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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063384 ID=TCONS_00063384|Name=TCONS_00063384|organism=Clytia hemisphaerica|type=transcript|length=1489bp
AATATATACAACTTTTAACAGAAATATGTAAAAATCGTAACCTGTAGATA
ACCTGTTGTCTAAATAATATTCTACTTCAAATAATATAGCCTACCctaaa
aacctaaatttaatttaattgctGTAGTAAATTTTTAACTACAGGATATT
TTAAGATTATTCATATTATCCAGATACCCGGgaggggggcactgggtttt
gAAATCTTTACAGAGCTCTCAAAATAAGACATCACAATAAACATATCAGA
GGTATTAGAAAATACCTGTTATCTCTTGTTCTGTGCCAAATGCCACCACT
TCCACCTCCACCTCCTTCCTCTTCCAAGTCACCTTTATCATATCGCCGAC
GACAGCCCCTTGATAATAGGATGCCCAATCTGACTTGTAGTTGTTTTCGC
CTTGAAACTTATAACAAAGCACTTGATCACTcattttgattattgattga
acaatttaaaaattacaaagttgTAATAGTACTAACCAACGAAACACTGG
TGCCAAATACCACTACTTCCACCTCAACCTCCTTCCTCTTCCAACTTACT
TTGATTTTATTCCTGACAACAGCTCCTTCGTGGTATGAAGCCCAATCCGA
TTTGTAACTATTTTCTCCAAGAAACTTATAACATAGCACTTGATCACTca
ttttgattattgattgaacaattaaaaaattataaagttgTAATAGTACT
AACCAACGAAACACTGGTGCCAAATACCACTACTTCAACCTCAACCTCCT
TCCTCTTCCAACTTACTTTGATTTTATTCCTGACAACAGCTCCTTCGTGG
TATGAAGCCCAATCCGATTTGTAACTATTTTCTCCAAGAAACTTATAACA
TAGCACTTGATCACTCatattgattattgattgaacaatttaaaaaatta
caaagttgtAATAGTACTAACCAACGAAACACTGGTGCCAAATGCCACTA
CTTCAACCTCAACCTCCTTCCTCTTCCAACTTACTTTGATTTTATTCCTG
ACAACAGCTCCTTCGTGGTATGAAGCCCAATCCGATTTGTAACTATTTTC
TCCAAGAAACTTATAACATAGCACTTGATCACTCatattgattattgatt
gaacaatttaaaaaattacaaagttgtAATAGTACTAACCAACGAAACAC
TGGTGCCAAATGCCACTACTTCAACCTCAACCTCCTTCCTCTTCCAACTT
ACTTTGATTTTATTCCTGACAACAGCTCCTTCGTGGTATGAAGCCCAATC
CGATTTGTAACTATTTTCTCCAAGAAACTTATAACATAGCACTTGATCAC
TCatattgattattgattgaacaatttaaaaaattacaaagttgtAATAG
TACTAACCAACGAAACACTGGTGCCAAATGCCACTACTTCAACCTCAACC
TCCTTCCTCTTCCAACTTACTTTGATTTTATTCCTGACAACAGCTCCTTC
GTGGTATGAAGCCCAATCCGATTTGTAACTATTTTCTCC Run BLAST on NCBI transcript from alignment at scaffold_387:62306..63794 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063384 ID=TCONS_00063384|Name=TCONS_00063384|organism=Clytia hemisphaerica|type=transcript|length=1489bp|location=Sequence derived from alignment at scaffold_387:62306..63794 (Clytia hemisphaerica)
GGAGAAAATAGTTACAAATCGGATTGGGCTTCATACCACGAAGGAGCTGT
TGTCAGGAATAAAATCAAAGTAAGTTGGAAGAGGAAGGAGGTTGAGGTTG
AAGTAGTGGCATTTGGCACCAGTGTTTCGTTGGTTAGTACTATTacaact
ttgtaattttttaaattgttcaatcaataatcaatatGAGTGATCAAGTG
CTATGTTATAAGTTTCTTGGAGAAAATAGTTACAAATCGGATTGGGCTTC
ATACCACGAAGGAGCTGTTGTCAGGAATAAAATCAAAGTAAGTTGGAAGA
GGAAGGAGGTTGAGGTTGAAGTAGTGGCATTTGGCACCAGTGTTTCGTTG
GTTAGTACTATTacaactttgtaattttttaaattgttcaatcaataatc
aatatGAGTGATCAAGTGCTATGTTATAAGTTTCTTGGAGAAAATAGTTA
CAAATCGGATTGGGCTTCATACCACGAAGGAGCTGTTGTCAGGAATAAAA
TCAAAGTAAGTTGGAAGAGGAAGGAGGTTGAGGTTGAAGTAGTGGCATTT
GGCACCAGTGTTTCGTTGGTTAGTACTATTacaactttgtaattttttaa
attgttcaatcaataatcaatatGAGTGATCAAGTGCTATGTTATAAGTT
TCTTGGAGAAAATAGTTACAAATCGGATTGGGCTTCATACCACGAAGGAG
CTGTTGTCAGGAATAAAATCAAAGTAAGTTGGAAGAGGAAGGAGGTTGAG
GTTGAAGTAGTGGTATTTGGCACCAGTGTTTCGTTGGTTAGTACTATTAc
aactttataattttttaattgttcaatcaataatcaaaatgAGTGATCAA
GTGCTATGTTATAAGTTTCTTGGAGAAAATAGTTACAAATCGGATTGGGC
TTCATACCACGAAGGAGCTGTTGTCAGGAATAAAATCAAAGTAAGTTGGA
AGAGGAAGGAGGTTGAGGTGGAAGTAGTGGTATTTGGCACCAGTGTTTCG
TTGGTTAGTACTATTAcaactttgtaatttttaaattgttcaatcaataa
tcaaaatgAGTGATCAAGTGCTTTGTTATAAGTTTCAAGGCGAAAACAAC
TACAAGTCAGATTGGGCATCCTATTATCAAGGGGCTGTCGTCGGCGATAT
GATAAAGGTGACTTGGAAGAGGAAGGAGGTGGAGGTGGAAGTGGTGGCAT
TTGGCACAGAACAAGAGATAACAGGTATTTTCTAATACCTCTGATATGTT
TATTGTGATGTCTTATTTTGAGAGCTCTGTAAAGATTTcaaaacccagtg
cccccctcCCGGGTATCTGGATAATATGAATAATCTTAAAATATCCTGTA
GTTAAAAATTTACTACagcaattaaattaaatttaggtttttagGGTAGG
CTATATTATTTGAAGTAGAATATTATTTAGACAACAGGTTATCTACAGGT
TACGATTTTTACATATTTCTGTTAAAAGTTGTATATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063384-exon-scaffold_387-1491911889:62306..63794 | TCONS_00063384-exon-scaffold_387-1491911889:62306..63794 | Clytia hemisphaerica | exon |
| TCONS_00063384-exon-scaffold_387-1510915933:62306..63794 | TCONS_00063384-exon-scaffold_387-1510915933:62306..63794 | Clytia hemisphaerica | exon |
| TCONS_00063384-exon-scaffold_387-1575043694:62306..63794 | TCONS_00063384-exon-scaffold_387-1575043694:62306..63794 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_387 | supercontig | scaffold_387:62306..63794 . |
Blast
The following BLAST results are available for this feature:
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