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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063259 ID=TCONS_00063259|Name=TCONS_00063259|organism=Clytia hemisphaerica|type=transcript|length=1295bp
GATTTCAACTCAACTGAATCTTTTCGAACACTTTACGAACTTGAAGATGA
ATCTTTCGAAATAGTTGCTGGAATATTTTGTTTTNCCGCTACAGTTGTTA
TTTATACGTGCTAGATTTCAACTCAACTGAATCTTTTCGAACACTTTACG
AACTTGaagatgaaaatttcgaaatagtTGCTGGAATATTTTGTTTCGTA
TTTTCCGCATTTATCATTGCTGCCAATTTTACATTCATGTTTGGGTTGTT
CAAAACTAACAAAGGATTAAGTCGCGTTCAGAAGTTATTCGTTTATGTCT
CATGCGTTGATTTACTTACTGGTTTTATTGGTATGCCAATGTTAGGATTT
AGTGTCGTCCGTGGTTTGACATGCCTTCAACAAGCTGTTATGATCTCCTT
CATTGTGTTTCCAGTCATTGCCGATGGATTTGGAATGTTAACTATATCCT
TACTGAGAGTGCGGTCAATAGTTAGGCCGTTAGGATCAACAAAAATGGCT
CGTCGTAAAATGGTTGCAGTTATGGCTTTGCAAAACATTCTGGGTGTAAT
ATTAACACTGGTTTTCTTCCTAGTTTACACTGTAGGCAAGGAAGAtatat
tgaattttcagattgtCAGCTATTTGGCATCTGCGTTTGTGATCAGTTTG
AACGCAGTGATATTGTCATGCGTTTGGTTTACCTTACATCATATCCGAAA
GAAAGAAAGCCAAGGTGACGAGCTAAGTATCGTGGATAAGAGGCGACTAA
TCAACCAGCGGAAATCCAGTAAAACCCTTCTAATCATTGCGTTAGTAATG
TTATTCTCAATGATTTTACAGATGCCATCTCTCATTATATTAAACAAAAG
CTTGAACGATTCAACGCTTTTAGAAGGGAGTACCTTCATCTGGACAAAAC
GAAATgctgatttttcagcttttgtTTCTTCTCTGAACACTGGTTTCAAT
TCAGTCATTTTGATGGCAAGGAGTAATAAAATACGAAAGTTTATAAAGCG
ACGTGTAACTACAGCTTTAACTATGACTACAACTTATTCAACTGACTCTC
AAGGCGTGTAACTACAGCTTTAACTATGACTTTAACTTATTCAACTGACT
CTCAAGGCGTCTGATTATGAAGGCCGTATCGTGTCTAATTTCATCTTGAT
AGTTTTCAataacattttagaaaattttattagTCTTTTTTGCAGCCCTA
AAAACGCCCTGTCtaacagccccggtgaaactgaatagggataaaaattc
tattgttctcgggtcaaaaaaaatcaagtgggGATGCTTTTggag Run BLAST on NCBI transcript from alignment at scaffold_385:335026..336320+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063259 ID=TCONS_00063259|Name=TCONS_00063259|organism=Clytia hemisphaerica|type=transcript|length=1295bp|location=Sequence derived from alignment at scaffold_385:335026..336320+ (Clytia hemisphaerica)
GATTTCAACTCAACTGAATCTTTTCGAACACTTTACGAACTTGAAGATGA
ATCTTTCGAAATAGTTGCTGGAATATTTTGTTTTNCCGCTACAGTTGTTA
TTTATACGTGCTAGATTTCAACTCAACTGAATCTTTTCGAACACTTTACG
AACTTGaagatgaaaatttcgaaatagtTGCTGGAATATTTTGTTTCGTA
TTTTCCGCATTTATCATTGCTGCCAATTTTACATTCATGTTTGGGTTGTT
CAAAACTAACAAAGGATTAAGTCGCGTTCAGAAGTTATTCGTTTATGTCT
CATGCGTTGATTTACTTACTGGTTTTATTGGTATGCCAATGTTAGGATTT
AGTGTCGTCCGTGGTTTGACATGCCTTCAACAAGCTGTTATGATCTCCTT
CATTGTGTTTCCAGTCATTGCCGATGGATTTGGAATGTTAACTATATCCT
TACTGAGAGTGCGGTCAATAGTTAGGCCGTTAGGATCAACAAAAATGGCT
CGTCGTAAAATGGTTGCAGTTATGGCTTTGCAAAACATTCTGGGTGTAAT
ATTAACACTGGTTTTCTTCCTAGTTTACACTGTAGGCAAGGAAGAtatat
tgaattttcagattgtCAGCTATTTGGCATCTGCGTTTGTGATCAGTTTG
AACGCAGTGATATTGTCATGCGTTTGGTTTACCTTACATCATATCCGAAA
GAAAGAAAGCCAAGGTGACGAGCTAAGTATCGTGGATAAGAGGCGACTAA
TCAACCAGCGGAAATCCAGTAAAACCCTTCTAATCATTGCGTTAGTAATG
TTATTCTCAATGATTTTACAGATGCCATCTCTCATTATATTAAACAAAAG
CTTGAACGATTCAACGCTTTTAGAAGGGAGTACCTTCATCTGGACAAAAC
GAAATgctgatttttcagcttttgtTTCTTCTCTGAACACTGGTTTCAAT
TCAGTCATTTTGATGGCAAGGAGTAATAAAATACGAAAGTTTATAAAGCG
ACGTGTAACTACAGCTTTAACTATGACTACAACTTATTCAACTGACTCTC
AAGGCGTGTAACTACAGCTTTAACTATGACTTTAACTTATTCAACTGACT
CTCAAGGCGTCTGATTATGAAGGCCGTATCGTGTCTAATTTCATCTTGAT
AGTTTTCAataacattttagaaaattttattagTCTTTTTTGCAGCCCTA
AAAACGCCCTGTCtaacagccccggtgaaactgaatagggataaaaattc
tattgttctcgggtcaaaaaaaatcaagtgggGATGCTTTTggag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063259-exon-scaffold_385-1491911889:335026..336320 | TCONS_00063259-exon-scaffold_385-1491911889:335026..336320 | Clytia hemisphaerica | exon |
| TCONS_00063259-exon-scaffold_385-1510915933:335026..336320 | TCONS_00063259-exon-scaffold_385-1510915933:335026..336320 | Clytia hemisphaerica | exon |
| TCONS_00063259-exon-scaffold_385-1575043694:335026..336320 | TCONS_00063259-exon-scaffold_385-1575043694:335026..336320 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_385 | supercontig | scaffold_385:335026..336320 + |
Blast
The following BLAST results are available for this feature:
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