TCONS_00063828 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063828
Unique NameTCONS_00063828
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063828 ID=TCONS_00063828|Name=TCONS_00063828|organism=Clytia hemisphaerica|type=transcript|length=149bp
CTTTTTCTTCACATATATCTTGAGtgaatcgcgaaaattaatacacgcga
aaaatttgGATACATGAGCATTCAGAATAACTATCTTTTTGCAAAAGAAT
TTTATTCAATGttcattttttctcaatgtACTAAATAATTCAATCCAAC
Run BLAST on NCBI

transcript from alignment at scaffold_402:27633..27781

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063828 ID=TCONS_00063828|Name=TCONS_00063828|organism=Clytia hemisphaerica|type=transcript|length=149bp|location=Sequence derived from alignment at scaffold_402:27633..27781 (Clytia hemisphaerica)
GTTGGATTGAATTATTTAGTacattgagaaaaaatgaaCATTGAATAAAA
TTCTTTTGCAAAAAGATAGTTATTCTGAATGCTCATGTATCcaaattttt
cgcgtgtattaattttcgcgattcaCTCAAGATATATGTGAAGAAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_040018XLOC_040018Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063828-exon-scaffold_402-1491911889:27633..27781TCONS_00063828-exon-scaffold_402-1491911889:27633..27781Clytia hemisphaericaexon
TCONS_00063828-exon-scaffold_402-1510915933:27633..27781TCONS_00063828-exon-scaffold_402-1510915933:27633..27781Clytia hemisphaericaexon
TCONS_00063828-exon-scaffold_402-1575043694:27633..27781TCONS_00063828-exon-scaffold_402-1575043694:27633..27781Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_402supercontigscaffold_402:27633..27781 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063828 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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