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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063190 ID=TCONS_00063190|Name=TCONS_00063190|organism=Clytia hemisphaerica|type=transcript|length=1601bp
AAATGCCGTGATCTGATTCGTTACTTTCTCACTCTTgcaaatcaaaattt
gagattAGCAAAAGGTTTGATTAAAAGATTACTTTTAGGTCGTTCCTCTT
GCTACTTCACTCTAAAGTCTGTTTATCACATTTGTTTCCTGGTTTGAATA
AATAAGATGGagcaaattaaaaagaaaatggcaATACTTAGAGAGAAGCT
TGAAAAGGCTGAGGAACGTTCCAAAAAAGCTGAAGACGAACTACAAAACT
CAAACAACAAAGCTGAAGAGTCTGAAACAGAAGTTGGGCGTCTGCAAAAA
GAATTGGGAAATTTAGAAGACGAATTAGACACATCTGAAACTAAATTGGC
AAAGATCACTGCAAGGTTACATGAGGCAGAAAAACAGGCAGATGAAAGTG
AGCGTGCTCGACGTGTTTTGGAAGACCGTGGTCAAACAGACGATGACAGG
TTAGCTAAACTACAAGCAGAATACGAAGATGTTGTCTCCAAAAATGCAGA
TGTGGAAGATCGATACTCACAGatttcttcgGAAATTGAAGATTTAGAAC
GACATCTCGAAGATGAAGAACAAAAAGCTGTCCAAGCAGAAGAAATGTCG
AAAACATTGGATAAAACGTTAACGGAGGTTGGCAACTCCTTACGTTTGAT
GGAACGTAACGACAAAGACGCGTCAGAGCGGGAAGATAAGTTGTCATCAA
AACTTGCAGCTATGAAGCAAACATACACGGAGGCTGAGTCACGTGCTTCT
AAATACGAAGATCACTCAAAAGAATTGGAATCCACCCTCGATGATTTACA
AGATAAATTGGAGGAGGAAAGGAACCTATACGATAAAGTCAAAGGTGATC
TCGACAATCTCCTGGCTGAGATCCAAAACTTGAATGTCTAAATGAACTAT
TAACTATTGAATGACCACTGATTTCACAAATAAACAAAAGACCCAACATT
TCAACAATGTAATTATCATTTTATTATGCATATTTTAAATTGTATGGTTT
TAGTTACTCTTTTAGTTGCTCTTATTGCTgctgttttgttgttgtttaca
TGTTTGAATTTCATCTTTAGATTAGACCTCTCATAAAATAAACGTCATGA
ATACTTACCTCATTTGAAATAATGATGCAGCTGTCAaccatttaaaggtt
ttgtttttaagtaagagtgatatcgtttgcttactcatcaattttaattc
acaagctttttcacattgaattgacacgaatgtggagcaagatcggtcag
aaagaggaaaagaaaaacattttttgcttatatcagcataatataacaat
agtaagacactgtcctgaaatgaaatatgtgtctgatatgaaacgggaaa
aaATGCACCTGATGCTTATAACATCCAAACAGTTTAGCATAATATCGCAC
TGCCTGGACCTCTCTAAACTAATTTTTTATTGCTAAGTTCAAaaatgttg
tattttttactgtagTTGTTTTTATGAGCATTGTATCTATGTATTTTACT
GTTTATGACCCCCTTAAATAAATTTAGCATCTTTTTTGTGAATGTATATA
TTccttatttgtttttttttctaaaaaatacttcaaataaTATTTATAAG
A Run BLAST on NCBI transcript from alignment at scaffold_384:89286..108678+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063190 ID=TCONS_00063190|Name=TCONS_00063190|organism=Clytia hemisphaerica|type=transcript|length=19393bp|location=Sequence derived from alignment at scaffold_384:89286..108678+ (Clytia hemisphaerica)
AAATGCCGTGATCTGATTCGTTACTTTCTCACTCTTgcaaatcaaaattt
gagattAGCAAAAGGTTTGATTAAAAGATTACTTTTAGGTCGTTCCTCTT
GCTACTTCACTCTAAAGTCTGTTTATCACATTTGTTTCCTGGTTTGAATA
AATAAGATGGagcaaattaaaaagaaaatggcaATACTTAGAGAGAAGCT
TGAAAAGGCTGAGGAACGTTCCAAAAAAGCTGAAGACGAACTACAAAACT
CAAACAACAAAGCTGAAGAGGTATAAATTTTAAACTGTCATGATGTTTGT
TTATGAATCTGTTCATGAATCTGTTCCTCAAAATCCATATGttgatttgt
ttattttcacAGTGTTCTCTTACTACCATTTACATATGGTACTATTGTTT
ACATATGATAATAAAGCAGATGATTAATTTTGCACGTATGGAAAGTCTTG
AGGCATTCCCTTGCTTGCAGACCTCCTGAAAAATACTCACGGTTCAGTCT
CACAAGGCTCACCGTTTTGAATGAACCTAGTCTCACAGGTGCCATTAAAA
TCACATATTTTTTGACTACCACTGGTACTGTCANACCTAGTCTCACAGGT
GCCATtaaaattacatattttttGACTACCACCGGTACTGTCACGTCtgg
tacttaagcgctcggccgcccacgctaaaaaactctaacggagtgatcca
atttagtttaatcgcaatcaaactcattgaccagacggtactaattgata
aaaaattgattaTCGAAGTATtcgataatgatcgaagtaatcgaacaacc
atttatcgattaacaatcgaatttcaagtaccgaaatttcaaaaaaattg
tgagtcttcgatcactttcttaacaacccttcggactgtccggtgtattt
gtccggtggcaaaaagtatcctttcgttacaccggacgcaataggtccgg
tgtcagtccggtgttccATACGGGGAATTTTggcatgaaacaaaaaatta
agaaacaccggacgcgccggactggtcatgtccggtgttttgattgtccg
gtggaaaaaaatatccttctccgacaccggacatacgacttccttaagtc
cggtgtagagattgtccggtggtaaaaaaaattctcattttacaccagac
tttcgcgtgtccggtgtttgttaagtccggtgcgtcggcagggtccttga
AGACTTGATAACCGttcgagtactttgattgttattgattaccgtaaatc
accgattaagcgccccgctcgaataagtgCCCcccatttagttaaaataa
ttttataagcgccccgctcgaataagcgccccccctTTGAATAAGCACCC
CCCTCTAGGGAGGGGTGCTTATTCGAATTGGTGGCCTAGGCTAATTTCCG
GGATAAGAATTTCTCTTCAAATGATTAACAGtcgaaaaaaattaacttgT
ATTGAAGAAGATGAAGACGACGACAAAgatattgttattgattgaataag
atattgtcttaaaaagaaaaaaacgattaagaataaaatgatagaaattg
tcaattggatttttctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatacgaatttctga
aataaaaaataagcgccccgcttgaataagtgccccgcttgaataagcgc
ccccctaagagcctgaaaaattaaataagcgcccgggcgcttaatcggtg
atttacTGATAACTTTGACAACTAAGATAACCAATAGATTACTTTGATAA
TTCTTTAACTAATTTAACTAATTTAAACTAATAActctttaagaaaaacc
aaaaaaactgacctaaaatcaaagcacaaaaagaagacCGGCTATAAAGA
TTGACCTCCTCATATCGCGCGTTCTGATCGGTCggagaaaacaaaagtgg
ttttcgcgcattctgattggtcggagaaaacaaaagtggttttcgcgcat
tctgattggtcagagaaaacaaaagtggttttCGAGCGTGAATCGTGTGT
TTTAATTGGCGGAAATAaacttggtttcagattattttgacgtgctgcta
ctggaaacatatttgataaaatcaatggtattcaatatgatcgaaagTTA
TCGAACAGTAAGCGAAACGATCGAACGAATCAAAAATGGTTGATAAAAAT
GCCATAATTCGGAGATgagtgagtattcgatcaccAATAGAATCGATAAG
TAGTCACTGATCACCTTCGATTCTTATTGACAATGGAATCGCAATTATTT
GATCGTGTTCAATTACGTTTGATTGGTtcaaattgcaatttttgttcaaa
gttgtttgattgacaccgtctggaagtACAGTAGCTAGATTTTATGTTTT
TCAATCTGCATGGGCAAaattcgtttttatcagtttaaaGGTCAGGGTCG
GAGCTTATAGTCAGAATATGGTTGGGAGTAGCATAGATATAGTGAAATAT
AGGGATAAAGGTCCTGGTAGGGGCTAAACCtagtcagaaaatctgccgTA
AAAACTATCTTTGCTTACTTACTTGTGTTACTTGTGTAGTTGTTTGAGCA
TCCTGCTTCAGGTAAGGTTCTCGGTGAACCACGCCTCTGTGTGATCAATC
TGTCGAGAGAAAAAGAATCTCAGCAGATATTTTTTCATGTCAATTATTGA
ATTAGAATTAGCTCTCCTGCACCCAGTATATCCATGGATCTGGGGTTCAT
CTGGGATAGACTTAAGGTGTGTGTCCAGGGCTCNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGAGACCAACTGCAT
TTGGGCTCCAAAGAACGGAGCAATATTCTAATATTGGTATCACCAATGAT
TTATATAGTACGATCATACAATTTAAAGATCGTGTTAAGAAAAAGTTCTC
AGGATCCAAGATGTTAAGTTTTTAGCCTTTTCGATTACTGCAGTAATTTG
CTTCTGAAATGTGCAATTACTGTCCATCAGGATTCCAANNNNNNNNNNNN
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NNNNNNNNNNNNNNNNACTTTCAAGAATTTCTTGTGGATCATCACTGTTA
AGTTTTACATCCCAGTCAATTTGATTCAAATCTTCCTTTAACTTATTCCA
ATCAATTTCATCTGAGAAACttcaaccaagtttatcaatcaaactttcac
catctCATAATCACAGccaaatgtattttttaaaGCATCTCACAATTTTC
CGTGGAAGTACagacttttttatatttgtGATTGGACGCTTGTGCGAATG
AGCGCCAGATCGCATTTAATACGTCTCGTCGCAAAGATTTCAGAGATTGG
TTCCTTTTGCTGTGTGAAAGCCTGCCTGGTGAGAGTAGCGTACTCACATT
ATTTGCTATCTATGATTCATGGTATGTTAATTAAATTAcgttggaggttc
ggtgaaatggtgacCGAATgaccgtcccatgttttgttagATAGTCACAA
GTAAGAGCAGTTGAGCATACTTTTCCCCCCATAAGAATtattaaaggcaa
aaagtagttaAGCTCTAGCTTCTAGACTACAGCAGGACTAACCCTGACAG
TTAAGAAATGAATGATTGTGAATTCGAATTTGAGGATATATACTTTTCAT
GTGAGGGTTTGATACTTGGGATAAGTATCAAACTTGAACTCTAAAAATGA
CAACCTCAAAACATCTTAAAAGTTCAGAAATTCTAGAAACTAAAAACAAA
CAGCTACTAGGTAAAACATTTATATAACACTGTCTCAGCCACCCTGGAGA
AAAAGGGGCAGCAAAAAGATCTTCTACAGATAATTTACGACCAAATGCAG
TGGCGTAATAGGCCTGACTTAAAATGGGCCAGAAAGGTAATTGCCCATAT
TCCTTTCATTCTTTTAGTACGGGGCTATTTTAAAAAGCATGGTACCGATT
TAATTTACTGACCAGGATTAAATCGTGtgtaaaagaataacatacgCTTT
TAGAAATAAATGTAGAGTGATATAATAATAACATATAATACAAATAATAT
AATATGTGTTTATAACATAAGATGATTATGCTTGTTTGCTTTAAACAAGT
GTTTGAGAGAATCAAAGACTACTTCCTAATGTCAATTCATATCCAattat
atttcctgcatcatATTGAGTATAAATGTAATTCTTAACAAAGTAACCTT
AGAACTATTGTATTTTATGATgtcgtcaaaatttttggtagAAAGTGTCA
GTTTAgtgataaaaatgacaaaagaaaatgtcaTTGCTTTCCTTGCTCTA
AAAGCTATCTTTACAAATTTTCCAAGGCTAAAATGACTGTTGATTTGTAT
CCTTTTGTACAATGAGCATCACCTTcagtataataaatatttttggagGA
ATTTGACTTATGAttattatttcaatattttgtaaatatttttacaagaa
agtgcctttttttgtcaGAATTCTGACATGTAAAAAGAGGAGATATTTAA
ATAAGATGTTACTAGCCAGCACCTTACAATTCTTCTGATTTTAAGCTATA
ATATGATGTTGGTTACTTGATTGGAATACTGTTTTGTTTGGTTACTGAAT
TTATTCTGGTCTTacttattctggtctgtaaatttttgaAGTAGGAAAGG
AAAAAAGCAAGATGGCGGCTGATTTAATAAAAAGCAATCGATTTTCACTA
CCTGTCGAAGAACGGCAACTGTGACAAAAGTTTTATGATAATCTTAAATC
TAACTTTATCAAACCATCAATGAAAGGTTTTAGTACCATATTATAATGAA
ATTAAGTCTCATTTAACAAAATTAAGGGCAGAAAGTGGTACCCCAATAAG
TGCACCAATTGGGGTACcatgctttttaaaataaccCTTTAGTACGCATC
CTTGCAGAAACCACCccagtttttatatttttaaatgagTGTGACCACCT
CCTTTCAGTAAAAAACGAAGGGAAAGTAAATTATGTCAaccaaattttta
gaaaaaaactaatttgaatTCTATTTATTTTGATTAATTAAATTTGTTAG
CTCATGTTAGCATCATCTCTATTTGAAAGAGAAAGTACTTctaattgaaa
aaattatattaaGAAATAAATAATGTGAAATTCTTTCATTACACCTTTTC
ATTGTCTTATTTGCTCAAACAAAGAGCTCAAAAGAGCGCCGATGACACCT
TTCTATGAGCACATATTTTATACTGTGTCAATCTATATAAGAATGTCTCA
ATTCACCTCAATTCAAATAGGAATACGTTTTacaatttgataaaagtttg
cATTAGAAACGTTAGtgaattttatgaagaaaacaaaaaaagctaaacgA
AAGTTGTGGCTAAGAGACAGGGATGCAGAAGTTCAGTTTCATCAATATCT
TGAATCATGATTAGAAGCATTAGTGGTCCCAGCAAGTGTATCCATTCTCT
AGGTAATGGGTCAGTCGTTCAGTGTGTTGGAGCAATTAACTAAGATATGA
TCGGCCTTTCCTAAAGCGATGTTGATTATTGTTATACAGATTGTTTTCTT
CTAAACGGTTCTGTTTCTTGGTTCAAACAATCTTTTCAAAGATCTTTGAT
ATATGTGATGTTTGGATAGTCTATAGTTTTCTGCGAGTCCTTGATTCCCT
TTCTTGTAGACTTGGGAAGTAAAAATATATCTGACGTAATGGTAGATTAc
tattaaaaaaatactattaaAGAAATTCCTTTATGATCTTCtaaaaaatc
gagaaatttaaaaatttcttaatttttctttttactttcagTCTGAAACA
GAAGTTGGGCGTCTGCAAAAAGAATTGGGAAATTTAGAAGACGAATTAGA
CACATCTGAAACTAAATTGGCAAAGATCACTGCAAGGTTACATGAGGCAG
AAAAACAGGCAGATGAAAGTGAGCGTGCTCGACGTGTTTTGGAAGACCGT
GGTCAAACAGACGATGACAGGTTAGCTAAACTACAAGCAGAATACGAAGA
TGTTGTCTCCAAAAATGCAGATGTGGAAGATCGATACTCACAGGTATANC
GATGACAGGTTAGCTAAATTACAAGCAGAATACGAAGATGTTGTCTCCAA
AAATGCAGATGTGGAAGATCGATACTCACAGGTATATTTTGTGTAGCATT
CTTGAAGCTCTTAAAATATGCTGGAATCTGACCCCTGTTTGTTACTAATA
ATAGCAGGCAAGCACTAAGGTCAAATTATAAATTTCTGCTGTTTCCAACA
GGAAAAATGACTTAAAATCTTTTAACAGTTTCTTTATTCATCACATCAAT
GGCttcataaatatttttcaattgatAATAATATAAATTTGTCATTCCAA
CTGCTTACTTTGACcgaatttcttttaatttttagatttcttcgGAAATT
GAAGATTTAGAACGACATCTCGAAGATGAAGAACAAAAAGCTGTCCAAGC
AGAAGAGTaagtcaaatttttcttttatttttgttcgcATAGNTGAAGAA
CAAAAAGCCGTCCAAGCAGAAGAGTaagtcaaatttttcttttatttttg
ttcgcATAGGCTATTGCATATTTTTTAGCGATTGCAATTTTTGGACACAT
CACTATCTCTTCAAGATGATAATTTTTCTGTCACTAACTTCCTTAGTACT
TAGGTATGAAATTGttgaattattttatttcaaagtttaaCGTTAATTTT
TTCCGAGattatttgataaagtttattAAAGTACATATTCACTTATGCCT
GTAACCAAGGCAGATACACACACTCTGTCCTTTACACGTTCTCTAAGAGC
TTTGTTCCCTAACATTTGGATAGAAACGCAATTtcactataaaaaaacat
tatgCATACACATTTTCATACTTTGCAATACCTACATATATATACGAAAT
CcattaaaaaaactttagtTATGATCAAGAGGGCAGGTTGTTTCTGCTTT
AGCATGAAGCACATACTACTAACCTCAATAGAAAAtattattatcattat
cattatcAAACTACAGTACACTACATCTCTACAATGAATCttttaaagat
tgaaaaagAAACTTAACCTCGAAAGGCACACCTACATACATACCCgagtt
ttatttctttttattctcAACCTAACCTATGGTGTTCAGAACACAAACAC
ACATACACACCCATAgatggaaaaaatctcaaatgggTACAAGTCCATTT
TATTTCTTTGTATTCTCAACTTAACTAtggagtgaaaaaaaaacacaaac
acaCATACACGTACAtacaacgaaaaaaaaataatctaaaattgATCCAA
GTCTATTTTATTTCGTTTTATCCTCAACCTAACCTCCGATGAGCAGACGT
GTAAAACACTTGGATAATGAAGTAGTGGTTGTAGGAAACAGTCTAAAGGC
TATGGAAATAAGCGAAAACCAGGCCAGTGCTAGAGAAAACCAATACACTA
CTAAACTCCAAGAAATGAGCACACGGTATCAAGAGGTAAGGGCGCGTTAG
AAGGGCGTTTCATTAGGCGCGAGGGTGTGAAAATCATTTAGGGTGGTTTT
TAGGATGGATTAAAAATGATCTCAAATTTTGGTGTCGTAATCGTCAATCC
TTGTGGAATACACGAATTTCCTATTTTacagattcatgtaaaaaagtcac
gaaaaaacgtcgacTGGAGCGTCAACTAAGATTTTTTTATAGCGGCTGTT
GTGGGCTGTTACCTTTCGTGAAATTATTTCCCTTGAAAAGTTTGGTTACT
GTGAACCAGTGTGAACACCACTTTGTTGGGATCATTTTTAATCAATATCA
taggttggtctaatgtcgacacccctcttctaattttgacacccttcttt
agagatgggAATAACGGGAAGgaagaggggtgtcgacattagaccaactt
acggtacacaGCAGAATGGGGTGGTTTCCTGCTTTCCCTTGTTTCATGAT
ATAATATGACTTTGGGTGAAACCTCAGATTACTTTTGGATCACTTTTTAT
CGccgtttctttacttccaaatatctatatttcaaaaaagaaatatttga
taGTCTTTCGTTAAAGTCCTCAGGTTGAGGTGATCCGAGTAAAATTCGAG
TTACTTACTCAAAGTCATATTGTGTTCATGATTTATTATCCCCATAAGCC
AATTTCATTCATTTATATACATATACACTTCTTTATCTAATCAATACACC
GTTCTCTCAACACCCTCCCGCCCATCCGCCCAAACAGAATGTCGAAAACA
TTGGATAAAACGTTAACGGAGGTTGGCAACTCCTTACGTTTGATGGAACG
TAACGACAAAGACGCGTCAGAGCGGGAAGATAAGTTGTCATCAAAACTTG
CAGCTATGAAGCAAACATACACGGAGGTAATGTAACCCCTCCCTAGCCCT
AAAACCCCCTATCTCTGTCATCGGGTTTTAGTCTAAATTCTTCTCTgctg
tttttttatttaccaATACCATCTGTCTTctattttgatcaatttttatt
tcttttgtttgccCAAAACTTTTTATATGACACGATCTTATCtacactga
aaatgaaaaactaaagATTTTACGTCAAAAGTCTAAGGCTTGTGGTTTTT
GCAAATCAAGGATATAAACCTATCAACCTTTAAAGCGTGAGGAGACTAAG
TTCGAGTTTACCAGGAAGAAATGACTTCAAAATGTCTAAAGCCATGCATT
CACATTCTCATTATAAACAAACATTTTGACATCATTTCCTTGTAAGTTCT
ATCATTACCAGACCCCTCAAAGGCTTACCATACccaaagatttataaagc
ccgaagggctcgatgtcgtgctttaagccatcgcaggcaaaacaaattat
attgttgttattgtttccgaaaacccgcgaagcttctgattggtcaagcg
ctgaaattctattgtaatgtcacgtgacctaggtaggatctcctacctaa
cctcgacacacttttcagcaaaagtttgatatctagcccttcgggcttta
taaatctgacCACACCGTCAGGTTTGATAGGTACATTTTAATCACGCGAG
ATTGTTGTTTCAGGCTTATAAGTTAACCCTTTTAATTTCTGGATACTTTT
TGTTTAATTTCTCTACTTTGATCTCAATTCAGGCTGAGTCACGTGCTTCT
AAATACGAAGATCACTCAAAAGAATTGGAATCCACCCTCGATGATTTACA
AGGTAAGTCTATAACgatttttcaacgtttatctcaCGTTTTATTGGAAC
TGAAATATGACTTTGACCCAAAAAGTACGTAATATACATAAgctctctct
tattcgaacttctattattcttTTTATAATTCTAACTAGTTTCCAGTCCT
CGTCAAGGATGAAACCCTTTGAAANACTTCTATTATTCTTTTTATAATTC
TAACTAGTTTCCAGTCCTCGTCAAGGACGAAACCCTTTGAAAATATTCTC
TATATTTCGAGTCTCTGTAATTCGAGCAAATGAGTTTCCCTgttcgaatt
agtgagagtcaactgtattgtCAGACAATATTattgacaaaacaaaaaat
atattgtGAAGTGCTCAGAATGTATTGAAAAGGTGTTCACTATTATATTC
CAACAAAATAGGGGGAAataagtaaaacaaaaaaatgaagcgactgctta
gATTGAAATGAGCTGCTCCATTAAAAATccgtacagggggggggggatag
acgaacctttttaagtcacaataaaattcttggaaatgtgaggataaccc
ctggaaattggcaaaattttcaaagaaaatcttGGAAATATTTTAAAGAA
TACTTAAGTTACGGTTGACGAACTAAACCTGTCTTTTACCTCcttgaaat
tttagaataactatttaccccctgataaatgaaaaaaacactcatTTAGA
CCCTCTGGAAATTCTTTTCATGGTTACCCCCGGGAAATGTTcgccccccc
ctgtatggagataaaatggaatggcccaatgccCGTCATATTTTATATAG
GATATGGTGTCatgggggtagtgaaaaatctacaaaatttgccatgtccg
gggggtaaacttgctctgtttgggggtaattttgcttggtttatgggtta
ttttgaatgtctcggggtcaactgatgcttgtccggcgggtcagacctgc
tgtccgggggtcaaaattcacaatgtccgggggtcaaaattcacaatgtc
cgggggtaaatttataaaaaaagttatatcctccacccccatattcaatt
ttttttctggaagagcccaatttggTGAAGATATTGTTCTTACCAGACTG
GGAATGTTTTAGTTTTGGTTAGAAGTAATTTTGGCGAATCACAGGGTAAA
TTTGTTTTTAGACAAATTGctttttcaaacaaagattattttagagaatc
ataaaaaactttatttttgcgAGGAACATTGTTCTCGTTTTTTTCGTAGC
GGCTTTCGGCTTAgttttctgtaaaatatttttttctaaaatgacaggta
cgacctttttttaaacacaAAAACGAACGATTTTCAATATATGACAAGGT
AAAATGACTACTTAATTATTTCCTGTCTGTAATTTGAGCGAGATCAATCT
CTCCTCCCAGttgaaaaactatttttcaaaagtcaattaTGACCAGCTAT
GACTGATTTCTAGCACTACAAGAAGCTCTTGAAAAAAGAGcaagttaaaa
ttttgtttttaaaaatataagaGTAATAtcttttgcttactcatcaattt
taattcacaagctttttcacatttgattgacacggacgtggagcaagatt
ggtcagaaaaaggaaaggaaaattttttttgcttatatcagcctaatata
acaatagccagacactgtcctgatatgaaatattatgtgtctgatatgaa
acggaaacacttatgtaaaaataaaacctttaaactttATTTGGACCCCa
cctttgatttgtttttgaaaatagtttcaaaggtcaaaagaaaaatactt
tcttttttgcTAAGCCTAAATTTTTGATTTAGTCCATATTtactttattt
cattttatttccaacccctggaaattaggccccttttattaaaattagaa
aatattttcaaagcaagTTTATTAAACACCCGAGAGTTACTTGCTGTCTG
GTTTATGGCTTCTTCTGTAAATTTGTCTCAtaactcaaatttttttctct
taagtTTAGACAAGAGTGACTGTTTATTTGTTTTGACTAGGCCTGTTCAA
TAGTGTTTTATGGTTTTCATAACTAAGTTTTCTTCTACTGTTATATGTTG
GTCCTCGATTTTAAGTTTGTTTAAGGTTTAAAGAGGAtttcgaaattatt
tttctatgGCCTTGTTTGGAGTTTCGAGGACCTACTTTTGTATGTAACAA
AAATCTAAACTCAACCATCATTCTTTGTCAAGTTTCATCGGGCTtcctca
aattttaaatttaggtTAATTGCAGAACCCTAAAACTctaaatttattaa
tttttgacaGAGTCTAGTGGAGCCAATAAAGGTCAAACTGTTAAGGTTAT
GAGCAGTCTACCATAGTTGATGTCATCAAAAGAAAAGCTTTTCAGTTTGC
TCTCAAATAGGCTGCCTAGTTTACATGGTGATTAATGTATGTTGGAAGGG
CTTCATCTGTCTTTTACAGCTCTTAAGCTCTAGGTGCGTGTTTATATAAA
TTggcgaacaatattcgacaagaTGTTTGCGGACCATAATTCATGAAGTA
AATAATAGGCGGTTCTCtgttataaaaaggaattttctttctgaaaGCAC
CCCCCCTATTTTATTTGGGgcaattgggccattccattttctAACGATAC
AGGGAAtggacgaacttttccaggggctAATCTGAAgcaaaaactttctt
taatttttcagggggtaaaaaaatattctaaaactTTCAGGGGGTTAAAG
ACTGGTTTTAGTTGATCACCCTTACTTTTAAGGTATGAAGAAAACATTTC
CAAAGGTCTTGcatattttgccattttccagggggagggtcaagaattat
tttttttcttaaagagGTGCATTCACCCCCTGTATTGATTTAAAGTGGAA
CAGCCCATCGTGGTCAATATATTGTATATTGTAACCCTTTAGTTCTACAA
ATCTTGTGATTTTCCAAATGTTTTCGATATGGAGAGCTATGAGAGAATAT
TTGGCCTATAGACAAAAGtataagaacattgtaagaagaTTTATAACAac
attttcttaggaaattacaccaaaataaatacaaaatgatgaaaataaga
acaatggatattttagaattcttttaaaaaggTCTTAGAACTTTCCTTCT
CAAAAGGTTGTACTacacgtctttttataagagcaaattatatataagaa
cataagacttcgattgccaaaatgttaagaacaggCTAAGtgtattttaa
ggctttgcagactctaaatggccaatttcttaagaaaattgacCAAAGTG
CTCacgaaatggtgaaaataagaatatatgctaagaacatttttaggctt
gaagctaaaaaagttaagaacatccgaaggcttcaaaaatttaggatgtt
cttatttaaaatAAAACGTGTAATGTTGACGAGAAAGAATGTATAGTCTA
TCACTCATAACCATGTCTGTGGAGAAAGTAACACGtcgttttgacatttt
ctttcaatcAACTTAATCAATTTAAGCTTtacagtgaaaaaaaaatctca
atatagTCTTAGATCTGATTTAATATTGAcaaattttatcaaagaaaagt
tgaaatttttttaataatgtaGCATATATATGATTAACTGTAACATGTTA
AAATGCTACATAATCTTAAAAATTTAGTATATATACTGCATTCTTATGAA
CCCCCTCTATgggaatttgttttttaaaattgCTTTCCATCTATTGCTCT
CAGTTTTCCATGAAGATCAGAATGTACAGGAATATAAACCTTCAAATTAC
CGACTTTATTTGTAGTTGATCAATAAACGCCCTCTCCCACTTTTATCTAT
TTCTTTTGGAGAACTTTATGGATCCCTATTTCTACTAGGGCCCATCGATT
CGGGCTACGATGAGAATTGAACTGTTGATTAATCATTATGCACCTTTTTA
TATTAAAACTGGAAACTTTTGGCTGAGGTTCggctgtttttgtttttccg
aTTAAGATTTTAAATGCTCTTAAATTGTTCCTCGTTTATAAAAAAGGGGG
TAGCAACTGCGATTATAAACTCATCCGTACGGTCATTGTTGAAAAAAGTG
TCTCATTTTTTGTCTATGTAAAGTGACTCGTCAATAGTAATTGAGATTAA
AAACTGATGTCACTCTTTTACTAAAAAATAACCtacctctttaaaaaaat
tgctttgaatgATTTAATCTACTTTTAGGATGAGTGACAAGTCTGTTATT
ACGTCACCATCTATATATCTAAACTGCTACCACTCCGGTAGTCAAAGGCT
ATTTTTATGTTTCACTTGCTTTAAGTCGAAGACGatccgaaggctcctct
ttcggtAGCTGTCTACCGGACGTAGCGTCACTCTTTTCCCCTAATTTGTC
TGACTTACCTAGGACCCCTTCTCTTGTTGCTGAACCGGAGAAGTGTCAAG
TAACATTTTTTGCTAAGTATAAAGTCTTTGGCATGACCCGACCTCGCTTC
GAACCCAAGACTTTGCACTTCGCAACCGAGTACTTTACCTTTTCACTAAG
AAATAAGGGGAGAGACTTAGCTGTATTATAAGTCTCCAGCCAAAGTGTCC
CAGGCGGGATTTCTATACCCACGACACTGATTTCGCCATAACACTGGCGG
CGTGCGTATTCATTTAATTCATATAAATCCTTTTCTTTTTACAGATAAAT
TGGAGGAGGAAAGGAACCTATACGATAAAGTCAAAGGTGATCTCGACAAT
CTCCTGGCTGAGATCCAAAACTTGAATGTCTAAATGAACTATTAACTATT
GAATGACCACTGATTTCACAAATAAACAAAAGACCCAACATTTCAACAAT
GTAATTATCATTTTATTATGCATATTTTAAATTGTATGGTTTTAGTTACT
CTTTTAGTTGCTCTTATTGCTgctgttttgttgttgtttacaTGTTTGAA
TTTCATCTTTAGATTAGACCTCTCATAAAATAAACGTCATGAATACTTAC
CTCATTTGAAATAATGATGCAGCTGTCAaccatttaaaggttttgttttt
aagtaagagtgatatcgtttgcttactcatcaattttaattcacaagctt
tttcacattgaattgacacgaatgtggagcaagatcggtcagaaagagga
aaagaaaaacattttttgcttatatcagcataatataacaatagtaagac
actgtcctgaaatgaaatatgtgtctgatatgaaacgggaaaaaATGCAC
CTGATGCTTATAACATCCAAACAGTTTAGCATAATATCGCACTGCCTGGA
CCTCTCTAAACTAATTTTTTATTGCTAAGTTCAAaaatgttgtatttttt
actgtagTTGTTTTTATGAGCATTGTATCTATGTATTTTACTGTTTATGA
CCCCCTTAAATAAATTTAGCATCTTTTTTGTGAATGTATATATTccttat
ttgtttttttttctaaaaaatacttcaaataaTATTTATAAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063190-exon-scaffold_384-1491911889:89286..89555 | TCONS_00063190-exon-scaffold_384-1491911889:89286..89555 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1510915933:89286..89555 | TCONS_00063190-exon-scaffold_384-1510915933:89286..89555 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1575043694:89286..89555 | TCONS_00063190-exon-scaffold_384-1575043694:89286..89555 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1491911889:99777..100028 | TCONS_00063190-exon-scaffold_384-1491911889:99777..100028 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1510915933:99777..100028 | TCONS_00063190-exon-scaffold_384-1510915933:99777..100028 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1575043694:99777..100028 | TCONS_00063190-exon-scaffold_384-1575043694:99777..100028 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1491911889:100371..100441 | TCONS_00063190-exon-scaffold_384-1491911889:100371..100441 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1510915933:100371..100441 | TCONS_00063190-exon-scaffold_384-1510915933:100371..100441 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1575043694:100371..100441 | TCONS_00063190-exon-scaffold_384-1575043694:100371..100441 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1491911889:102223..102361 | TCONS_00063190-exon-scaffold_384-1491911889:102223..102361 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1510915933:102223..102361 | TCONS_00063190-exon-scaffold_384-1510915933:102223..102361 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1575043694:102223..102361 | TCONS_00063190-exon-scaffold_384-1575043694:102223..102361 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1491911889:103118..103187 | TCONS_00063190-exon-scaffold_384-1491911889:103118..103187 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1510915933:103118..103187 | TCONS_00063190-exon-scaffold_384-1510915933:103118..103187 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1575043694:103118..103187 | TCONS_00063190-exon-scaffold_384-1575043694:103118..103187 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1491911889:107880..108678 | TCONS_00063190-exon-scaffold_384-1491911889:107880..108678 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1510915933:107880..108678 | TCONS_00063190-exon-scaffold_384-1510915933:107880..108678 | Clytia hemisphaerica | exon |
| TCONS_00063190-exon-scaffold_384-1575043694:107880..108678 | TCONS_00063190-exon-scaffold_384-1575043694:107880..108678 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_384 | supercontig | scaffold_384:89286..108678 + |
Blast
BLAST of TCONS_00063190 vs. Swiss-Prot (Human)
Match: TPM1 (Tropomyosin alpha-1 chain OS=Homo sapiens GN=TPM1 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.899e-18 Identity = 69/233 (29.61%), Postives = 135/233 (57.94%), Query Frame = 1
Query: 166 IKKKMAILREKLEKAEERSKKAEDELQNSNNKAEESETEVGRLQKELGNLEDELDTSETKLAKITARLHEAEKQADESERARRVLEDRGQTDDDRLAKLQAEYEDVVSKNADVEDRYSQISSEIEDLERHLEDEEQKAVQAEEMSKTLDKTLTEVGNSLRLMERNDKDASEREDKLSSKLAAMKQTYTEAESRASKYEDHSKELESTLDDLQDKLEEERNLYDKVKGDLDNLL 864
++KK+ ++L+K E K A+++L+ + KA ++E +V L + + +E+ELD ++ +LA +L EAEK ADESER +V+E R Q D++++ + + ++ D + +Y +++ ++ +E LE E++A +E L++ L V N+L+ +E + S++ED+ ++ + EAE+RA E +LE ++DDL+D+L ++ Y + +LD+ L
Sbjct: 46 LQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDRYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHAL 278
The following BLAST results are available for this feature:
|
