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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063138 ID=TCONS_00063138|Name=TCONS_00063138|organism=Clytia hemisphaerica|type=transcript|length=1100bp
attcaaaacagatcatcatttatttcaaaagttgactttatttatttgag
tatacttttttgcggAACACACTGTATTTAAGGTACTGCTCTGCAAATAC
TACTTAAACTGGATTAATTCATGAAACTAAGTCCACCACCCAAAAGTTTT
TTAAACTCTTCGGAGAAATTGCACAAATTTTTTTGGCTAAGGAATTTTGA
TCTTACGAAAATTAATCTGATTAAATTAGTCTTTTATTTATACAGGTCCA
TTTCGATTTTGATgtttcattgatttattttttgtagaACAAAAACCAAT
GTTCATCAAACAGCAGTGTAAGCAGGGATGTACTCAACCTTAGTGATTGT
CATTTATCTCAAGCGGTAAAAGTtgtgataatttttttgttatctatgta
caaaaattttctacaCAGCAAATTCCTATTTTCATGAAAGATCAATATTT
TCCTAAATCAAGAATGTTTCTTcttaaaataagcaaaacaAAGATTGTGT
TGTTTTATCATAGAATTACAAAATATACATTACGTCCTTAATTTAAGGAA
GGTATTTTGGCATCAAACatggtttaaaatttgaaaaatcggCAATTACG
CTTTCTCAAGTCGTTTATAGTGGTTTTCCAGGATTTTGAAAGTCCCGGAG
AGGTTTAGTCAAACACAAAAACACTTCTGCTTTGCATCTGGATTGTTTTG
GAGAGAGTTTGAGAGTTTCCAAAACCTCAAAACTGTGTTACGTCGAAAGA
GCCTTTAAAATGCTCAAAATTATGTTCCTAACCCTAAATTTTTGTCACAT
GaacacaaaataaacaaataaacaaatcatGTTTATCTCCAAATTTTCGG
CCGAAATTTTTTGTGCACCTTATTGAAAGCCTTTTCTTTTTACGCGTCTT
AGGACGATAGTATAAATACGGGACACTTTAGAAGGACTTCGTAAGGATGT
AAATAACATGCGAAAAGtaataagataaaaccttttaCTTTATCTAGACA
AATTGAAGACGAAAGCCGATTACAAAGAAATCGAGGAAGAGTATGAAAGA
GAAataaaagataaacttaaagGTAACATACTATTACATATTATCTATTT Run BLAST on NCBI transcript from alignment at scaffold_381:37053..38152 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063138 ID=TCONS_00063138|Name=TCONS_00063138|organism=Clytia hemisphaerica|type=transcript|length=1100bp|location=Sequence derived from alignment at scaffold_381:37053..38152 (Clytia hemisphaerica)
AAATAGATAATATGTAATAGTATGTTACctttaagtttatcttttatTTC
TCTTTCATACTCTTCCTCGATTTCTTTGTAATCGGCTTTCGTCTTCAATT
TGTCTAGATAAAGtaaaaggttttatcttattaCTTTTCGCATGTTATTT
ACATCCTTACGAAGTCCTTCTAAAGTGTCCCGTATTTATACTATCGTCCT
AAGACGCGTAAAAAGAAAAGGCTTTCAATAAGGTGCACAAAAAATTTCGG
CCGAAAATTTGGAGATAAACatgatttgtttatttgtttattttgtgttC
ATGTGACAAAAATTTAGGGTTAGGAACATAATTTTGAGCATTTTAAAGGC
TCTTTCGACGTAACACAGTTTTGAGGTTTTGGAAACTCTCAAACTCTCTC
CAAAACAATCCAGATGCAAAGCAGAAGTGTTTTTGTGTTTGACTAAACCT
CTCCGGGACTTTCAAAATCCTGGAAAACCACTATAAACGACTTGAGAAAG
CGTAATTGccgatttttcaaattttaaaccatGTTTGATGCCAAAATACC
TTCCTTAAATTAAGGACGTAATGTATATTTTGTAATTCTATGATAAAACA
ACACAATCTTtgttttgcttattttaagAAGAAACATTCTTGATTTAGGA
AAATATTGATCTTTCATGAAAATAGGAATTTGCTGtgtagaaaatttttg
tacatagataacaaaaaaattatcacaACTTTTACCGCTTGAGATAAATG
ACAATCACTAAGGTTGAGTACATCCCTGCTTACACTGCTGTTTGATGAAC
ATTGGTTTTTGTtctacaaaaaataaatcaatgaaacATCAAAATCGAAA
TGGACCTGTATAAATAAAAGACTAATTTAATCAGATTAATTTTCGTAAGA
TCAAAATTCCTTAGCCAAAAAAATTTGTGCAATTTCTCCGAAGAGTTTAA
AAAACTTTTGGGTGGTGGACTTAGTTTCATGAATTAATCCAGTTTAAGTA
GTATTTGCAGAGCAGTACCTTAAATACAGTGTGTTccgcaaaaaagtata
ctcaaataaataaagtcaacttttgaaataaatgatgatctgttttgaat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063138-exon-scaffold_381-1491911889:37053..38152 | TCONS_00063138-exon-scaffold_381-1491911889:37053..38152 | Clytia hemisphaerica | exon |
| TCONS_00063138-exon-scaffold_381-1510915933:37053..38152 | TCONS_00063138-exon-scaffold_381-1510915933:37053..38152 | Clytia hemisphaerica | exon |
| TCONS_00063138-exon-scaffold_381-1575043694:37053..38152 | TCONS_00063138-exon-scaffold_381-1575043694:37053..38152 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_381 | supercontig | scaffold_381:37053..38152 . |
Blast
The following BLAST results are available for this feature:
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