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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063421 ID=TCONS_00063421|Name=TCONS_00063421|organism=Clytia hemisphaerica|type=transcript|length=1139bp
AATTGGTTCAATACGCGCTAAACTTTGGAGTCAGATTTATCGAAAGTTTC
GAAAGGGTGATCCTTGTAATGGAGAGACTAGTCACGATGAAGGAGATAGT
GATGTTGAGCGACCTTTGGTTAACGAAGATACTCCTGAATCGGACGAAGA
AACTACCGAATGTGATAGCTTTGAGATGGAGATTTGCAACAGAATGGCTG
ATATTATTCGTTTGGAGCAACGACATGCTAAGTTTCATAAACATTTGAGT
AGACCATCAAAAATTGGAGCAGCTGCAATATGTAGTGGTATTACTGGATT
AGTAAACGAACAACTTTTTAGAGACATACAACTTCACATTATATCACCAA
ATAATCTGCGTGGCATATTCTTTCGTGAAAATAGGGACATTTTCACCATC
AAAGCTGGAATGTTTGGTATTAAGCCAATCATTGTGAAAGGAATTTCTGA
CTCTTCAATTATTGAGCAGAAAAATCATTCTATAGTGTTGGCTCACGAAT
TTAGAATTCTCCAATTTCTTGGTCCCCATCGTCACCTTATCGATTATTAT
GGCTTAGTCGAACTCAATGGGATTCCTCAGATAGTCTTGGATGATGATTT
TAAATTTGCTGGTTTTGAGAGGTTCTACCAAGAAAACCGTCGCTTTGATA
TCTACACCATTCAGGCATTGTTTAGAGACATAACATCTGTTGTTGAATTC
CTCCATGTGAAGGGTGTTATTCACATGAATATAAcagaagattcttttgt
gttcagTCTCGATGTTTCTGGTCCAGAGTGGAGGTATTTCCCCATCCTTT
GTGATTTCTCCTGTTGTTGTCTGGTCTCTGATGTGAAAGTACTGACGCCA
CAATTGCAGAGCAGATTTCGATCAACAAAACATCTTCCCGTAGAAGTGAT
GCGTGGAGAAAAATTGCCATCTTTCAATTGTGACATTTATGCTGTAGCTG
TTTTGATGTCACATTTTTCAAACCGTTTGAACACTCCTCAAGAAcaacat
atttttgatgaaGTTACTATCAAGCTTTTAAGAAATACTACAGATATTTT
TATTGATTCATTGTatgatttcattaaaaactaaagtatttgaaactttt
tcttcTTTGCTTGTTTGACTTTCCCTAATTCCCATATAG Run BLAST on NCBI protein sequence of TCONS_00063421-protein >TCONS_00063421-protein ID=TCONS_00063421-protein|Name=TCONS_00063421-protein|organism=Clytia hemisphaerica|type=polypeptide|length=360bp
IGSIRAKLWSQIYRKFRKGDPCNGETSHDEGDSDVERPLVNEDTPESDEE
TTECDSFEMEICNRMADIIRLEQRHAKFHKHLSRPSKIGAAAICSGITGL
VNEQLFRDIQLHIISPNNLRGIFFRENRDIFTIKAGMFGIKPIIVKGISD
SSIIEQKNHSIVLAHEFRILQFLGPHRHLIDYYGLVELNGIPQIVLDDDF
KFAGFERFYQENRRFDIYTIQALFRDITSVVEFLHVKGVIHMNITEDSFV
FSLDVSGPEWRYFPILCDFSCCCLVSDVKVLTPQLQSRFRSTKHLPVEVM
RGEKLPSFNCDIYAVAVLMSHFSNRLNTPQEQHIFDEVTIKLLRNTTDIF
IDSLYDFIKN Run BLAST on NCBI transcript from alignment at scaffold_389:66085..67692+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063421 ID=TCONS_00063421|Name=TCONS_00063421|organism=Clytia hemisphaerica|type=transcript|length=1608bp|location=Sequence derived from alignment at scaffold_389:66085..67692+ (Clytia hemisphaerica)
AATTGGTTCAATACGCGCTAAACTTTGGAGTCAGATTTATCGAAAGTTTC
GAAAGGGTGATCCTTGTAATGGAGAGACTAGTCACGATGAAGGAGATAGT
GATGTTGAGCGACCTTTGGTATGTACTGAAAACAATTATGCATCTCAAAC
TCATTATCTCAATTATTAGGGGGTTGGGTATACAGGGTGGGTTTCAAAAT
TGTTcgtcgaaaaaatttttttttctattcgctctttgaaaaaagatctC
ACAGGCTAATTAGGATACTTAAGATACCATTCCTGCCAAAAATATATCTT
GGGgctcataaattttgaaaatcgactaaccACCCAATTAAACACCCACT
GATAATAGCTTTTTTGCCCTTTTTGGCCAGCAGCCAAATTTAGTCGAAAT
CAATACATTTAAGGCATCAACTTGTAATATTGGGCCATTTCACTTTGTAT
CCATACAGGTGGGGGTAGACAAATAGTTCTAGAGGGTAATCTCCAGGGTT
TGTATATTTTCATATACGTCCCTGTGTGGTTTTTAAAAGGAACAGCCAAT
TTTGATCAATGTTAATGTACTTTTCTTATCTAATCAGGTTAACGAAGATA
CTCCTGAATCGGACGAAGAAACTACCGAATGTGATAGCTTTGAGATGGAG
ATTTGCAACAGAATGGCTGATATTATTCGTTTGGAGCAACGACATGCTAA
GTTTCATAAACATTTGAGTAGACCATCAAAAATTGGAGCAGCTGCAATAT
GTAGTGGTATTACTGGATTAGTAAACGAACAACTTTTTAGAGACATACAA
CTTCACATTATATCACCAAATAATCTGCGTGGCATATTCTTTCGTGAAAA
TAGGGACATTTTCACCATCAAAGCTGGAATGTTTGGTATTAAGCCAATCA
TTGTGAAAGGAATTTCTGACTCTTCAATTATTGAGCAGAAAAATCATTCT
ATAGTGTTGGCTCACGAATTTAGAATTCTCCAATTTCTTGGTCCCCATCG
TCACCTTATCGATTATTATGGCTTAGTCGAACTCAATGGGATTCCTCAGA
TAGTCTTGGATGATGATTTTAAATTTGCTGGTTTTGAGAGGTTCTACCAA
GAAAACCGTCGCTTTGATATCTACACCATTCAGGCATTGTTTAGAGACAT
AACATCTGTTGTTGAATTCCTCCATGTGAAGGGTGTTATTCACATGAATA
TAAcagaagattcttttgtgttcagTCTCGATGTTTCTGGTCCAGAGTGG
AGGTATTTCCCCATCCTTTGTGATTTCTCCTGTTGTTGTCTGGTCTCTGA
TGTGAAAGTACTGACGCCACAATTGCAGAGCAGATTTCGATCAACAAAAC
ATCTTCCCGTAGAAGTGATGCGTGGAGAAAAATTGCCATCTTTCAATTGT
GACATTTATGCTGTAGCTGTTTTGATGTCACATTTTTCAAACCGTTTGAA
CACTCCTCAAGAAcaacatatttttgatgaaGTTACTATCAAGCTTTTAA
GAAATACTACAGATATTTTTATTGATTCATTGTatgatttcattaaaaac
taaagtatttgaaactttttcttcTTTGCTTGTTTGACTTTCCCTAATTC
CCATATAG Coding sequence (CDS) from alignment at scaffold_389:66085..67692+ >TCONS_00063421 ID=TCONS_00063421|Name=TCONS_00063421|organism=Clytia hemisphaerica|type=CDS|length=2166bp|location=Sequence derived from alignment at scaffold_389:66085..67692+ (Clytia hemisphaerica)
ATTGGTTCAATACGCGCTAAACTTTGGAGTCAGATTTATCGAAAGTTTCG
AAAGGGTGATCCTTGTAATGGAGAGACTAGTCACGATGAAGGAGATAGTG
ATGTTGAGCGACCTTTGGTTAACGAAGATACTCCTGAATCGGACGAAGAA
ACTACCGAATGTGATAGCTTTGAGATGGAGATTTGCAACAGAATGGCTGA
TATTATTCGTTTGGAGCAACGACATGCTAAGTTTCATAAACATTTGAGTA
GACCATCAAAAATTGGAGCAGCTGCAATATGTAGTGGTATTACTGGATTA
GTAAACGAACAACTTTTTAGAGACATACAACTTCACATTATATCACCAAA
TAATCTGCGTGGCATATTCTTTCGTGAAAATAGGGACATTTTCACCATCA
AAGCTGGAATGTTTGGTATTAAGCCAATCATTGTGAAAGGAATTTCTGAC
TCTTCAATTATTGAGCAGAAAAATCATTCTATAGTGTTGGCTCACGAATT
TAGAATTCTCCAATTTCTTGGTCCCCATCGTCACCTTATCGATTATTATG
GCTTAGTCGAACTCAATGGGATTCCTCAGATAGTCTTGGATGATGATTTT
AAATTTGCTGGTTTTGAGAGGTTCTACCAAGAAAACCGTCGCTTTGATAT
CTACACCATTCAGGCATTGTTTAGAGACATAACATCTGTTGTTGAATTCC
TCCATGTGAAGGGTGTTATTCACATGAATATAAcagaagattcttttgtg
ttcagTCTCGATGTTTCTGGTCCAGAGTGGAGGTATTTCCCCATCCTTTG
TGATTTCTCCTGTTGTTGTCTGGTCTCTGATGTGAAAGTACTGACGCCAC
AATTGCAGAGCAGATTTCGATCAACAAAACATCTTCCCGTAGAAGTGATG
CGTGGAGAAAAATTGCCATCTTTCAATTGTGACATTTATGCTGTAGCTGT
TTTGATGTCACATTTTTCAAACCGTTTGAACACTCCTCAAGAAcaacata
tttttgatgaaGTTACTATCAAGCTTTTAAGAAATACTACAGATATTTTT
ATTGATTCATTGTatgatttcattaaaaactaaATTGGTTCAATACGCGC
TAAACTTTGGAGTCAGATTTATCGAAAGTTTCGAAAGGGTGATCCTTGTA
ATGGAGAGACTAGTCACGATGAAGGAGATAGTGATGTTGAGCGACCTTTG
GTTAACGAAGATACTCCTGAATCGGACGAAGAAACTACCGAATGTGATAG
CTTTGAGATGGAGATTTGCAACAGAATGGCTGATATTATTCGTTTGGAGC
AACGACATGCTAAGTTTCATAAACATTTGAGTAGACCATCAAAAATTGGA
GCAGCTGCAATATGTAGTGGTATTACTGGATTAGTAAACGAACAACTTTT
TAGAGACATACAACTTCACATTATATCACCAAATAATCTGCGTGGCATAT
TCTTTCGTGAAAATAGGGACATTTTCACCATCAAAGCTGGAATGTTTGGT
ATTAAGCCAATCATTGTGAAAGGAATTTCTGACTCTTCAATTATTGAGCA
GAAAAATCATTCTATAGTGTTGGCTCACGAATTTAGAATTCTCCAATTTC
TTGGTCCCCATCGTCACCTTATCGATTATTATGGCTTAGTCGAACTCAAT
GGGATTCCTCAGATAGTCTTGGATGATGATTTTAAATTTGCTGGTTTTGA
GAGGTTCTACCAAGAAAACCGTCGCTTTGATATCTACACCATTCAGGCAT
TGTTTAGAGACATAACATCTGTTGTTGAATTCCTCCATGTGAAGGGTGTT
ATTCACATGAATATAAcagaagattcttttgtgttcagTCTCGATGTTTC
TGGTCCAGAGTGGAGGTATTTCCCCATCCTTTGTGATTTCTCCTGTTGTT
GTCTGGTCTCTGATGTGAAAGTACTGACGCCACAATTGCAGAGCAGATTT
CGATCAACAAAACATCTTCCCGTAGAAGTGATGCGTGGAGAAAAATTGCC
ATCTTTCAATTGTGACATTTATGCTGTAGCTGTTTTGATGTCACATTTTT
CAAACCGTTTGAACACTCCTCAAGAAcaacatatttttgatgaaGTTACT
ATCAAGCTTTTAAGAAATACTACAGATATTTTTATTGATTCATTGTatga
tttcattaaaaactaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063421-exon-scaffold_389-1491911889:66085..66202 | TCONS_00063421-exon-scaffold_389-1491911889:66085..66202 | Clytia hemisphaerica | exon |
| TCONS_00063421-exon-scaffold_389-1510915933:66085..66202 | TCONS_00063421-exon-scaffold_389-1510915933:66085..66202 | Clytia hemisphaerica | exon |
| TCONS_00063421-exon-scaffold_389-1575043694:66085..66202 | TCONS_00063421-exon-scaffold_389-1575043694:66085..66202 | Clytia hemisphaerica | exon |
| TCONS_00063421-exon-scaffold_389-1491911889:66672..67692 | TCONS_00063421-exon-scaffold_389-1491911889:66672..67692 | Clytia hemisphaerica | exon |
| TCONS_00063421-exon-scaffold_389-1510915933:66672..67692 | TCONS_00063421-exon-scaffold_389-1510915933:66672..67692 | Clytia hemisphaerica | exon |
| TCONS_00063421-exon-scaffold_389-1575043694:66672..67692 | TCONS_00063421-exon-scaffold_389-1575043694:66672..67692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_389 | supercontig | scaffold_389:66085..67692 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
The following BLAST results are available for this feature:
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