TCONS_00063402 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063402
Unique NameTCONS_00063402
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length156

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063402 ID=TCONS_00063402|Name=TCONS_00063402|organism=Clytia hemisphaerica|type=transcript|length=156bp
gttgcattcaattttcaaaaaaaaaatttgataaatttgtttgttataGG
CTTAACCattgctgtaccaaatttcatgaccaaaTAATGTTCCTATCCTA
AGTTATCAACGGGGGGCACTATGTGCCCCCCCCTTTCAGTTCTAAGGGAC
CCAAAT
Run BLAST on NCBI

transcript from alignment at scaffold_388:64005..64160

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063402 ID=TCONS_00063402|Name=TCONS_00063402|organism=Clytia hemisphaerica|type=transcript|length=156bp|location=Sequence derived from alignment at scaffold_388:64005..64160 (Clytia hemisphaerica)
ATTTGGGTCCCTTAGAACTGAAAGGGGGGGGCACATAGTGCCCCCCGTTG
ATAACTTAGGATAGGAACATTAtttggtcatgaaatttggtacagcaatG
GTTAAGCCtataacaaacaaatttatcaaattttttttttgaaaattgaa
tgcaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039733XLOC_039733Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063402-exon-scaffold_388-1491911889:64005..64160TCONS_00063402-exon-scaffold_388-1491911889:64005..64160Clytia hemisphaericaexon
TCONS_00063402-exon-scaffold_388-1510915933:64005..64160TCONS_00063402-exon-scaffold_388-1510915933:64005..64160Clytia hemisphaericaexon
TCONS_00063402-exon-scaffold_388-1575043694:64005..64160TCONS_00063402-exon-scaffold_388-1575043694:64005..64160Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_388supercontigscaffold_388:64005..64160 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063402 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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