACGGATGACATACAAG
ACAACCATCAAGACGGAAGGATCGAGAACGGATGTCGCAGTCAAAGACTT
CTGGGTGAAGGGGCAATTAGCATTTGTAGACATAAGGGTTTTCAACCCAT
TAGCTAAGAGCCACCTTAACCAGAGTCTTCAGGCTGCACACAAGAAGAAC
GAGAACGAGAAAAAGAGGTGCTACAACGAAAGAATTCGAACCGTGGAAGG
AGGATCGTTCAC Run BLAST on NCBI protein sequence of TCONS_00063844-protein >TCONS_00063844-protein ID=TCONS_00063844-protein|Name=TCONS_00063844-protein|organism=Clytia hemisphaerica|type=polypeptide|length=246bp
MCEREYINSIKVTRSSREKLKDHQKVYEEDAKEQMKIKIAIRADKRRDNQ
KQLDDIKEEIQCQLKLKSIEASTENGASLWLTALPIKSNGFYLEKQAFWD
AIFTRYNIPLKRLPTTCVCGLAFDIQHAMDCPRGGFIISRHNELRDLTAD
IAKEISIHVIVEPTLTPLTGERMTYKTTIKTEGSRTDVAVKDFWVKGQLA
FVDIRVFNPLAKSHLNQSLQAAHKKNENEKKRCYNERIRTVEGGSF Run BLAST on NCBI transcript from alignment at scaffold_403:95700..96861 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063844 ID=TCONS_00063844|Name=TCONS_00063844|organism=Clytia hemisphaerica|type=transcript|length=1162bp|location=Sequence derived from alignment at scaffold_403:95700..96861 (Clytia hemisphaerica)
GTGAACGATCCTCCTTCCACGGTTCGAATTCTTTCGTTGTAGCACCTCTT
TTTCTCGTTCTCGTTCTTCTTGTGTGCAGCCTGAAGACTCTGGTTAAGGT
GGCTCTTAGCTAATGGGTTGAAAACCCTTATGTCTACAAATGCTAATTGC
CCCTTCACCCAGAAGTCTTTGACTGCGACATCCGTTCTCGATCCTTCCGT
CTTGATGGTTGTCTTGTATGTCATCCGTTCGCCAGTCAATGGAGTAAGTG
TAGGTTCGACTATAACATGGATGCTGATTTCTTTTGCGATATCGGCGGTA
AGATCACGAAGCTCGTTGTGTCGGGAGATGATGAAACCGCCCCGAGGACA
GTCCATTGCGTGTTGGATGTCGAAAGCCAAACCACAGACACATGTTGTTG
GTAGACGCTTCAACGGGATGTTATAGCGAGTAAAGATTGCATCCCAGAAG
GCTTGTTTCTCAAGATAGAATCCATTTGACTTGATTGGCAGAGCTGTCAA
CCAAAGGGAAGCACCATTCTCCGTAGAGGCTTCAATCGATTTTAGCTTCA
ATTGGCATTGAATCTCTTCTTTGATGTCATCAAGTTGTTTTTGGTTGTCC
CTCCGTTTGTCTGCCCTGATCGCTATTTTGATCTTCATTTGCTCTTTGGC
ATCTTCCTCATACACTTTTTGGTGATCTTTTAGTTTTTCTCTTGAAGAAC
GAGTCACTTTGATGGAATTTATGTACTCTCGTTCGCACATCTCTGATAGT
AGGGGGCTctacaacctcgttccctgcgttttatcagctttttgattctt
actgatagcgctagataatattctctggcgtcaatcagtaacgtaaataa
agcatgggatacacggggacgaggttgggggCTCTACTGCGATTTGACGT
CAGATCTTGTCTTTTGATGGTAcctgacgtcggtatgtttttgaacttca
ggcggctgtatttctttgtgtcttttagtcagagagttattgtaatacat
ttttctgctcagaatttcatgctctttcagatggtatcaaccatttctct
ttattttgacttttgaaaatcagctagTTCTCTGCCCCTTATTTCCCTTG
CAGTtgtgcctatggcgtcactattttggtcataaaaagttttcccgggc
ctaatcctaaaa Coding sequence (CDS) from alignment at scaffold_403:95700..96861 >TCONS_00063844 ID=TCONS_00063844|Name=TCONS_00063844|organism=Clytia hemisphaerica|type=CDS|length=738bp|location=Sequence derived from alignment at scaffold_403:95700..96861 (Clytia hemisphaerica)
GAACGATCCTCCTTCCACGGTTCGAATTCTTTCGTTGTAGCACCTCTTTT
TCTCGTTCTCGTTCTTCTTGTGTGCAGCCTGAAGACTCTGGTTAAGGTGG
CTCTTAGCTAATGGGTTGAAAACCCTTATGTCTACAAATGCTAATTGCCC
CTTCACCCAGAAGTCTTTGACTGCGACATCCGTTCTCGATCCTTCCGTCT
TGATGGTTGTCTTGTATGTCATCCGTTCGCCAGTCAATGGAGTAAGTGTA
GGTTCGACTATAACATGGATGCTGATTTCTTTTGCGATATCGGCGGTAAG
ATCACGAAGCTCGTTGTGTCGGGAGATGATGAAACCGCCCCGAGGACAGT
CCATTGCGTGTTGGATGTCGAAAGCCAAACCACAGACACATGTTGTTGGT
AGACGCTTCAACGGGATGTTATAGCGAGTAAAGATTGCATCCCAGAAGGC
TTGTTTCTCAAGATAGAATCCATTTGACTTGATTGGCAGAGCTGTCAACC
AAAGGGAAGCACCATTCTCCGTAGAGGCTTCAATCGATTTTAGCTTCAAT
TGGCATTGAATCTCTTCTTTGATGTCATCAAGTTGTTTTTGGTTGTCCCT
CCGTTTGTCTGCCCTGATCGCTATTTTGATCTTCATTTGCTCTTTGGCAT
CTTCCTCATACACTTTTTGGTGATCTTTTAGTTTTTCTCTTGAAGAACGA
GTCACTTTGATGGAATTTATGTACTCTCGTTCGCACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063844-exon-scaffold_403-1491911889:95700..96861 | TCONS_00063844-exon-scaffold_403-1491911889:95700..96861 | Clytia hemisphaerica | exon |
| TCONS_00063844-exon-scaffold_403-1510915933:95700..96861 | TCONS_00063844-exon-scaffold_403-1510915933:95700..96861 | Clytia hemisphaerica | exon |
| TCONS_00063844-exon-scaffold_403-1575043694:95700..96861 | TCONS_00063844-exon-scaffold_403-1575043694:95700..96861 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_403 | supercontig | scaffold_403:95700..96861 . |
Blast
The following BLAST results are available for this feature:
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