TCONS_00063656 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063656
Unique NameTCONS_00063656
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3655

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063656 ID=TCONS_00063656|Name=TCONS_00063656|organism=Clytia hemisphaerica|type=transcript|length=3655bp
AAAGGTTTAATTATGTACTTACTCACTTAGTTGGTAAGAAGCAAATAACC
AAATATGACAAGCACGTGATAATCTTTGTTTTCCCACACTTAAATCGCCg
ccattttgattgttttgcttCTACTGAAACTGAAAGGTCTGGGACCTACT
GGCATTCTTGGAATTCTACCTAGGCTTCTTTTTGCAAAGAGGCAAAAAAG
ACTAGGTCCGGGGTTGCGTGATTCGTAGAAATGGTAGCctcaatttgaaa
aacaaaagcaaaaaaattctgGTACGTTTGGTGGTCGTCCATGACTTTCA
CACCACAAAAGAAGgtctttttaaaatcatttttgacattttctggATTC
AGGTATGGCATATTTTCTTAGCACAGAGTTCGAAGCATTGAAACATGATG
TCAACAAGCTGTTTTCAAAGTTTCACGAAAAGCAGAGTGTaagatttgat
gatttttgtgaggaatggaaaaaattgaactttagTGCACTTTTCGGTGC
AACTTACAGAAATACTCCTGGTTCAAAAATGAGGATTGCTGAGCGACTTT
TTCGTATCGCTAGTGAATTTCTTTCGGAAGACTCTACTTTTTTATATAGA
GTTGCTGCTATTTACACGTTTTATGCTGTGTATTTCAAGCAAGTTACTCc
tgtgaaaacaaaaataagaatGACTCCTGCCATGTGGACCGACCTGATGC
AATTCACGGAAGTTTTAAAGAAGCATAGTCACTATGATGTTGTCTATATT
ATTCATGTTTTACGCAAGAGTAAGGCATTTTGCTTTACAGCGTTTCCCAA
AGAACTTTTTTTCGGTAAAATAGAGTTTATGCTCGGTGTTGAAGGCATAT
CTGGATTTAAGCATTCTCAAGAGCGCAGCGAGTATCTCACAGAGATTCTT
GATGATGAAAGGATTGTACCAAAGCTCCAAGCAATCCAGAATGATTATGC
TGCTATAAAAGAGAAATTGATTGCAGAATCTCAGGAGAATGAGCGAGAAG
ATTTATCAAAGGTTCTGTTTTACAttaatcaagattttcctgaagACGTT
TCTACAATGATTAACTCTTACAAGAGGAAGTATGATGATTCAATGACAAC
CTATCAATCAAACGACGAGGCAACTCAAAGACCTGTTTTAACACAACTTC
GAAAGATAAAAGAAACTACCACTGCTCCTACTACTACTATCATTACTGAC
AGTGATTCTCAAGCGGAAGATGAAACACGTGCAtccaagatttttaaatt
gaaagaaaagCTATGGTCTTCCAACATtcaagttgacaaaagtaaaGGCT
ATGAaattaaaaaggagaaaaaaaaattgtcagcattggaggaaagtatt
gcagaaaaagaaagagaaaaggaAGATAAGAGACATTATTACAAGAAAAG
TGCAATGTTACAAGTTAAATCAAAGGTTCCAGGATCAAAATCGAAAAGCA
AACATCCTTATATACGGTTTGAACTTCCCACTCAAGCAGATGTCTATGAA
CATTAGTTTTCaagaaagaatattttaatattGGTATTTTTAACATTTGA
CAATTGCAAAATATAACCTGGTTTTTATGAACTAAAAGCATATTTAAATA
TCTTGGattgattataaaaaaattgtactcTGTCTTAAATCTCTCATTTT
GGATCAAATACAGGACATCACATATTTTGTACATTCTACGGTATCATTAT
ATATACGATGAAAAGGATATGAGGCTGTCTATGTATAtggtgttgttttt
ttatatttcttaaaaatctagTTGCTTGTAtaagtttgttgtttgtgatg
TTGTAGTTGATGTTGTGTTGCTTCCAAGGATAAACCAATGGGCGCGGTAA
GCGTTTTTACGGCAGGGAACTACCACTGTCAATCTGGTGTGTTGTTTTTC
TGATGGTGTTTTTGCAACTGGTgttctttctttgaaaattcaatttttat
agaGATTTATGGGGGAGATGTCTGTTTCTGTTCAAtttaagtttttataa
aaatttgtttatataatgtatttatttttcagaaaaataaaaaaaccatc
aaaatggTCTTAAGAAAACCAAAACGATAAAACAGATGTGGATTCGCTAT
caaaagatatcttcaaagaTGGCTTCATTTGATCCAAGAGAATTAACCAA
GAATAAAGAAGAAACAATCAAGTACCCTTTAAAGAGATTTGAGACAACAT
TAGGAAAATCATTGCGCATTGTGATTCTCACAAATTTAGACCGTTTGAGA
AAACATAGAAGTAATATTGAAAAGTTTGCCAAtgaaagaagatggaaaga
tCTCAATATGGAACAAATAAATGCATCCAGGACTGTACAGGTTTATACAG
GcctttattttcacttttgtttttagaattgttgaaataagaCTGTGTag
ctaaatctttgtttgcaagTTACATTTTAAATTTCACTAGACTCAGAGGA
TGGGAGGTCATCCCATCTAAAAGCTACCATATGTGCAAACAAGGGTCTCA
AAATCAAACCTTTACAATGCAGAGAAAATCAAGTCAAATTTGCGtaagtt
tcataaaaaaattgaccctAATAGTgcattattttgaaactttctaaggc
aaaaaatggtcagattgTCAAAATTTTGCCCGAAATACCTTGTTCTTGTC
AATTTTTCACACTTACAGGGAAGCCTGAAAAGCTAGGTTGCGACCAGACT
AGATTTTATCAAAGTTAATCTTTGCAAAGTGttaacaaaacaaaactaaa
atgaATCCTAAATAGGCTGTTTTGTCCTTATTTCTAGCAATTGAAAGCTA
CAATACGTGAATTAGACAAAGTAAAAGACCAATTGGTCGAAACTGATGTT
AATGCTTTCAAAAAGCGAATTGAACCAACAAGAAATGAAGCACTTGAGGC
TATACAAGAATTCAGTCGGCTTTATGATGTTATTTCAAGACAAGTCCAAG
ATTCTTTGCTGGAAGCTCAGAATGCTGAAGGTGATCTCGTTGAAGTGCCA
TTACAATCACCACCAACATCACGAGGAAATTCACCACAGATCAACACATT
TGAAGAAGGATCTCTTATGGGAAATATACAAATAAGAGATAACCAAAGGG
AACATGAAGAAATTGCTGTTTGCCAATCATGGGATCATTTGAGAGATGGA
TTGGTTGAACTTAACTTACTTGTCAAGGATTTTGCTGTTGTTGTCCATAA
TCAACAAGAAATGGTGGATAATATTGAAGATAATATTGAAAAAGCCCATG
AAAATGTTCGAGAGGGAACTGGGTTTTTGGCACAGGCCAGTAAATATAAA
GCCGCTGCAATCCCAGTTGGTGGTGCCATTGTTGGTGGAATCATAGGTGG
ACCCATCGGTTTAATGGCGGGTTTTAAACTAGCCGGTGTGGCTGCAGCTG
TTGGTGGAGGGATAGCTGGATACACAGgtggaaaatatttgaaaaacaaa
cacGATGCCAGAGTTGAAATGGAAATGAGtaatttgagtaagaaagatgA
CGATTTTCAAAGAAGGTGATATTCATGTCATTACAATATTTTCCGGGATT
ATTTTGATTTGTGGTGAGTGATTAAGTCATGAATTGATAGAATGTAATTT
TATCACATGGAATGTTATCTTGGAacatattttggaaattttttaaatat
ttaaa
Run BLAST on NCBI

transcript from alignment at scaffold_397:140684..146350-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063656 ID=TCONS_00063656|Name=TCONS_00063656|organism=Clytia hemisphaerica|type=transcript|length=5667bp|location=Sequence derived from alignment at scaffold_397:140684..146350- (Clytia hemisphaerica)
AAAGGTTTAATTATGTACTTACTCACTTAGTTGGTAAGAAGCAAATAACC
AAATATGACAAGCACGTGATAATCTTTGTTTTCCCACACTTAAATCGCCG
CCATTTTGATTGTTTTGCTTCTACTGAAACTGAAAGGTCTGGGACCTACT
GGCATTCTTGGAATTCTACCTAGGCTTCTTTTTGCAAAGAGGCAAAAAAG
ACTAGGTCCGGGGTTGCGTGATTCGTAGAAATGGTAGCCTCAATTTGAAA
AACAAAAGCAAAAAAATTCTGGTACGTTTGGTGGTCGTCCATGACTTTCA
CACCACAAAAGAAGGTCTTTTTAAAATCATTTTTGACATTTTCTGGATTC
AGGTATGGCATATTTTCTTAGCACAGAGTTCGAAGCATTGAAACATGATG
TCAACAAGCTGTTTTCAAAGTTTCACGAAAAGCAGAGTGTAAGATTTGAT
GATTTTTGTGAGGAATGGAAAAAATTGAACTTTAGTGCACTTTTCGGTGC
AACTTACAGAAATACTCCTGGTTCAAAAATGAGGATTGCTGAGCGACTTT
TTCGTATCGCTAGTGAATTTCTTTCGGAAGACTCTACTTTTTTATATAGA
GTTGCTGCTATTTACACGTTTTATGCTGTGTATTTCAAGCAAGTTACTCC
TGTGAAAACAAAAATAAGAATGACTCCTGCCATGTGGACCGACCTGATGC
AATTCACGGAAGTTTTAAAGAAGCATAGTCACTATGATGTTGTCTATATT
ATTCATGTTTTACGCAAGAGTAAGGCATTTTGCTTTACAGCGTTTCCCAA
AGAACTTTTTTTCGGTAAAATAGAGTTTATGCTCGGTGTTGAAGGCATAT
CTGGATTTAAGCATTCTCAAGAGCGCAGCGAGTATCTCACAGAGATTCTT
GATGATGAAAGGATTGTACCAAAGCTCCAAGCAATCCAGAATGATTATGC
TGCTATAAAAGAGAAATTGATTGCAGAATCTCAGGAGAATGAGCGAGAAG
ATTTATCAAAGGTTCTGTTTTACATTAATCAAGATTTTCCTGAAGACGTT
TCTACAATGATTAACTCTTACAAGAGGAAGTATGATGATTCAATGACAAC
CTATCAATCAAACGACGAGGCAACTCAAAGACCTGTTTTAACACAACTTC
GAAAGATAAAAGAAACTACCACTGCTCCTACTACTACTATCATTACTGAC
AGTGATTCTCAAGCGGAAGATGAAACACGTGCATCCAAGATTTTTAAATT
GAAAGAAAAGCTATGGTCTTCCAACATTCAAGTTGACAAAAGTAAAGGCT
ATGAAATTAAAAAGGAGAAAAAAAAATTGTCAGCATTGGAGGAAAGTATT
GCAGAAAAAGAAAGAGAAAAGGAAGATAAGAGACATTATTACAAGAAAAG
TGCAATGTTACAAGTTAAATCAAAGGTTCCAGGATCAAAATCGAAAAGCA
AACATCCTTATATACGGTTTGAACTTCCCACTCAAGCAGATGTCTATGAA
CATTAGTTTTCAAGAAAGAATATTTTAATATTGGTATTTTTAACATTTGA
CAATTGCAAAATATAACCTGGTTTTTATGAACTAAAAGCATATTTAAATA
TCTTGGATTGATTATAAAAAAATTGTACTCTGTCTTAAATCTCTCATTTT
GGATCAAATACAGGACATCACATATTTTGTACATTCTACGGTATCATTAT
ATATACGATGAAAAGGATATGAGGCTGTCTATGTATATGGTGTTGTTTTT
TTATATTTCTTAAAAATCTAGTTGCTTGTATAAGTTTGTTGTTTGTGATG
TTGTAGTTGATGTTGTGTTGCTTCCAAGGATAAACCAATGGGCGCGGTAA
GCGTTTTTACGGCAGGGAACTACCACTGTCAATCTGGTGTGTTGTTTTTC
TGATGGTGTTTTTGCAACTGGTGTTCTTTCTTTGAAAATTCAATTTTTAT
AGAGATTTATGGGGGAGATGTCTGTTTCTGTTCAATTTAAGTTTTTATAA
AAATTTGTTTATATAATGTATTTATTTTTCAGAAAAATAAAAAAACCATC
AAAATGGTCTTAAGAAAACCAAAACGATAAAACAGATGTGGATTCGCTAT
CAAAAGATATCTTCAAAGATGGCTTCATTTGATCCAAGAGAATGTACCTT
TTTTTTCTGATAACTTATTTATATTCTGAGAATTATGGGTTACAGCCATA
CTTTAGGCGTACAAACTTTCGCGAGCAGAAACTTTCGCGATTTTCGCGAA
TTTTGGCCCTTTTCGCAAAAGTAAATGTCTTTTAAAATTCTAGGAAGGGC
CATTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTCGCGAAAAATATTTTTCTG
TTAAATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCTCGC
GAAAGTTTCTGCTTGCGAAAGTTTCTGCTCGCGAAAGTTGTACGCCTAAA
GTAGTCATCTTCAGTACTTCTCAAACTCGCAATAGTATTGTTGAGAGTTT
ATCTGAACAATTTGAGACAATCCAAGACAATCGTTATGCTCAAAATTTTT
ACTGTGTTTTTTAATATAGCAATAGAAGATAGGAAAAAAGAATCTTCCAT
TGTATTAAAATACCAAAATTATATTCAATTCAATTTACTCAATACAAAAT
CTAACGTGACCAATAGATTAAGTTTGAGTAATTTAATTACAAATATTTTC
AGTACTTTTAAAAATGATTCAAATAATTACTATGAAACTTTTTAACAAAG
TTACTTTTTCAGATTTTAATTTTTGTATAATTTTCATTTCTTATTTTAGT
AACCAAGAATAAAGAAGAAACAATCAAGTACCCTTTAAAGAGATTTGAGA
CAACATTAGGAAAATCATTGCGCATTGTGATTCTCACAAATTTAGACCGT
TTGAGAAAACATAGAAGTAATATTGAAAAGGTAGTTCAAATCAAAAATAA
TAAACCGACACAATAGAGAACACCATGGTTCAAACCCATTCTCATTCGGG
GTTATCTTGTTTGAATATATATTGAATACAGTAAAACTTATTAAAAAATT
TCTAAAAAATATTCATTTACAAGGCTTATACACGATGTTAACATCACAGT
TACGCAATTAAGCATTTTACCTTATTCTAATTTATCCTTTTTTAACTTTT
AGGCTAGAAATTACAAATATTAGTCCCATTAAAGCATTTATGATTATAAT
TTAATTGAACTATGAGTAATGCATTATGTTTTTCTGACAGTTTGCCAATG
AAAGAAGATGGAAAGATCTCAATATGGAACAAATAAATGCATCCAGGACT
GTACAGGTTTATACAGGCCTTTATTTTCACTTTTGTTTTTAGAATTGTTG
AAATAAGACTGTGTAGCTAAATCTTTGTTTGCAAGTTACATTTTAAATTT
CACTAGACTCAGAGGATGGGAGGTCATCCCATCTAAAAGCTACCATATGT
GCAAACAAGGGTCTCAAAATCAAACCTTTACAATGCAGAGAAAATCAAGT
CAAATTTGCGTAAGTTTCATAAAAAAATTGACCCTAATAGTGCATTATTT
TGAAACTTTCTAAGGCAAAAAATGGTCAGATTGTCAAAATTTTGCCCGAA
ATACCTTGTTCTTGTCAATTTTTCACACTTACAGGGAAGCCTGAAAAGCT
AGGTTGCGACCAGACTAGATTTTATCAAAGTTAATCTTTGCAAAGTGTTA
ACAAAACAAAACTAAAATGAATCCTAAATAGGCTGTTTTGTCCTTATTTC
TAGCAATTGAAAGCTACAATACGTGAATTAGACAAAGTAAAAGACCAATT
GGTCGAAACTGATGTTAATGCTTTCAAAAAGCGAATTGAACCAACAAGAA
ATGAAGCACTTGAGGCTATACAAGAATTCAGTCGGCTTTATGATGTTATT
TCAAGACAAGTCCAAGATTCTTTGCTGGAAGCTCAGAATGGTTAGTATTG
TTAAAATTTTAAGATATCTTTAAATTGCTTTTTTCCACAGGTTAAACCTG
GTTAAACAATACTATTTTCAAATTTTCAAATTCCTGATTTGTCACATTCT
ATCTAATTAATGAAAAGTTTTCAAAAGTTGATTTTTTGTGATCAAGTCAT
TTTCGTCGTGCAAAATGACAAATTCCATTGCATTGAGTATTCTCTCTTTC
TAATAACTTTTCAAAGCTGAAGGTGATCTCGTTGAAGTGCCATTACAATC
ACCACCAACATCACGAGGAAATTCACCACAGATCAACACATTTGAAGAAG
GATCTCTTATGGGAAATATACAAATAAGAGATAACCAAAGGGAACATGAA
GAAATTGCTGTTTGCCAATCATGGGATCATTTGAGAGATGTAGGTCTCCC
TTCCCTGATTACCCTTTTGCAATGCCTACAGTAATGGAATATAACTTAAT
CCACAAGTGGATCTCCTCAAATTGTTTAAGAAATCGGTATTTCAAGGATC
CTTTTTTCTGTGATTTAAAGAAAAAGTGAAATGTATATTTATCAATTTTA
TTAATTTTATCTTGCAGGGATTGGTTGAACTTAACTTACTTGTCAAGGAT
TTTGCTGTTGTTGTCCATGTAAGAATATGTCAATCTCACTGTAAATAAAT
ATAAAAAAGTGCTCGCCTACTGTAAAATAAATTTCTGTATAGAAAAAATC
ATGGTGAAAAAAAAATTAACTGAAGTTTTTTTCACCATGTAATATGAAAA
TCTCACGACAGTAAAAGTATACGATGATTTGTTCATTTGAAAGTATCGAA
ATCTGTGGAATAATCCAGGATAAAATCATACTTTTGTGCAGTGAGAAGTG
ATAAATTATTTTATTTATTCAATTGTAGAATCAACAAGAAATGGTGGATA
ATATTGAAGATAATATTGAAAAAGCCCATGAAAATGTTCGAGAGGGAACT
GGGTTTTTGGCACAGGTTTGGATTTTTTAGTTTTATCTCAAAGAAAAGCC
ACTTTATTATAACATTTCCTAAATTCTACTCCCTTTTTTTAGGCTAATCC
TGTATTATCTAGTAAACCCAAATTAAATGTACATACAAAAAGTATTAGTT
TAAGTTAAAATTAACATAATTAGGTCTTATGAAAATATGAAATTTTAACT
TGATCGATTGGCTGCAATAATTGATAATCTGATGATTATATTTTCAGGCC
AGTAAATATAAAGCCGCTGCAATCCCAGTTGGTGGTGCCATTGTTGGTGG
AATCATAGGTGGACCCATCGGTTTAATGGCGGGTTTTAAACTAGCCGGTG
TGGCTGCAGCTGTTGGTGGAGGGATAGCTGGATACACAGGTGGAAAATAT
TTGAAAAACAAACACGATGCCAGAGTTGAAATGGAAATGAGTAATTTGAG
TAAGAAAGATGACGATTTTCAAAGAAGGTGATATTCATGTCATTACAATA
TTTTCCGGGATTATTTTGATTTGTGGTGAGTGATTAAGTCATGAATTGAT
AGAATGTAATTTTATCACATGGAATGTTATCTTGGAACATATTTTGGAAA
TTTTTTAAATATTTAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039899XLOC_039899Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063656-exon-scaffold_397-1575043694:144208..146350TCONS_00063656-exon-scaffold_397-1575043694:144208..146350Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1575043694:143271..143401TCONS_00063656-exon-scaffold_397-1575043694:143271..143401Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1575043694:142261..142960TCONS_00063656-exon-scaffold_397-1575043694:142261..142960Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1575043694:141862..142034TCONS_00063656-exon-scaffold_397-1575043694:141862..142034Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1575043694:141633..141683TCONS_00063656-exon-scaffold_397-1575043694:141633..141683Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1575043694:141286..141372TCONS_00063656-exon-scaffold_397-1575043694:141286..141372Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1575043694:140684..141053TCONS_00063656-exon-scaffold_397-1575043694:140684..141053Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1510915933:144208..146350TCONS_00063656-exon-scaffold_397-1510915933:144208..146350Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1510915933:143271..143401TCONS_00063656-exon-scaffold_397-1510915933:143271..143401Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1510915933:142261..142960TCONS_00063656-exon-scaffold_397-1510915933:142261..142960Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1510915933:141862..142034TCONS_00063656-exon-scaffold_397-1510915933:141862..142034Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1510915933:141633..141683TCONS_00063656-exon-scaffold_397-1510915933:141633..141683Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1510915933:141286..141372TCONS_00063656-exon-scaffold_397-1510915933:141286..141372Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1510915933:140684..141053TCONS_00063656-exon-scaffold_397-1510915933:140684..141053Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1491911889:144208..146350TCONS_00063656-exon-scaffold_397-1491911889:144208..146350Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1491911889:143271..143401TCONS_00063656-exon-scaffold_397-1491911889:143271..143401Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1491911889:142261..142960TCONS_00063656-exon-scaffold_397-1491911889:142261..142960Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1491911889:141862..142034TCONS_00063656-exon-scaffold_397-1491911889:141862..142034Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1491911889:141633..141683TCONS_00063656-exon-scaffold_397-1491911889:141633..141683Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1491911889:141286..141372TCONS_00063656-exon-scaffold_397-1491911889:141286..141372Clytia hemisphaericaexon
TCONS_00063656-exon-scaffold_397-1491911889:140684..141053TCONS_00063656-exon-scaffold_397-1491911889:140684..141053Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_397supercontigscaffold_397:140684..146350 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.473769	0.137989	0.213624	0.329429	0.590039	0.277431	0.334031	0.535994	0.621478	0.250033	0.817546	0.657783	0.844975	1.12108	0.596452	0.882199	0.92554	0.51301	0.857744	0.555299	1.16648	2.1673	0.866025	0.686627	0.137819	0.360573	1.64118	1.30703	0.307719	0.307203
Blast
[Close]
BLAST of TCONS_00063656 vs. Swiss-Prot (Human)
Match: SNPC1 (snRNA-activating protein complex subunit 1 OS=Homo sapiens GN=SNAPC1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.031e-20
Identity = 71/261 (27.20%), Postives = 115/261 (44.06%), Query Frame = 1 
Query:  385 ALKHDVNKLFSKFHEKQSVRFDDFCEEWKKLNFSALFGATYRNTPGSKMRIAERLFRIASEFLSEDSTFLYRVAAIYTFYAVYFKQVTPVKTKIRMTPAMWTDLMQFTEVLKKHSHYDVVYIIHVLRKSKAFCFTAFPKELFFGKIEFMLGVEGISGFKHSQERSEYLTEILDDERIVPKLQAIQNDYAAIKEKLIAESQENEREDLSKVLFYINQDFPEDVSTMI------------NSYKRKYDDSMTTYQSNDEATQR 1131
             L+ D   L S+F E  SVRF+DF E W+ + F  +F    RN    K    +    +A  +     TF  RV A+Y  Y +Y  Q+   K KIR+    W ++++F + L    H+D  YI   LR  +AF FTA PK L +   + +   E    FK   +R   L  I  D  ++ ++  + + Y  +K  +  +  + +     K L  I  DF +++  ++             S K K +D     + N + T+R
Sbjct:    6 GLQTDCEALLSRFQETDSVRFEDFTELWRNMKFGTIFCGRMRNL--EKNMFTKEALALAWRYFLPPYTFQIRVGALYLLYGLYNTQLCQPKQKIRVALKDWDEVLKFQQDLVNAQHFDAAYIFRKLRLDRAFHFTAMPKLLSYRMKKKIHRAEVTEEFKDPSDRVMKL--ITSD--VLEEMLNVHDHYQNMKHVISVDKSKPD-----KALSLIKDDFFDNIKNIVLEHQQWHKDRKNPSLKSKTNDGEEKMEGNSQETER 255
The following BLAST results are available for this feature:
BLAST of TCONS_00063656 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNPC11.031e-2027.20snRNA-activating protein complex subunit 1 OS=Homo... [more]
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