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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063394 ID=TCONS_00063394|Name=TCONS_00063394|organism=Clytia hemisphaerica|type=transcript|length=935bp
TCTTGGACGTGACCAATCTTTACATAATCTTCTAACTTCGAACTGTAGAT
TTGTTTGATTTCAGGTAATTTCTCTAATCTTCGCTCAGTAGACAGAAGTC
TGGAGACCGCAAGTGGTCGATTATTCACGAGCTCCAAATCGTCACTTTTC
CACAACATGCCCACTTCAAAATGATTGTCCACTAGTCTTGTGTTGTTCTT
TAGAAGATGTAAGGCTCTCTTCTCATCCCGAGTAAGCAAGGCTTCTGAAT
CAGGCGTTGTCGCATAGGTTTCTTGACTCCAGAATCTTTCCAGCTTCGAG
TCAAGGGATTGAACTGATATGTAATTAGAGCAACCATCATTGCTACCAGA
CTTCCCTCCGAAGATAGTCCATCCTAGCAAAGTCCTCACAGCAATTGGTT
CTTTTGAGTTTTCACCTTTAATAAATTCGAGATGCAAGAGCACTTCTCCT
TCTGGTACGTCTTGAATCTTATTAGCACATCCCTTCAATGATTACTGAAG
GATGTGCTAATAAGATTCAAGACGTACCAGAAGGAGAAGTGCTCAAATCG
CTAACATCGGATGAAAGAGCAGCTGTCACAAAAGCTGTTTNGCGCTTCTG
GTACGTCTGCACCGATTAGGATCTCAACGTCTTTATCGAGTGGTTGTGGT
AAGGAAGCATCTCTGAGATGTTGgtattgttttttcattttcgaaaCGTT
GTAGGGTTTCATCTTGATGTTTAGAGACTCGACTACCCAAGCGTCCTCTA
CATGAACGCTGGAATCACATGATGAAAGAAGAAAGTTGACTGATCTTGAT
CTCAGGGTTTGCCTTTTTGTTAGAACGTTGCTGATAGAAACTTTCAGATT
ACTGTTGATATTTGGTAATTTCAATCGATCAACAAGGCTGGCACTGATTA
ACGTGGTATCAGAACCAGGATCTAGAAGAACATTN Run BLAST on NCBI transcript from alignment at scaffold_388:103861..104921- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063394 ID=TCONS_00063394|Name=TCONS_00063394|organism=Clytia hemisphaerica|type=transcript|length=1061bp|location=Sequence derived from alignment at scaffold_388:103861..104921- (Clytia hemisphaerica)
TCTTGGACGTGACCAATCTTTACATAATCTTCTAACTTCGAACTGTAGAT
TTGTTTGATTTCAGGTAATTTCTCTAATCTTCGCTCAGTAGACAGAAGTC
TGGAGACCGCAAGTGGTCGATTATTCACGAGCTCCAAATCGTCACTTTTC
CACAACATGCCCACTTCAAAATGATTGTCCACTAGTCTTGTGTTGTTCTT
TAGAAGATGTAAGGCTCTCTTCTCATCCCGAGTAAGCAAGGCTTCTGAAT
CAGGCGTTGTCGCATAGGTTTNTTTCCACAACATGCCCACTTCAAAATGA
TTGTTCACGAGTCTTGTGTTGTTCTTTAGAAGATGTAAGGCTCTCTTCTC
ATCCCGAGTAAGCAAAGCTTCTGAATCAGGCGTTGTCGCATAGGTTTCTT
GACTCCAGAATCTTTCCAGCTTCGAGTCAAGGGATTGAACTGATATGTAA
TTAGAGCAACCATCATTGCTACCAGACTTCCCTCCGAAGATAGTCCATCC
TAGCAAAGTCCTCACAGCAATTGGTTCTTTTGAGTTTTCACCTTTAATAA
ATTCGAGATGCAAGAGCACTTCTCCTTCTGGTACGTCTTGAATCTTATTA
GCACATCCCTTCAATGATTACTGAAGGATGTGCTAATAAGATTCAAGACG
TACCAGAAGGAGAAGTGCTCAAATCGCTAACATCGGATGAAAGAGCAGCT
GTCACAAAAGCTGTTTNGCGCTTCTGGTACGTCTGCACCGATTAGGATCT
CAACGTCTTTATCGAGTGGTTGTGGTAAGGAAGCATCTCTGAGATGTTGG
TATTGTTTTTTCATTTTCGAAACGTTGTAGGGTTTCATCTTGATGTTTAG
AGACTCGACTACCCAAGCGTCCTCTACATGAACGCTGGAATCACATGATG
AAAGAAGAAAGTTGACTGATCTTGATCTCAGGGTTTGCCTTTTTGTTAGA
ACGTTGCTGATAGAAACTTTCAGATTACTGTTGATATTTGGTAATTTCAA
TCGATCAACAAGGCTGGCACTGATTAACGTGGTATCAGAACCAGGATCTA
GAAGAACATTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063394-exon-scaffold_388-1575043694:104655..104921 | TCONS_00063394-exon-scaffold_388-1575043694:104655..104921 | Clytia hemisphaerica | exon |
| TCONS_00063394-exon-scaffold_388-1575043694:103861..104528 | TCONS_00063394-exon-scaffold_388-1575043694:103861..104528 | Clytia hemisphaerica | exon |
| TCONS_00063394-exon-scaffold_388-1510915933:104655..104921 | TCONS_00063394-exon-scaffold_388-1510915933:104655..104921 | Clytia hemisphaerica | exon |
| TCONS_00063394-exon-scaffold_388-1510915933:103861..104528 | TCONS_00063394-exon-scaffold_388-1510915933:103861..104528 | Clytia hemisphaerica | exon |
| TCONS_00063394-exon-scaffold_388-1491911889:104655..104921 | TCONS_00063394-exon-scaffold_388-1491911889:104655..104921 | Clytia hemisphaerica | exon |
| TCONS_00063394-exon-scaffold_388-1491911889:103861..104528 | TCONS_00063394-exon-scaffold_388-1491911889:103861..104528 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_388 | supercontig | scaffold_388:103861..104921 - |
Blast
The following BLAST results are available for this feature:
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