TCONS_00063258 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063258
Unique NameTCONS_00063258
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1165

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063258 ID=TCONS_00063258|Name=TCONS_00063258|organism=Clytia hemisphaerica|type=transcript|length=1165bp
AAGCTAACAAAATTGAAATGGATAACCGAACTAAGCTACCGCCAATGAGT
TATTTCAAATTCCGCTACAGTTGTTATTTGTACGTGCTAGATTTCAACTC
AACTGAATCTTTTCGAACACTTTACGAACTTGAAGATGAAACTTTCGAAA
TAGTTGCTGGAATATTTTGTTTCGCATTTTCCGCATTCATCATTGCTGCC
AATTTTACATTCATGTTTGGGTTGTTCAAAACTAACAAAGGATTAAGTCG
CGTTCAGAAGTTATTCGTTTATGTCTCATGCGTTGATTTACTTACTGGTT
TTATTGGTATGCCAATGTTAGGATTTAGTGTCGTCCGTGGTTTGACATGC
CTTCAACAAGCTGTTATGATCTCCTTCATTGTGTTTCCAGTCATTGCCGA
TGGATTTGGAATGTTAACTATATCCTTACTGAGAGTGCGGTCAATAGTTA
GGCCGTTAGGATCAACAAAAATGGCTCGTCGTAAAATGGTTGTAATTATG
GTATTGCAAAATATTCTGAGTGTAATTTTTACTCTGGTTTTCTTCATAGT
CTACACTGTAGGCAAGGAAGAtatattgaattttcagattgtCAGCTATA
TGGCATCTGCGTTTGTGATCAGTTTGAACGCAGGAATATTGTCATGCGTT
TGGTTTACCTTACATCATATCCGAAAGAAAGAAAACCAAGGTGACGAGCT
AAGTATCGTGGATAAGAGACGACTAATCAACCAGCGGAAATCCAGTAAAA
CCCTTCTAATCATTACGTTAGTAATGTTATTCTCGATGATTTTACAGATG
CCATCTCTCATTATATTAAACAAAAGCTTGAACGATTCAACGCTTTTAGA
AGGGAGTACCTTCATCTGGACAAAACGAAATgctgatttttcagcttttg
tTTCTTCTCTGAACACTGGTTTTAATTCAGTCATTTTGATGGCAAGGAGT
AATAAAATACGAAAGTTTATAAAGCGACGTGTAACTACAGCTTTAACTAT
GATTACAACTTATTCAACTGACTCTCAAGGCGTCTGATTATGAAGGCCGT
ATCGTGTCTAATTTCATCTTGATAGTTTTCAataacattttagaaaattt
tattagTCTTTTTTGCAGCCCTAAAAACGCCCTGTCtaacagccccggtg
aaactgaatagggat
Run BLAST on NCBI

protein sequence of TCONS_00063258-protein

>TCONS_00063258-protein ID=TCONS_00063258-protein|Name=TCONS_00063258-protein|organism=Clytia hemisphaerica|type=polypeptide|length=344bp
ANKIEMDNRTKLPPMSYFKFRYSCYLYVLDFNSTESFRTLYELEDETFEI
VAGIFCFAFSAFIIAANFTFMFGLFKTNKGLSRVQKLFVYVSCVDLLTGF
IGMPMLGFSVVRGLTCLQQAVMISFIVFPVIADGFGMLTISLLRVRSIVR
PLGSTKMARRKMVVIMVLQNILSVIFTLVFFIVYTVGKEDILNFQIVSYM
ASAFVISLNAGILSCVWFTLHHIRKKENQGDELSIVDKRRLINQRKSSKT
LLIITLVMLFSMILQMPSLIILNKSLNDSTLLEGSTFIWTKRNADFSAFV
SSLNTGFNSVILMARSNKIRKFIKRRVTTALTMITTYSTDSQGV
Run BLAST on NCBI

transcript from alignment at scaffold_385:328366..336267+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063258 ID=TCONS_00063258|Name=TCONS_00063258|organism=Clytia hemisphaerica|type=transcript|length=7902bp|location=Sequence derived from alignment at scaffold_385:328366..336267+ (Clytia hemisphaerica)
AAGCTAACAAAATTGAAATGGATAACCGAACTAAGCTACCGCCAATGAGT
TATTTCAAATTCCGCTACAGTTGTTATTTGTACGTGCTAGATTTCAACTC
AACTGAATCTTTTCGAACACTTTACGAACTTGAAGATGAAACTTTCGAAA
TAGTTGCTGGAATATTTTGTTTCGCATTTTCCGCATTCATCATTGCTGCC
AATTTTACATTCATGTTTGGGTTGTTCAAAACTAACAAAGGATTAAGTCG
CGTTCAGAAGTTATTCGTTTATGTCTCATGCGTTGATTTACTTACTGGTT
TTATTGGTATGCCAATGTTAGGATTTAGTGTCGTCCGTGGTTTGACATGC
CTTCAACAAGCTGTTATGATCTCCTTCATTGTGTTTCCAGTCATTGCCGA
TGGATTTGGAATGTTAACTATATCCTTACTGAGAGTGCGGTCAATAGTTA
GGCCGTTAGGATCAACAAAAATGGCTCGTCGTAAAATGGTTGTAATTATG
GTATTGCAAAATATTCTGAGTGTAATTTTTACTCTGGTTTTCTTCATAGT
CTACACTGTAGGCAAGGAAGAtatattgaattttcagattgtCAGCTATA
TGGCATCTGCGTTTGTGATCAGTTTGAACGCAGGAATATTGTCATGCGTT
TGGTTTACCTTACATCATATCCGAAAGAAAGAAAACCAAGGTGACGAGCT
AAGTATCGTGGATAAGAGACGACTAATCAACCAGCGGAAATCCAGTAAAA
CCCTTCTAATCATTACGTTAGTAATGTTATTCTCGATGATTTTACAGATG
CCATCTCTCATTATATTAAACAAAAGCTTGAACGATTCAACGCTTTTAGA
AGGGAGTACCTTCATCTGGACAAAACGAAATgctgatttttcagcttttg
tTTCTTCTCTGAACACTGGTTTTAATTCAGTCATTTTGATGGCAAGGAGT
AATAAAATACGAAAGTTTATAAAGCGACGTGTAACTACAGCTTTAACTAT
GATTACAACTTATTCAACTGACTCTCAAGGCGTGTAACTACAGCTTTAAC
TATGACTTTAACTTTTTCAATTGACTCTCTGATTATGAAGGCCGTATCGT
GTCTAATTTCATCTTAATAGTTTTCAATGACACTTTGAACAATACGCTTT
TGAACTCAATAGTTAAATCGcaatagaaaatttttggagttaaaattttt
tttatcattgaatttcaaatgggtatGAAAATAAAGTCAATTGTCCAATC
GGGCtgaattgtagggtatttttcacaCCAGGGACGAAACTTTAGCCGAA
TATCCAGAGTGTAGAGGGTTCAACCGGGTCTGTGCCAGAGGGGTGTAGCT
TAGGCAGCGATGTTACAGGGGGCGGAAGGTAGAATTGGTCTACTTCGCAC
TTCAATTCTTTTGTAATTAGTctcattattattttattaaataTAATCAA
GTAATTTATTctatttaaatattcttttaattCCTTTTTAAACAAATCAT
CCAAATATGACTTCAGCCCCGAAATTTTGGTTACCAAAAGATCCTGAAGT
CTGTTCTTTTAGGTTATTCTACTTGAAAAGATATTTACAACGGTGAatca
ctttttaaaaacataccataaaatgggtgctgagaaattgttaaaaaagt
actgacatacttttgagacagactttaaatcaaatttaaaagatATCTTA
TAGCAAACCCAACTCATGAAGATTTCAACCCTTGTTTTCATCGATTCGGC
TGGTAGAGCCGTCTTCTCTCCTAGGCTAGACTGGTACACCAGTCGGGGTG
CGATGATATCACGCGAGAAAAGTGAGCGtgggagttaggtaagcgtagga
agaaattttgtcagtGGCAAGGGCTGAAAACTTTGCTTTGTTAATCAGCa
acctctcaccaacttttgctcgttctcctacgcagttTCTATTTTAGCAA
ACGACCACCCTCTTTATGTTCCCGCTCtatgacatgattaattaacagac
tagtttgctagtctacttctctttatttttctttggaaaattgaaCTGTC
TAAGCAGATTTCTTGACATATGATAAAGTTCAGTTTTAACCTAGGTATCA
ATaatcttttgataatttttcttttaattttaagGGTTTATCCATTtagg
atttatttttaaaactaaatCATATATAAAAGATGGAAAATAATCGATCG
ATCGCCCTGGTCAccgagatttgatatttcacagaaaagtgctaccaagg
ggtatttcgggtcccatatcttccgaaggacttttctgtttgccttgaaa
tttaacaaacttcttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaatgaacgttatagcataa
gtagaaaaaaagctcattttttgcaatcgcaaatttaaccgctaaaaatc
gcgaatttttcaaccaaaaatacattgaaatataGGGCTCttaattctct
aaaacaagcaaaaaattaccataattatatttgactgtcaaaagttacag
gcattcttgtttccactgctaattatatctggacagactttaattaacGT
TTCCCTCATATATTTgcttaccgtgaaaagcacaggtcgaaatcatatat
cgacgctgtgccgacgaatcgagattctattcagcgcgcaatcaacgaag
acaaaagtaaccatgacgaccatccaagatcttggatgaggttcaaagtt
gatacttttattcccgtcgttgaaaacacaactcacaaatatcatcaatg
ctttttaaaaagagtcagtgatagagaatcacaacaaaaagtctgtctat
tatttcgattcaattaaaatagcatttccataattaatagtttagtaact
actgttatacatttgggaatcatgtaaaagatNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNtagtaaactgcatactgatacagtctgct
agacattaatatggtaatatttactcttcatctttgattctttctacagt
gattagattgacacatgcccgatgaaatttttattattggtcttcagagg
ttaatatattctttgaaaacttaacctctgatactcagggtaatatttgc
ttcattaaaaaactttcagcaaagttttgattttaacgTCCAACTTGCTC
AAATGAAAACGTTTCATTCATTGATTCATCTCATGGATAGATTGACTTTT
CATATATTTGAAACAGAATTTATGAAACTGTActtgtaaaatttttgatt
ttaggacAGTTTGAGaacgtgaaaaattgaaaagtggtATGGGTATGGGT
CacttttccaccaaaatttAACCTCTCTTTAGGGTCAGGTTTCAATGAAC
ATTTTTGATAATCTACGTATATTAATAAGGGATTATGTAGAACAGGTAGT
AGAAAGTTTTTGTCATTGCTATAAATGGGATCCTCCAGAAAAGTTTTGTA
CATGGAGGGTGGGGTGGAGGATAATTTTATATTGGATATTTCTTCCGGga
gtagtgaaaaatctgcaaaatttgccttgttttaggGGAAAACTTGCGCT
AATTaagggtgattttgaatgttcGGGGGGTAagctgatgcttgtccggg
ggtgagATCCGTTGTCCGGGGGATCAGAATTCACAATATCCGGGGGTACC
ATCCCcccatatttaaattttttctggaagagcccaatcctTTAAGGGAC
CTTGGGTAGCTTAAAAACAACCCTTAAATCTTTCGATGTCTAAGGCAAAT
CgtatttttgacttttctgtTAGCTATATAAAGCAAATtatgtcatttaa
aaaaagatagtatcggtttcaaaaaatagtatcgCTATCGGCTTAACAAA
GAAagtatctttttgaaaaaaaagttaaagtcgttttaacaaagatagtg
tagttttaaaagatagtatttatttccacTTTGGCGCTCCATAGTTTTTC
AAACTTCATTACATACAAACACTTGAGACACTGTTTACCGATCTTTTAAT
AACGAAAACTAAAAGGttctatttttacataagtttcATGTCAGACACAT
ATTACATATCGGGACTGTGTCTGTCTATTGTTTGTATTATGCTTAATAag
caaaaacagtttttcttttcctctttctagccaatcttgctccacatctg
tgtcaattcaatgtgaaaaagtcattaaaatttacGAGTAAAGGTTTGGG
GAcacgagaattttttttttcgcgctggtgcaatgcaacatgctccatcc
caccaacacaagaaaaaagtgtgtgtctcatggtttctttttttattcca
tgggacaaaaagtgacggaaataccccaaaaaaatcaatttcgctccatt
gtcccagggacaaaagtgagagaagcacaaatgttattaaataaaaaatg
ggttggagacacgagaaagcgtttcaggttggtagGATGTTGTATTGCAC
CAACACGAAAAAAACTTCtggtgtccccaagccttaagcaaacgatatca
cttttatttaaaaacataacCTTTGATGTCACGACATCGCTGCAATTTTT
GTAAGCAAAACGAAAACGCTGGCTGTTCTTATGAGTAATGTGATATTGct
aaagataaaaatataataagGACAATTTACAGTTAATTCTACTTAATGTT
TGGATGAGTTTAATCACCCTTGTTCCTGTTCATGTTTTTGTACCGTAAAT
ATATATTCTTATTCCAAATCTTCCAAAAGTTTCCTTTTTTCTCACTGCCT
CATTTCGAAATCCCAAACTTATGCCTCCCAGTTTATCAAACACCCAAAGg
taatactctcgggtacctaatagccgtcccccctgtcccgctaattaatt
tttcgaaaattttccacctaggacattcTAACCCCcggcttattaatttt
tgggaaaatgtttttgaaagtttcctcttttgtcctaattcggCTGTATT
AGctcccttttcaaaaattctccacccaggacatttttattccaaccccc
cccctccACAGCttataaagttttgagattttttccaacttcCCTGCTTA
TTTTAactcccccgcttattccaatccccccggctattaggtacccgaga
gtagttccTAGATTTTCAAATTACGTAAACTCTTTTATTTAGTAGCTTGT
TTTTTACCCTGCATTAGTAATAATTCTTCAGTTTTTTTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcgatacaaaaatt
aaaaaactttttttacggTTTTCCGTAGGGGCTGTGTAaaatcaatttct
gaaaaagaaatagTGTAACGAcagaattcgaaaaaaaattgacaaaactt
TTCTTCTTGTCATATAGCGTGAAAAACCTAAAACAATAACCTGAACAATT
TTTCTTCTCAGGTGAATTTCTTGTAAGTTAGGTGTGAAATGCTTCCTCCT
CTCGGGCGATCTCCTCATAATTTTCTGGATGAATGCTCTTTTTTAATCCT
TTAATTCATGTTATTAATTCACTtatcgatttcaaattttgagattagaa
cttcatttttgtAACTTGTAGAAGCcaacaaaattgaaatgaataacCGA
AATAAGCTACCGCCAATGAGTTATTTCAAATTCCGCTACAGTTGTTATTT
ATACGTGCTAGATTTCAACTCAACTGAATCTTTTCGAACACTTTACGAAC
TTGAAGATGAATCTTTCGAAATAGTTGCTGGAATATTTTGTTTTNCCGCT
ACAGTTGTTATTTATACGTGCTAGATTTCAACTCAACTGAATCTTTTCGA
ACACTTTACGAACTTGaagatgaaaatttcgaaatagtTGCTGGAATATT
TTGTTTCGTATTTTCCGCATTTATCATTGCTGCCAATTTTACATTCATGT
TTGGGTTGTTCAAAACTAACAAAGGATTAAGTCGCGTTCAGAAGTTATTC
GTTTATGTCTCATGCGTTGATTTACTTACTGGTTTTATTGGTATGCCAAT
GTTAGGATTTAGTGTCGTCCGTGGTTTGACATGCCTTCAACAAGCTGTTA
TGATCTCCTTCATTGTGTTTCCAGTCATTGCCGATGGATTTGGAATGTTA
ACTATATCCTTACTGAGAGTGCGGTCAATAGTTAGGCCGTTAGGATCAAC
AAAAATGGCTCGTCGTAAAATGGTTGCAGTTATGGCTTTGCAAAACATTC
TGGGTGTAATATTAACACTGGTTTTCTTCCTAGTTTACACTGTAGGCAAG
GAAGAtatattgaattttcagattgtCAGCTATTTGGCATCTGCGTTTGT
GATCAGTTTGAACGCAGTGATATTGTCATGCGTTTGGTTTACCTTACATC
ATATCCGAAAGAAAGAAAGCCAAGGTGACGAGCTAAGTATCGTGGATAAG
AGGCGACTAATCAACCAGCGGAAATCCAGTAAAACCCTTCTAATCATTGC
GTTAGTAATGTTATTCTCAATGATTTTACAGATGCCATCTCTCATTATAT
TAAACAAAAGCTTGAACGATTCAACGCTTTTAGAAGGGAGTACCTTCATC
TGGACAAAACGAAATgctgatttttcagcttttgtTTCTTCTCTGAACAC
TGGTTTCAATTCAGTCATTTTGATGGCAAGGAGTAATAAAATACGAAAGT
TTATAAAGCGACGTGTAACTACAGCTTTAACTATGACTACAACTTATTCA
ACTGACTCTCAAGGCGTGTAACTACAGCTTTAACTATGACTTTAACTTAT
TCAACTGACTCTCAAGGCGTCTGATTATGAAGGCCGTATCGTGTCTAATT
TCATCTTGATAGTTTTCAataacattttagaaaattttattagTCTTTTT
TGCAGCCCTAAAAACGCCCTGTCtaacagccccggtgaaactgaataggg
at

Coding sequence (CDS) from alignment at scaffold_385:328366..336267+

>TCONS_00063258 ID=TCONS_00063258|Name=TCONS_00063258|organism=Clytia hemisphaerica|type=CDS|length=2070bp|location=Sequence derived from alignment at scaffold_385:328366..336267+ (Clytia hemisphaerica)
GCTAACAAAATTGAAATGGATAACCGAACTAAGCTACCGCCAATGAGTTA
TTTCAAATTCCGCTACAGTTGTTATTTGTACGTGCTAGATTTCAACTCAA
CTGAATCTTTTCGAACACTTTACGAACTTGAAGATGAAACTTTCGAAATA
GTTGCTGGAATATTTTGTTTCGCATTTTCCGCATTCATCATTGCTGCCAA
TTTTACATTCATGTTTGGGTTGTTCAAAACTAACAAAGGATTAAGTCGCG
TTCAGAAGTTATTCGTTTATGTCTCATGCGTTGATTTACTTACTGGTTTT
ATTGGTATGCCAATGTTAGGATTTAGTGTCGTCCGTGGTTTGACATGCCT
TCAACAAGCTGTTATGATCTCCTTCATTGTGTTTCCAGTCATTGCCGATG
GATTTGGAATGTTAACTATATCCTTACTGAGAGTGCGGTCAATAGTTAGG
CCGTTAGGATCAACAAAAATGGCTCGTCGTAAAATGGTTGTAATTATGGT
ATTGCAAAATATTCTGAGTGTAATTTTTACTCTGGTTTTCTTCATAGTCT
ACACTGTAGGCAAGGAAGAtatattgaattttcagattgtCAGCTATATG
GCATCTGCGTTTGTGATCAGTTTGAACGCAGGAATATTGTCATGCGTTTG
GTTTACCTTACATCATATCCGAAAGAAAGAAAACCAAGGTGACGAGCTAA
GTATCGTGGATAAGAGACGACTAATCAACCAGCGGAAATCCAGTAAAACC
CTTCTAATCATTACGTTAGTAATGTTATTCTCGATGATTTTACAGATGCC
ATCTCTCATTATATTAAACAAAAGCTTGAACGATTCAACGCTTTTAGAAG
GGAGTACCTTCATCTGGACAAAACGAAATgctgatttttcagcttttgtT
TCTTCTCTGAACACTGGTTTTAATTCAGTCATTTTGATGGCAAGGAGTAA
TAAAATACGAAAGTTTATAAAGCGACGTGTAACTACAGCTTTAACTATGA
TTACAACTTATTCAACTGACTCTCAAGGCGTCTGAGCTAACAAAATTGAA
ATGGATAACCGAACTAAGCTACCGCCAATGAGTTATTTCAAATTCCGCTA
CAGTTGTTATTTGTACGTGCTAGATTTCAACTCAACTGAATCTTTTCGAA
CACTTTACGAACTTGAAGATGAAACTTTCGAAATAGTTGCTGGAATATTT
TGTTTCGCATTTTCCGCATTCATCATTGCTGCCAATTTTACATTCATGTT
TGGGTTGTTCAAAACTAACAAAGGATTAAGTCGCGTTCAGAAGTTATTCG
TTTATGTCTCATGCGTTGATTTACTTACTGGTTTTATTGGTATGCCAATG
TTAGGATTTAGTGTCGTCCGTGGTTTGACATGCCTTCAACAAGCTGTTAT
GATCTCCTTCATTGTGTTTCCAGTCATTGCCGATGGATTTGGAATGTTAA
CTATATCCTTACTGAGAGTGCGGTCAATAGTTAGGCCGTTAGGATCAACA
AAAATGGCTCGTCGTAAAATGGTTGTAATTATGGTATTGCAAAATATTCT
GAGTGTAATTTTTACTCTGGTTTTCTTCATAGTCTACACTGTAGGCAAGG
AAGAtatattgaattttcagattgtCAGCTATATGGCATCTGCGTTTGTG
ATCAGTTTGAACGCAGGAATATTGTCATGCGTTTGGTTTACCTTACATCA
TATCCGAAAGAAAGAAAACCAAGGTGACGAGCTAAGTATCGTGGATAAGA
GACGACTAATCAACCAGCGGAAATCCAGTAAAACCCTTCTAATCATTACG
TTAGTAATGTTATTCTCGATGATTTTACAGATGCCATCTCTCATTATATT
AAACAAAAGCTTGAACGATTCAACGCTTTTAGAAGGGAGTACCTTCATCT
GGACAAAACGAAATgctgatttttcagcttttgtTTCTTCTCTGAACACT
GGTTTTAATTCAGTCATTTTGATGGCAAGGAGTAATAAAATACGAAAGTT
TATAAAGCGACGTGTAACTACAGCTTTAACTATGATTACAACTTATTCAA
CTGACTCTCAAGGCGTCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039642XLOC_039642Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063258-proteinTCONS_00063258-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063258-exon-scaffold_385-1491911889:328366..329394TCONS_00063258-exon-scaffold_385-1491911889:328366..329394Clytia hemisphaericaexon
TCONS_00063258-exon-scaffold_385-1510915933:328366..329394TCONS_00063258-exon-scaffold_385-1510915933:328366..329394Clytia hemisphaericaexon
TCONS_00063258-exon-scaffold_385-1575043694:328366..329394TCONS_00063258-exon-scaffold_385-1575043694:328366..329394Clytia hemisphaericaexon
TCONS_00063258-exon-scaffold_385-1491911889:336132..336267TCONS_00063258-exon-scaffold_385-1491911889:336132..336267Clytia hemisphaericaexon
TCONS_00063258-exon-scaffold_385-1510915933:336132..336267TCONS_00063258-exon-scaffold_385-1510915933:336132..336267Clytia hemisphaericaexon
TCONS_00063258-exon-scaffold_385-1575043694:336132..336267TCONS_00063258-exon-scaffold_385-1575043694:336132..336267Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_385supercontigscaffold_385:328366..336267 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.870024	0.801948	0.316862	0.267328	0.0500457	0	0	0	0.121599	0.441769	0	0.352809	0.157319	0.177576	0	0.144689	0	0.434918	0.170228	0	0.22577	0	0.474793	0.323163	0	2.08959e-09	0.203544	0.217228	0.232317	0.415773
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063258 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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