TCONS_00063401 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063401
Unique NameTCONS_00063401
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length141

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063401 ID=TCONS_00063401|Name=TCONS_00063401|organism=Clytia hemisphaerica|type=transcript|length=141bp
gaacaaCACTGGAGGTAGAAATCAAAGACCGTCGTATGTTTTTGGGGGAG
AAGAAGGTGACAAATTGGACAAATTATTGGGGCTGTTTGTTTTAATGGCA
CGGTAGAAGGCTCCACTTTATATGATGAATCCAAAAAAAAG
Run BLAST on NCBI

transcript from alignment at scaffold_388:61832..61972

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063401 ID=TCONS_00063401|Name=TCONS_00063401|organism=Clytia hemisphaerica|type=transcript|length=141bp|location=Sequence derived from alignment at scaffold_388:61832..61972 (Clytia hemisphaerica)
CTTTTTTTTGGATTCATCATATAAAGTGGAGCCTTCTACCGTGCCATTAA
AACAAACAGCCCCAATAATTTGTCCAATTTGTCACCTTCTTCTCCCCCAA
AAACATACGACGGTCTTTGATTTCTACCTCCAGTGttgttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039732XLOC_039732Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063401-exon-scaffold_388-1491911889:61832..61972TCONS_00063401-exon-scaffold_388-1491911889:61832..61972Clytia hemisphaericaexon
TCONS_00063401-exon-scaffold_388-1510915933:61832..61972TCONS_00063401-exon-scaffold_388-1510915933:61832..61972Clytia hemisphaericaexon
TCONS_00063401-exon-scaffold_388-1575043694:61832..61972TCONS_00063401-exon-scaffold_388-1575043694:61832..61972Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_388supercontigscaffold_388:61832..61972 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063401 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top