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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063542 ID=TCONS_00063542|Name=TCONS_00063542|organism=Clytia hemisphaerica|type=transcript|length=1381bp
GGTGGTGGTCGCCGCAATTGTATAATCTGAGGTCAGAGGATTCGAGAAGA
GCTGTTTCAACAGAGAAAGTTTACGTTTTTCCAACAATTTCGAGATGTCA
GGGATGTTATATACACGGTGGAGGTGGTTTCGACTATTCTTTGAGACGTT
GAAGAGTGATTTAAGACAAGTTCTGGCGGAGATGTCCAGTTGgttcaatt
catttttatttaatgtACACAGTTCAAGTCCATACAAAAGCTTAGGAATC
AAAATGGAGCTGAACAGAGTAACAATTGAATTAGGGTGACAATGACGTAT
GCCTGCTGTTATGAGTGAGGTTGCTGCTGCCCAGAGTTCAGATACACGAC
TATCTTTGTGTTCAGGTGTTTATTAAGGCTGATAAATCCCCTTTTGACGC
TCCAGGAGAAACCAAGGTGGATTAGCTCGTTTTGTGGAAGCACAGGTATA
CCGTTGAGGGTCAAGCTAGGATTATCGATAGGACAACTGCCTGAAATGAC
GAATTGAGTTTTTGATTTGGATAAGGTGTGACAAAATTTAATCCCGTTCT
TTTGGCCAAACAACTCACATATCCTGATCATACGTTGGAGTTGTGATAGA
CACGGACTTAGGAGAATATTCctaaggtggactcactcacaaagataaaa
aacagcgcttttctttataattaaAATACGCCTTTCACCgccttttgaaa
cttgctgctgtttttataaatttttatcatgttttctggtcttttgtaga
gtatttaaagaggtttattattcgtttactactaagtattttatgtttgt
gtagttagtgaatgcaccaataaattgataatgctcagtaaatagtacaa
aaagagttaatctTCCGCAACAACTCATAGCcctcttcttcaccaaaact
acaaacagcacagccacaggtatgatcttttacttttatctgatgaagtt
tgattggtNcctcatttttctcacagaggtaaggactttcaaataaaatt
agtttggttttcaaaatttgaggggaaaattttggcctgaccaCCCTACC
GATTGTCGTATATCAtatcgaaccatcaaatttcatcgaacaAAATCAAA
TGGTTAggtgtttgattaccgaacctgatcgaagagtaatcgaactttac
caGAAAATCTTCAGTATTGATTAAAGTTATATCGCAGTTTAATCaagttc
aatcaatgtttttgtagGTCAAATGGTTCCAGTTATTGACCTTACCGGAA
TTTCTtggttcgatgactgttcgatttggttcggtaatcaaacagttCAA
TTGACATCGCCCGGCTGATGGGTTGATAGATATTTGCCTGCTCTATAAGC
TTTTTAgtgtgggcgtctgctaataagccgt Run BLAST on NCBI transcript from alignment at scaffold_392:31722..33102 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063542 ID=TCONS_00063542|Name=TCONS_00063542|organism=Clytia hemisphaerica|type=transcript|length=1381bp|location=Sequence derived from alignment at scaffold_392:31722..33102 (Clytia hemisphaerica)
acggcttattagcagacgcccacacTAAAAAGCTTATAGAGCAGGCAAAT
ATCTATCAACCCATCAGCCGGGCGATGTCAATTGaactgtttgattaccg
aaccaaatcgaacagtcatcgaaccaAGAAATTCCGGTAAGGTCAATAAC
TGGAACCATTTGACctacaaaaacattgattgaacttGATTAAACTGCGA
TATAACTTTAATCAATACTGAAGATTTTCtggtaaagttcgattactctt
cgatcaggttcggtaatcaaacaccTAACCATTTGATTTtgttcgatgaa
atttgatggttcgataTGATATACGACAATCGGTAGGGtggtcaggccaa
aattttcccctcaaattttgaaaaccaaactaattttatttgaaagtcct
tacctctgtgagaaaaatgaggNaccaatcaaacttcatcagataaaagt
aaaagatcatacctgtggctgtgctgtttgtagttttggtgaagaagagg
GCTATGAGTTGTTGCGGAagattaactctttttgtactatttactgagca
ttatcaatttattggtgcattcactaactacacaaacataaaatacttag
tagtaaacgaataataaacctctttaaatactctacaaaagaccagaaaa
catgataaaaatttataaaaacagcagcaagtttcaaaaggcGGTGAAAG
GCGTATTttaattataaagaaaagcgctgttttttatctttgtgagtgag
tccaccttagGAATATTCTCCTAAGTCCGTGTCTATCACAACTCCAACGT
ATGATCAGGATATGTGAGTTGTTTGGCCAAAAGAACGGGATTAAATTTTG
TCACACCTTATCCAAATCAAAAACTCAATTCGTCATTTCAGGCAGTTGTC
CTATCGATAATCCTAGCTTGACCCTCAACGGTATACCTGTGCTTCCACAA
AACGAGCTAATCCACCTTGGTTTCTCCTGGAGCGTCAAAAGGGGATTTAT
CAGCCTTAATAAACACCTGAACACAAAGATAGTCGTGTATCTGAACTCTG
GGCAGCAGCAACCTCACTCATAACAGCAGGCATACGTCATTGTCACCCTA
ATTCAATTGTTACTCTGTTCAGCTCCATTTTGATTCCTAAGCTTTTGTAT
GGACTTGAACTGTGTacattaaataaaaatgaattgaacCAACTGGACAT
CTCCGCCAGAACTTGTCTTAAATCACTCTTCAACGTCTCAAAGAATAGTC
GAAACCACCTCCACCGTGTATATAACATCCCTGACATCTCGAAATTGTTG
GAAAAACGTAAACTTTCTCTGTTGAAACAGCTCTTCTCGAATCCTCTGAC
CTCAGATTATACAATTGCGGCGACCACCACC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063542-exon-scaffold_392-1491911889:31722..33102 | TCONS_00063542-exon-scaffold_392-1491911889:31722..33102 | Clytia hemisphaerica | exon |
| TCONS_00063542-exon-scaffold_392-1510915933:31722..33102 | TCONS_00063542-exon-scaffold_392-1510915933:31722..33102 | Clytia hemisphaerica | exon |
| TCONS_00063542-exon-scaffold_392-1575043694:31722..33102 | TCONS_00063542-exon-scaffold_392-1575043694:31722..33102 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_392 | supercontig | scaffold_392:31722..33102 . |
Blast
The following BLAST results are available for this feature:
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