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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063290 ID=TCONS_00063290|Name=TCONS_00063290|organism=Clytia hemisphaerica|type=transcript|length=362bp
ggTTTTTATGCTGGTATAATTGCATCATCATTGTTTGTTGGTCGATTTTT
TGGAGGATACTTTTGGGGTTGGCTGACAGACAAGATTGGTCGACGTCCAG
TCCTTCTCCTCTCCTCGACTCTGGTGTTATTGGCAACCCTTGCGTTTGGA
TTCTCGACCACCTTTGAAGTTGCAGTGCTGACCAGGTTTCTTCAAGGATT
ATTCAATGGTGTCATAGTATGTGGGCGAGCAGCGTTCGCAGAAATATGTG
ACGAAACAAACCAAGCTATTGGAGTATCTTTGGTATTTGCAGCATGGAAT
TCAGCAATCGTTTTTGGCCCTGCAGTTGGAGgatttttagcCGAACCAGT
AAAGAAATATCC Run BLAST on NCBI transcript from alignment at scaffold_385:445651..447484- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063290 ID=TCONS_00063290|Name=TCONS_00063290|organism=Clytia hemisphaerica|type=transcript|length=1834bp|location=Sequence derived from alignment at scaffold_385:445651..447484- (Clytia hemisphaerica)
GGTTTTTATGCTGGTATAATTGCATCATCATTGTTTGTTGGTCGATTTTT
TGGAGGGTAAGATTTATAGTTTTTTTTGGATCGAGGCTGCATGTAATTTG
TGTGTTTTTTTTTAAGATGTCTGCGATTCAGAACAAGAGAACTCAAATAA
TGGATGGACTGTAAAAATATTTTTGATCGAAAGTAGTAAGAAAGTTCCTT
TCAAATCCACCAAAATAAGTCAACATTTGAAATGTTTGTCGCTGAATTTT
ATTTTCTTCGAATTATAGCTTCTTGTCAAAATAAGTTCTCTCTAAAACTA
AAAAAGTCTATCGTACATATCCGTTAATGTGTTTTTAGCCGTTTGATATT
CTTTACGGCATTCAGCGACATGTCATTGTTGGTCAATCCCGTTCATTGTC
TTTTCTCTCCGGTACCTTGTTGTTTTTATCGTTATTCGAAATTTCAGATA
CTTTTGGGGTTGGCTGACAGACAAGATTGGTCGACGTCCAGTCCTTCTCC
TCTCCTCGACTCTGGTGTTATTGGCAACCCTTGCGTTTGGATTCTCGACC
ACCTTTGAAGTTGCAGTGCTGACCAGGTTTCTTCAAGGATTATTCAATGG
TAATGCAATCATCGTTAATTTCATGATCACAGACCCATTGGGTTGAGTCT
CACTGGAAGATTTGGCCATTCATCTCCAGTTGAAAAATTACCTTACAATT
TCCGTGATAAAACTCATTGAAGGGATGTAAAAGGAAGAAGTAAAAGGTGT
TGGTGTTTTAGTGAAAAAGGAATCACCCCAACCTATCCAAAAAGAGAATT
TCGAATAAGTTCTTATTGCCTAAAATAAGCGTTTCGCAAAAAATTGTTAG
TTAATTTGGAAAATCAAAAACAAACTAAAATTCAATAAACTACAATATTT
GAAAAAAAGCAAAAACCACAGCCTTGAATCTTTAGTTTTCTAATAAAATA
AAATATAATATCTTTCTAGGTGTCATAGTATGTGGGCGAGCAGCGTTCGC
AGAAATATGTGACGAAACAAACCAAGCTATTGGAGTATCTTTGGTATTTG
CAGCATGGAATTCAGCAATCGTTTTTGGCCCTGCAGTTGGAGGCACGTTA
TGTTCTTGTTCTAGGAATATCCTGGGGGGGGGGCACTAGTGTTGGCGGAT
GAGGGGTATGTACGGATGGGACCTCCAAAGGCAAAGACCGACCTTTAGAG
AGACTTTTTTGAAAAATGTTCTTCGATTTTTGAAAAACTCCTTACTCTTA
GAGAGACTTTTTCAAAATATTTTTCTAAAAACTTTTGATTTTTACGAGCC
TTAGAGAGTATTTTGAAGGGTGAAAAACCGACTCTTACCGTCATACCTAG
CACCCATTTTTGCTTAAGTACCCCCCCCCGAGGAACATTTAGGTGATTAA
CATGTGTTTTATTTTGGTTCGGTGAACCACTACTTTCGTCAACTAAATAT
GACACAAAAATCAAAATTCATACTCTCACCATTCTCATACTTTTCAGGAT
TTTTAGCCGAGCCAGTAAAGAAATACCCATCAACCTTCAAAGGTAAGAGA
ACACTTTTACTATAAAAGNATGAAACAAAAATCAAAATTCATACTCTCAC
CTACCTACGTCCGCTACAGTGATAATAAAGGCAGGTATATATGATGGTAT
GGTGCTATGGCGGTATACGGAAAAAAATCGGCGGAGAGTTTAGAAGACTG
GCAACCGTTTGCGAATTTTCTTCGGCTTTGGGCCTTTCTCTTAGATAGTG
ATTCGTTTAAGACTATAGCATAGTCTAACTGTCACCATCCTCATACTTTT
CAGGATTTTTAGCCGAACCAGTAAAGAAATATCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063290-exon-scaffold_385-1575043694:447429..447484 | TCONS_00063290-exon-scaffold_385-1575043694:447429..447484 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1575043694:446886..447037 | TCONS_00063290-exon-scaffold_385-1575043694:446886..447037 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1575043694:446393..446515 | TCONS_00063290-exon-scaffold_385-1575043694:446393..446515 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1575043694:445651..445681 | TCONS_00063290-exon-scaffold_385-1575043694:445651..445681 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1510915933:447429..447484 | TCONS_00063290-exon-scaffold_385-1510915933:447429..447484 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1510915933:446886..447037 | TCONS_00063290-exon-scaffold_385-1510915933:446886..447037 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1510915933:446393..446515 | TCONS_00063290-exon-scaffold_385-1510915933:446393..446515 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1510915933:445651..445681 | TCONS_00063290-exon-scaffold_385-1510915933:445651..445681 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1491911889:447429..447484 | TCONS_00063290-exon-scaffold_385-1491911889:447429..447484 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1491911889:446886..447037 | TCONS_00063290-exon-scaffold_385-1491911889:446886..447037 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1491911889:446393..446515 | TCONS_00063290-exon-scaffold_385-1491911889:446393..446515 | Clytia hemisphaerica | exon |
| TCONS_00063290-exon-scaffold_385-1491911889:445651..445681 | TCONS_00063290-exon-scaffold_385-1491911889:445651..445681 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_385 | supercontig | scaffold_385:445651..447484 - |
Blast
The following BLAST results are available for this feature:
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