|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063135 ID=TCONS_00063135|Name=TCONS_00063135|organism=Clytia hemisphaerica|type=transcript|length=902bp
CTTTATTCATACATTGTTTTTGGCTTGGTTGGGACGTTgatatattcaaa
aaacaaacaaacttttatatggattatactttcactttttcatgtgATTG
TTgagattgaaagattttttgattatgtatggttataaacattcatgaca
tgttttaacactggcatctttgaaattttgttcgCTTGGTACGTTGGTAA
ATCTATAGTACAAGTGCAGTTTTTATGACAATATGACACAGCTGACACAG
ATTCCATGATTGCATTCAGGATACTCTTTGCAGGGAATGTTCAATATGTT
TATGCTCACATTCATTGGGTAACAGATCACTGCTTTTTCTATAGTACAAG
TTAAACTTGATAACCTTATCCCAGAGAATGTAACTCTGAAATGGCTACAG
AAATCCTCAAAAATTAAGATGGAAAGTATGGTATTTATGAAACATTTTTG
GTGGTGCGATACATGGTgtggaaatgatgaaaagtgaaagtggtaatttg
gaatttaaaaattgaatgctTTTTATACGAAAACAATATTCTGACAAGCT
GACCAGTGAGACACATCTTGGTTCTATTTGTgaatgaaaataacaacatt
ttCCATTGAGAAGACTGGTTTTCTGGGTTTTCGGATGCCCGGCCGTTGTT
TAGCTGGATTTCACTACCTTGAAATTGTTAGATGTACGAGGATGTTTTGG
GTTTTCACTACTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTT
CACTACTGGCAGACTTCcagggggcacttaggcaaaattaagTATGGGGA
CATGCCGCtgatcagggtccctttttcagacTCTAGAGATATATGATGCG
GT Run BLAST on NCBI transcript from alignment at scaffold_381:13023..13924 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063135 ID=TCONS_00063135|Name=TCONS_00063135|organism=Clytia hemisphaerica|type=transcript|length=902bp|location=Sequence derived from alignment at scaffold_381:13023..13924 (Clytia hemisphaerica)
ACCGCATCATATATCTCTAGAgtctgaaaaagggaccctgatcaGCGGCA
TGTCCCCATActtaattttgcctaagtgccccctgGAAGTCTGCCAGTAG
TGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCAGTAGTGAAA
ACCCAAAACATCCTCGTACATCTAACAATTTCAAGGTAGTGAAATCCAGC
TAAACAACGGCCGGGCATCCGAAAACCCAGAAAACCAGTCTTCTCAATGG
aaaatgttgttattttcattcACAAATAGAACCAAGATGTGTCTCACTGG
TCAGCTTGTCAGAATATTGTTTTCGTATAAAAagcattcaatttttaaat
tccaaattaccactttcacttttcatcatttccacACCATGTATCGCACC
ACCAAAAATGTTTCATAAATACCATACTTTCCATCTTAATTTTTGAGGAT
TTCTGTAGCCATTTCAGAGTTACATTCTCTGGGATAAGGTTATCAAGTTT
AACTTGTACTATAGAAAAAGCAGTGATCTGTTACCCAATGAATGTGAGCA
TAAACATATTGAACATTCCCTGCAAAGAGTATCCTGAATGCAATCATGGA
ATCTGTGTCAGCTGTGTCATATTGTCATAAAAACTGCACTTGTACTATAG
ATTTACCAACGTACCAAGcgaacaaaatttcaaagatgccagtgttaaaa
catgtcatgaatgtttataaccatacataatcaaaaaatctttcaatctc
AACAATcacatgaaaaagtgaaagtataatccatataaaagtttgtttgt
tttttgaatatatcAACGTCCCAACCAAGCCAAAAACAATGTATGAATAA
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063135-exon-scaffold_381-1491911889:13023..13924 | TCONS_00063135-exon-scaffold_381-1491911889:13023..13924 | Clytia hemisphaerica | exon |
| TCONS_00063135-exon-scaffold_381-1510915933:13023..13924 | TCONS_00063135-exon-scaffold_381-1510915933:13023..13924 | Clytia hemisphaerica | exon |
| TCONS_00063135-exon-scaffold_381-1575043694:13023..13924 | TCONS_00063135-exon-scaffold_381-1575043694:13023..13924 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_381 | supercontig | scaffold_381:13023..13924 . |
Blast
The following BLAST results are available for this feature:
|
