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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00063117 ID=TCONS_00063117|Name=TCONS_00063117|organism=Clytia hemisphaerica|type=transcript|length=1510bp
AAAAAATACTAACAacttaaaagaaattttacaaACGTCCTACCtaaata
tttttacatcaaaatcgTTAATACAGTTGACTtgctctaattcgattttc
aagggacaaagacttttcttcgaattagataaggattcgaattacagaga
gtgtTTTATACTGATTTCAGCCCCCGTAAAAATTCTCAATTTGTTTTTCT
TCCGAAAAAGAGTTTGACctaaaatattgtttttaaaatatcttcacAGC
TCGTAAACGTATTAAAGTTTATAAAAGGTACCTGAATTAGAAGCACATCT
CAGttcttctgttttttttttcaatcgcgAACATTGacccattccatttt
atatccatataCAAGgtggtggacgaacatttctgGGTAATCGGAGAAGA
ATTTCCTGggtttttttcatctttccaaGGGAGGGGGACGAAAGTGTGTC
CAAAATTTCCAGGGCGTGAAGCACTGATTTCAGTTCTTCTATCCTCACTT
TAAggcatgaaaagaattttttcaaggctttttaataaaattttccattt
tccagggggtattccaagaaaattgtttgatttgaaaaggTTCATCTagc
ccctgtatggaaattttctGCAACAGCCCTGCCATTTCTCACAAACTTAA
CTCGGAACCTTTTTCGGTACAACAACCACTTGtccattttttttcataat
cttCTTACCGTCTTTATAAGTGATTGAAATGCATTCTTGTTTTTCCCTCG
TGAACCAAACATATCTACAAAGAGTTCCCACGCaaacttttctcaaaaat
ctttcgATTGTCGTGTAACACCATAACTGACCCTTCTTGTCGTAAAGCGG
TCCGCTCTTTGTGCTTGTGCTTGAATTTAACGTTACTGCTCTGTTGTTAG
GTATCATTAGTTGGCTTTTTGGTACAGAAGTTGTACTTGAAGATACAGCT
CTTTTTCCCAAGGGTAGCTGCTCTGTCATCAGGAATAGATTCAACGCGAC
TACACAGCAAAACAATAAAGATAACTGCGGTGTCATATTTCAATGTTCCT
TTGATGGTCTAAAAATTTGTCTATAATTTCCTTCTCGTTCTTTCCACCCT
TGTCTTGGGAATCTCTTCTTTGATAGGGTTATGTGAGCGCTCGCGAAagt
aaaatagaaaagtttgtTTATAATTTCAGTTCAGTCTTCGTTCCTTTCAC
CTTGTCTTGGGAGCTTCTTTGATAGAGTTAATGGATGATGTGAAAGCGTT
TGCCAAAGTAAAGTATAAAAAATTTACGCTCAACCTTCACAATTGCCAGC
ATAATCTCTCAGTCAGATGATACCAAAGTTGTTATGCGTCACTTTATCCA
TGTGTGTAGGAATCTCATAGATGTATGATTTTCTTCCTCCTTTACTACAG
CTTTTTATATTGACCCAGCTGAGGGTATTCTCCACCCTCCCCCGTTGTGT
GTTTTGTAGCAAAGGTATACTCGAGAACACATTAAACATTTGAAACTTGT
GACATTTATG Run BLAST on NCBI transcript from alignment at scaffold_38:255514..257023 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00063117 ID=TCONS_00063117|Name=TCONS_00063117|organism=Clytia hemisphaerica|type=transcript|length=1510bp|location=Sequence derived from alignment at scaffold_38:255514..257023 (Clytia hemisphaerica)
CATAAATGTCACAAGTTTCAAATGTTTAATGTGTTCTCGAGTATACCTTT
GCTACAAAACACACAACGGGGGAGGGTGGAGAATACCCTCAGCTGGGTCA
ATATAAAAAGCTGTAGTAAAGGAGGAAGAAAATCATACATCTATGAGATT
CCTACACACATGGATAAAGTGACGCATAACAACTTTGGTATCATCTGACT
GAGAGATTATGCTGGCAATTGTGAAGGTTGAGCGTAAATTTTTTATACTT
TACTTTGGCAAACGCTTTCACATCATCCATTAACTCTATCAAAGAAGCTC
CCAAGACAAGGTGAAAGGAACGAAGACTGAACTGAAATTATAAacaaact
tttctattttactTTCGCGAGCGCTCACATAACCCTATCAAAGAAGAGAT
TCCCAAGACAAGGGTGGAAAGAACGAGAAGGAAATTATAGACAAATTTTT
AGACCATCAAAGGAACATTGAAATATGACACCGCAGTTATCTTTATTGTT
TTGCTGTGTAGTCGCGTTGAATCTATTCCTGATGACAGAGCAGCTACCCT
TGGGAAAAAGAGCTGTATCTTCAAGTACAACTTCTGTACCAAAAAGCCAA
CTAATGATACCTAACAACAGAGCAGTAACGTTAAATTCAAGCACAAGCAC
AAAGAGCGGACCGCTTTACGACAAGAAGGGTCAGTTATGGTGTTACACGA
CAATcgaaagatttttgagaaaagtttGCGTGGGAACTCTTTGTAGATAT
GTTTGGTTCACGAGGGAAAAACAAGAATGCATTTCAATCACTTATAAAGA
CGGTAAGaagattatgaaaaaaaatggaCAAGTGGTTGTTGTACCGAAAA
AGGTTCCGAGTTAAGTTTGTGAGAAATGGCAGGGCTGTTGCagaaaattt
ccatacaggggctAGATGAAccttttcaaatcaaacaattttcttggaat
accccctggaaaatggaaaattttattaaaaagccttgaaaaaattcttt
tcatgccTTAAAGTGAGGATAGAAGAACTGAAATCAGTGCTTCACGCCCT
GGAAATTTTGGACACACTTTCGTCCCCCTCCCttggaaagatgaaaaaaa
ccCAGGAAATTCTTCTCCGATTACCcagaaatgttcgtccaccacCTTGt
atatggatataaaatggaatgggtCAATGTTcgcgattgaaaaaaaaaac
agaagaaCTGAGATGTGCTTCTAATTCAGGTACCTTTTATAAACTTTAAT
ACGTTTACGAGCTgtgaagatattttaaaaacaatattttagGTCAAACT
CTTTTTCGGAAGAAAAACAAATTGAGAATTTTTACGGGGGCTGAAATCAG
TATAAAacactctctgtaattcgaatccttatctaattcgaagaaaagtc
tttgtcccttgaaaatcgaattagagcaAGTCAACTGTATTAAcgatttt
gatgtaaaaatatttaGGTAGGACGTttgtaaaatttcttttaagtTGTT
AGTATTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00063117-exon-scaffold_38-1491911889:255514..257023 | TCONS_00063117-exon-scaffold_38-1491911889:255514..257023 | Clytia hemisphaerica | exon |
| TCONS_00063117-exon-scaffold_38-1510915933:255514..257023 | TCONS_00063117-exon-scaffold_38-1510915933:255514..257023 | Clytia hemisphaerica | exon |
| TCONS_00063117-exon-scaffold_38-1575043694:255514..257023 | TCONS_00063117-exon-scaffold_38-1575043694:255514..257023 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_38 | supercontig | scaffold_38:255514..257023 . |
Blast
The following BLAST results are available for this feature:
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