TCONS_00063181 (transcript) - C. hemisphaerica

Overview
NameTCONS_00063181
Unique NameTCONS_00063181
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length217

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00063181 ID=TCONS_00063181|Name=TCONS_00063181|organism=Clytia hemisphaerica|type=transcript|length=217bp
GCcatttgtaattatttttaaaaaagtattattttcaACTCAATGAAGAG
AGAGAGTGATGAACCATCCCATCAGGGGAActaaaaatattagaatattc
TGTGTGGTAAGAAACCAGACTGTATGGAGTAAAGCCTTAGGGTTGGTTTT
GCCTAACTTTCTAACGTTCCAAAggatttcttcttctttgttAGTTAAAG
CACGGCTTGCTAGTCCA
Run BLAST on NCBI

transcript from alignment at scaffold_383:247617..247833

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00063181 ID=TCONS_00063181|Name=TCONS_00063181|organism=Clytia hemisphaerica|type=transcript|length=217bp|location=Sequence derived from alignment at scaffold_383:247617..247833 (Clytia hemisphaerica)
TGGACTAGCAAGCCGTGCTTTAACTaacaaagaagaagaaatccTTTGGA
ACGTTAGAAAGTTAGGCAAAACCAACCCTAAGGCTTTACTCCATACAGTC
TGGTTTCTTACCACACAgaatattctaatatttttagTTCCCCTGATGGG
ATGGTTCATCACTCTCTCTCTTCATTGAGTtgaaaataatacttttttaa
aaataattacaaatgGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_039588XLOC_039588Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00063181-exon-scaffold_383-1491911889:247617..247833TCONS_00063181-exon-scaffold_383-1491911889:247617..247833Clytia hemisphaericaexon
TCONS_00063181-exon-scaffold_383-1510915933:247617..247833TCONS_00063181-exon-scaffold_383-1510915933:247617..247833Clytia hemisphaericaexon
TCONS_00063181-exon-scaffold_383-1575043694:247617..247833TCONS_00063181-exon-scaffold_383-1575043694:247617..247833Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_383supercontigscaffold_383:247617..247833 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063181 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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