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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063665 ID=TCONS_00063665|Name=TCONS_00063665|organism=Clytia hemisphaerica|type=transcript|length=1000bp
gcttagatttctaggctacctCGTGGGAAGGTATAGCAGTAATTAAAATG
ACAAGATGTCGgcatttgaaaaattgttaaaTTATTTAATAATCAACTCT
TTCCCTTTCTGGGTTCCGTGTCTCTTAACAATGCCTTTAACTTGGGGCAA
AAACAGGCGATTTGCCTTTGTAAAGCAAAGAAATTTCCGCcctaaatttg
aaatgaaaatattaagaacagaCAGCGTTTTTAAAGttcaacaaagttcg
attaaaaaaatcgTTCGATCTGTGCATCTAGCGACTTGTAAAATGGTCAT
GagttcttcataaagacgaaagacatatCTGGACTTATTTCATATTCTCC
AGTCTCTTGTtagtagtttttctgactttctgggaCTTTGTGAGTTTTTT
CTATGTTTCTCAACTGATTGAATGCCTTTACCAAAAGATCGTCAccgatg
ggattcgaacccactaaatgcaaagttccgctGATCAGGAACCCAACGCC
TAGATCACTGTGCCACGGATTTTTGCCAGAAGACCGTTTCTAAcagctat
ttatattgtacaaactacagaccataCTATATTAAGAGGAAATAGCAAAA
GCGTGCTTGTTtcaagctccaaccctaaccctaactgataataacccaaa
tCCTAGCCAATTTGATAcataaccacacccaaaccacacccatacccaac
cctataCTAGGTCTCGCCTGTAGGTCCTgacactacatgtttttttttta
taagcatataaaaatccgaaaacaggctcagagatgcttaggtcgaaagc
ttaataaggctgaaaaatgcttgagggatgcttatatcctaatacttaat
actgcTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNat
gcttatatcctaatacttaatactgcTTATATACTGCTATACTACTATAA
TACTGCTTATATCCATACTACAAAGTAgcttatacttttttcataggctc Run BLAST on NCBI transcript from alignment at scaffold_397:147119..148118 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063665 ID=TCONS_00063665|Name=TCONS_00063665|organism=Clytia hemisphaerica|type=transcript|length=1000bp|location=Sequence derived from alignment at scaffold_397:147119..148118 (Clytia hemisphaerica)
gagcctatgaaaaaagtataagcTACTTTGTAGTATGGATATAAGCAGTA
TTATAGTAGTATAGCAGTATATAAgcagtattaagtattaggatataagc
atNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAgcagt
attaagtattaggatataagcatccctcaagcatttttcagccttattaa
gctttcgacctaagcatctctgagcctgttttcggatttttatatgctta
taaaaaaaaaacatgtagtgtcAGGACCTACAGGCGAGACCTAGtatagg
gttgggtatgggtgtggtttgggtgtggttatgTATCAAATTGGCTAGGa
tttgggttattatcagttagggttagggttggagcttgaAACAAGCACGC
TTTTGCTATTTCCTCTTAATATAGtatggtctgtagtttgtacaatataa
atagctgTTAGAAACGGTCTTCTGGCAAAAATCCGTGGCACAGTGATCTA
GGCGTTGGGTTCCTGATCagcggaactttgcatttagtgggttcgaatcc
catcggTGACGATCTTTTGGTAAAGGCATTCAATCAGTTGAGAAACATAG
AAAAAACTCACAAAGtcccagaaagtcagaaaaactactaACAAGAGACT
GGAGAATATGAAATAAGTCCAGatatgtctttcgtctttatgaagaactC
ATGACCATTTTACAAGTCGCTAGATGCACAGATCGAAcgatttttttaat
cgaactttgttgaaCTTTAAAAACGCTGtctgttcttaatattttcattt
caaatttaggGCGGAAATTTCTTTGCTTTACAAAGGCAAATCGCCTGTTT
TTGCCCCAAGTTAAAGGCATTGTTAAGAGACACGGAACCCAGAAAGGGAA
AGAGTTGATTATTAAATAAtttaacaatttttcaaatgcCGACATCTTGT
CATTTTAATTACTGCTATACCTTCCCACGaggtagcctagaaatctaagc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063665-exon-scaffold_397-1491911889:147119..148118 | TCONS_00063665-exon-scaffold_397-1491911889:147119..148118 | Clytia hemisphaerica | exon |
| TCONS_00063665-exon-scaffold_397-1510915933:147119..148118 | TCONS_00063665-exon-scaffold_397-1510915933:147119..148118 | Clytia hemisphaerica | exon |
| TCONS_00063665-exon-scaffold_397-1575043694:147119..148118 | TCONS_00063665-exon-scaffold_397-1575043694:147119..148118 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_397 | supercontig | scaffold_397:147119..148118 . |
Blast
The following BLAST results are available for this feature:
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