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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063230 ID=TCONS_00063230|Name=TCONS_00063230|organism=Clytia hemisphaerica|type=transcript|length=1003bp
CTACTCCCAAGAATACTAATTTCTGAAAAGGGGGTACTAGTTTGGAGGGG
CTGATTGTAAATCCCAGCTCCAATAAGAGGCTACGTAAGGTCATATAAGC
TGCCTCACACTCTTCTTGGGTTTTCCCGATTACAAGAAAATCATCAAGAT
AGACAACCACATCCTTGAAGCCACGGCGGGACATAATGCGACGAACCGAT
TGAGTAAGACGATGGAATATACCTGGGGCACTACTGCCCCCAAAGGATAA
GCGAGTATCAACAAAGTAGGTAAAGTGATGATCTCCTGTAAACTTCCACT
TTAACCCTAGAGCATCATGGTTGGCCGGGTGTACAGGAACAGACCTGTAA
GCACGACGAAGGTCAACTTTGGCAATAAAATAGTCCTTCCCTATCAGTTT
GGTGGCATCACTTAGGGATTGAAAGGACTGCTTTTCAACAGAAATGTAGG
AGTTAACTCATTTGCCCGTAGGTATTAGACAGTCATGAATAATGCGAATG
TCATCAGAATCTGGCTTTGGAACAGCTCCAAGTGCACTGACAATTGATGG
CTTAGAATTAACAGCGACATAATTACCAGCCACAATCTCCTCGAGGATAG
CTTTGTCAACTTTCTCTTTAAAGATTGGACCGGTGACAGAAGAATAGTTC
TCCATCTCCGCTGGAGTGATAGAGGAATCTGAGGGCAAGAGCTGAAATCC
ATTTTCGACCCCTTCAAGAATGAAGGCTCGATCTGGATCATCTCTAAGTT
CCCTCTCCCAAACAGAAAGACAACGGAGAAAGAGGTCATTGGCCCGGAGG
ACCTACCTCTAAAGACGAGTGAAGGCACCCTTGGTGATTCTTCCCACAGG
CCTGTGAACCAACTTTCCGGTTGCAGACATGGGTGTACTTACAAGTGGAC
CTTTGACAACCTTTTTTACTGTTGTACAACCTGCATATTTCTTCCCCGTT
TGGAAGGCGTGCAACACTGAAGGATTTCAAGTTGCCCGACTCGCCAGGGT
TAT Run BLAST on NCBI transcript from alignment at scaffold_384:249540..250542 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063230 ID=TCONS_00063230|Name=TCONS_00063230|organism=Clytia hemisphaerica|type=transcript|length=1003bp|location=Sequence derived from alignment at scaffold_384:249540..250542 (Clytia hemisphaerica)
ATAACCCTGGCGAGTCGGGCAACTTGAAATCCTTCAGTGTTGCACGCCTT
CCAAACGGGGAAGAAATATGCAGGTTGTACAACAGTAAAAAAGGTTGTCA
AAGGTCCACTTGTAAGTACACCCATGTCTGCAACCGGAAAGTTGGTTCAC
AGGCCTGTGGGAAGAATCACCAAGGGTGCCTTCACTCGTCTTTAGAGGTA
GGTCCTCCGGGCCAATGACCTCTTTCTCCGTTGTCTTTCTGTTTGGGAGA
GGGAACTTAGAGATGATCCAGATCGAGCCTTCATTCTTGAAGGGGTCGAA
AATGGATTTCAGCTCTTGCCCTCAGATTCCTCTATCACTCCAGCGGAGAT
GGAGAACTATTCTTCTGTCACCGGTCCAATCTTTAAAGAGAAAGTTGACA
AAGCTATCCTCGAGGAGATTGTGGCTGGTAATTATGTCGCTGTTAATTCT
AAGCCATCAATTGTCAGTGCACTTGGAGCTGTTCCAAAGCCAGATTCTGA
TGACATTCGCATTATTCATGACTGTCTAATACCTACGGGCAAATGAGTTA
ACTCCTACATTTCTGTTGAAAAGCAGTCCTTTCAATCCCTAAGTGATGCC
ACCAAACTGATAGGGAAGGACTATTTTATTGCCAAAGTTGACCTTCGTCG
TGCTTACAGGTCTGTTCCTGTACACCCGGCCAACCATGATGCTCTAGGGT
TAAAGTGGAAGTTTACAGGAGATCATCACTTTACCTACTTTGTTGATACT
CGCTTATCCTTTGGGGGCAGTAGTGCCCCAGGTATATTCCATCGTCTTAC
TCAATCGGTTCGTCGCATTATGTCCCGCCGTGGCTTCAAGGATGTGGTTG
TCTATCTTGATGATTTTCTTGTAATCGGGAAAACCCAAGAAGAGTGTGAG
GCAGCTTATATGACCTTACGTAGCCTCTTATTGGAGCTGGGATTTACAAT
CAGCCCCTCCAAACTAGTACCCCCTTTTCAGAAATTAGTATTCTTGGGAG
TAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063230-exon-scaffold_384-1491911889:249540..250542 | TCONS_00063230-exon-scaffold_384-1491911889:249540..250542 | Clytia hemisphaerica | exon |
| TCONS_00063230-exon-scaffold_384-1510915933:249540..250542 | TCONS_00063230-exon-scaffold_384-1510915933:249540..250542 | Clytia hemisphaerica | exon |
| TCONS_00063230-exon-scaffold_384-1575043694:249540..250542 | TCONS_00063230-exon-scaffold_384-1575043694:249540..250542 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_384 | supercontig | scaffold_384:249540..250542 . |
Blast
The following BLAST results are available for this feature:
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