|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063240 ID=TCONS_00063240|Name=TCONS_00063240|organism=Clytia hemisphaerica|type=transcript|length=1237bp
CGCGGTATCGACGGATAGGTAAGTAGAGATTACTTGGTTTCAGCCTAATT
AAGATATGATATCAATCAACGAGTTGAGCATCCCATTGTGCACAGGGAGA
TGTCAACGTAAGAGTTGGAAGGATATTTTACCTTTGTTCGGTTGTTTAAG
TTCGTGGAAACAATTGAATGAGATATGGTTTATTTACGATGGTATTCCTG
TCTGAAGACAGAGGAATTGATATTCGTTACCGAATTGAGATATTTTATTA
AGCGATATTTATTACACCGATTACGATATTcaaagagagagagaaagaga
gttATTTATAAATTCGATGGCAATCGATAACACCGAACCAGCAACAATTA
TCTTACCATTATTGAGAGAAGAGGTTGGNAAGAGAGTTATTTATAAATTC
GATGGCAATCGATAACACCGAACCAGCAACAATTATCTTACCATTATTGA
GAGAAGGGGTTAGATAGAAGATAGACATTCGCGAAGTCATCTTACCGTAA
CGCCTCATGATAAAGTCTGAAAGAACTTTAACCAattgacaatagaaaaa
aaaacgatCGATTGATCAATATCAAATTGATCCCTTGAAGGATAACGACT
AAATTAACGCAACAAGAAAGACCATGGCaatgaaagagaagaaaatgaat
ATAGACATTACACAAATAATTCATTGAAAATATACGAACAATGAACTTGT
AGGAGTATAAAGTTACAGAAGAAACTCCTGAGTAGAAGCTGGCGCAGAAG
TGTTATGAGGAGACTTCTCAGCTACTACGGGTCAAATCAGGGATTTGACT
GGTATACATGTATACGAGCAAATTACGCGGTAATTTGAGAGAAATAAGAA
GCAAAGAAGACTCGAGCAAAACGTAtagctaaaaataaaacaaaaactga
aTACACGTATTTTAATAGACATAACTAAAAGACAATGAACAAAAGACGAT
gcataaaattcaattttttcttttagaagTAGAACAATTAAGTGAAAAAT
TATAACTGAAACCAATTAATGAACCGACATATTGATGACAGATCATTAGA
AGTGGAAAAGACAGAACACTGAGAACAACCCAATTTTAATTGAACATTCN
attttttcttttaaaagtagaACAATTAAGTGAAAAATTATAACTGAAAC
CAATTAATGAACCGACATATTGATGACAGATCATTAGAAGTGGAAAAGAC
AGAACACTGAGAACAACCCAATTTTAATTGAACATTC Run BLAST on NCBI transcript from alignment at scaffold_384:376932..378168 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063240 ID=TCONS_00063240|Name=TCONS_00063240|organism=Clytia hemisphaerica|type=transcript|length=1237bp|location=Sequence derived from alignment at scaffold_384:376932..378168 (Clytia hemisphaerica)
GAATGTTCAATTAAAATTGGGTTGTTCTCAGTGTTCTGTCTTTTCCACTT
CTAATGATCTGTCATCAATATGTCGGTTCATTAATTGGTTTCAGTTATAA
TTTTTCACTTAATTGTtctacttttaaaagaaaaaatNGAATGTTCAATT
AAAATTGGGTTGTTCTCAGTGTTCTGTCTTTTCCACTTCTAATGATCTGT
CATCAATATGTCGGTTCATTAATTGGTTTCAGTTATAATTTTTCACTTAA
TTGTTCTActtctaaaagaaaaaattgaattttatgcATCGTCTTTTGTT
CATTGTCTTTTAGTTATGTCTATTAAAATACGTGTAttcagtttttgttt
tatttttagctaTACGTTTTGCTCGAGTCTTCTTTGCTTCTTATTTCTCT
CAAATTACCGCGTAATTTGCTCGTATACATGTATACCAGTCAAATCCCTG
ATTTGACCCGTAGTAGCTGAGAAGTCTCCTCATAACACTTCTGCGCCAGC
TTCTACTCAGGAGTTTCTTCTGTAACTTTATACTCCTACAAGTTCATTGT
TCGTATATTTTCAATGAATTATTTGTGTAATGTCTATattcattttcttc
tctttcattGCCATGGTCTTTCTTGTTGCGTTAATTTAGTCGTTATCCTT
CAAGGGATCAATTTGATATTGATCAATCGatcgtttttttttctattgtc
aatTGGTTAAAGTTCTTTCAGACTTTATCATGAGGCGTTACGGTAAGATG
ACTTCGCGAATGTCTATCTTCTATCTAACCCCTTCTCTCAATAATGGTAA
GATAATTGTTGCTGGTTCGGTGTTATCGATTGCCATCGAATTTATAAATA
ACTCTCTTNCCAACCTCTTCTCTCAATAATGGTAAGATAATTGTTGCTGG
TTCGGTGTTATCGATTGCCATCGAATTTATAAATaactctctttctctct
ctctttgAATATCGTAATCGGTGTAATAAATATCGCTTAATAAAATATCT
CAATTCGGTAACGAATATCAATTCCTCTGTCTTCAGACAGGAATACCATC
GTAAATAAACCATATCTCATTCAATTGTTTCCACGAACTTAAACAACCGA
ACAAAGGTAAAATATCCTTCCAACTCTTACGTTGACATCTCCCTGTGCAC
AATGGGATGCTCAACTCGTTGATTGATATCATATCTTAATTAGGCTGAAA
CCAAGTAATCTCTACTTACCTATCCGTCGATACCGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063240-exon-scaffold_384-1491911889:376932..378168 | TCONS_00063240-exon-scaffold_384-1491911889:376932..378168 | Clytia hemisphaerica | exon |
| TCONS_00063240-exon-scaffold_384-1510915933:376932..378168 | TCONS_00063240-exon-scaffold_384-1510915933:376932..378168 | Clytia hemisphaerica | exon |
| TCONS_00063240-exon-scaffold_384-1575043694:376932..378168 | TCONS_00063240-exon-scaffold_384-1575043694:376932..378168 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_384 | supercontig | scaffold_384:376932..378168 . |
Blast
The following BLAST results are available for this feature:
|
